RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 KPNB1Q14974 876 aaKnown RBP18.54■□□□□ 0.56
COL18A1-204ENST00000400337 TMPRSS6Q8IU80 811 aa18.54■□□□□ 0.56
COL18A1-204ENST00000400337 TMCO5AQ8N6Q1 288 aa18.54■□□□□ 0.56
COL18A1-204ENST00000400337 TBC1D23Q9NUY8 699 aa18.54■□□□□ 0.56
COL18A1-204ENST00000400337 LOC102724159A0A0B4J2E5 919 aa18.54■□□□□ 0.56
COL18A1-204ENST00000400337 BTNL10A8MVZ5 291 aa18.54■□□□□ 0.56
COL18A1-204ENST00000400337 MEI4A8MW99 385 aa18.54■□□□□ 0.56
COL18A1-204ENST00000400337 PSMC3P17980 439 aa18.54■□□□□ 0.56
COL18A1-204ENST00000400337 GRK3P35626 688 aa18.54■□□□□ 0.56
COL18A1-204ENST00000400337 PWP2Q15269 919 aaKnown RBP18.54■□□□□ 0.56
COL18A1-204ENST00000400337 SPDYCQ5MJ68 293 aa18.54■□□□□ 0.56
COL18A1-204ENST00000400337 C16orf46Q6P387 395 aa18.54■□□□□ 0.56
COL18A1-204ENST00000400337 PHF13Q86YI8 300 aaPredicted RBP18.54■□□□□ 0.56
COL18A1-204ENST00000400337 PHF21AQ96BD5 680 aa18.54■□□□□ 0.56
COL18A1-204ENST00000400337 KDM4FA0A1W2PPD8 638 aa18.54■□□□□ 0.56
COL18A1-204ENST00000400337 CHADO15335 359 aa18.54■□□□□ 0.56
COL18A1-204ENST00000400337 TRMT5Q32P41 509 aaKnown RBP18.54■□□□□ 0.56
COL18A1-204ENST00000400337 TTMPQ5BVD1 217 aa18.54■□□□□ 0.56
COL18A1-204ENST00000400337 RIPOR1Q6ZS17 1223 aa18.54■□□□□ 0.56
COL18A1-204ENST00000400337 EIF1ADQ8N9N8 165 aaKnown RBP18.54■□□□□ 0.56
COL18A1-204ENST00000400337 PDP2Q9P2J9 529 aa18.54■□□□□ 0.56
COL18A1-204ENST00000400337 VTI1BQ9UEU0 232 aa18.54■□□□□ 0.56
COL18A1-204ENST00000400337 ANKRD6Q9Y2G4 727 aa18.54■□□□□ 0.56
COL18A1-204ENST00000400337 TRIM17Q9Y577 477 aa18.54■□□□□ 0.56
COL18A1-204ENST00000400337 RPA3P35244 121 aaPredicted RBP18.54■□□□□ 0.56
COL18A1-204ENST00000400337 MRPS6P82932 125 aaKnown RBP18.54■□□□□ 0.56
COL18A1-204ENST00000400337 ZCWPW2Q504Y3 356 aa18.54■□□□□ 0.56
COL18A1-204ENST00000400337 IYDQ6PHW0 289 aa18.54■□□□□ 0.56
COL18A1-204ENST00000400337 PSTKQ8IV42 348 aaKnown RBP18.54■□□□□ 0.56
COL18A1-204ENST00000400337 MED8Q96G25 268 aa18.54■□□□□ 0.56
COL18A1-204ENST00000400337 SH3GL1Q99961 368 aa18.54■□□□□ 0.56
COL18A1-204ENST00000400337 POLR1EQ9GZS1 481 aaKnown RBP18.54■□□□□ 0.56
COL18A1-204ENST00000400337 DPP7Q9UHL4 492 aa18.54■□□□□ 0.56
COL18A1-204ENST00000400337 RAD51BO15315 384 aa18.53■□□□□ 0.56
COL18A1-204ENST00000400337 RPL22P35268 128 aaKnown RBP18.53■□□□□ 0.56
COL18A1-204ENST00000400337 HYIQ5T013 277 aa18.53■□□□□ 0.56
COL18A1-204ENST00000400337 ANKS6Q68DC2 871 aa18.53■□□□□ 0.56
COL18A1-204ENST00000400337 TRMT11Q7Z4G4 463 aaKnown RBP18.53■□□□□ 0.56
COL18A1-204ENST00000400337 FAM120BQ96EK7 910 aaKnown RBP18.53■□□□□ 0.56
COL18A1-204ENST00000400337 RNF157Q96PX1 679 aa18.53■□□□□ 0.56
COL18A1-204ENST00000400337 SEPT3Q9UH03 358 aa18.53■□□□□ 0.56
COL18A1-204ENST00000400337 SLC15A5A6NIM6 579 aa18.53■□□□□ 0.56
COL18A1-204ENST00000400337 FMO4P31512 558 aa18.53■□□□□ 0.56
COL18A1-204ENST00000400337 TREML2Q5T2D2 321 aa18.53■□□□□ 0.56
COL18A1-204ENST00000400337 LPPQ93052 612 aa18.53■□□□□ 0.56
COL18A1-204ENST00000400337 TMEM159Q96B96 161 aa18.53■□□□□ 0.56
COL18A1-204ENST00000400337 SPACA6W5XKT8 324 aa18.53■□□□□ 0.56
COL18A1-204ENST00000400337 A0A0B4J269 797 aa18.53■□□□□ 0.56
COL18A1-204ENST00000400337 FKBP6O75344 327 aa18.53■□□□□ 0.56
COL18A1-204ENST00000400337 SLC16A1P53985 500 aa18.53■□□□□ 0.56
COL18A1-204ENST00000400337 BCL2L1Q07817 233 aa18.53■□□□□ 0.56
COL18A1-204ENST00000400337 IZUMO2Q6UXV1 221 aa18.53■□□□□ 0.56
COL18A1-204ENST00000400337 ALLCQ8N6M5 410 aa18.53■□□□□ 0.56
COL18A1-204ENST00000400337 FNDC5Q8NAU1 212 aa18.53■□□□□ 0.56
COL18A1-204ENST00000400337 KCTD14Q9BQ13 255 aaPredicted RBP18.53■□□□□ 0.56
COL18A1-204ENST00000400337 DPY30Q9C005 99 aa18.53■□□□□ 0.56
COL18A1-204ENST00000400337 C2CD2Q9Y426 696 aa18.53■□□□□ 0.56
COL18A1-204ENST00000400337 A8MX80 341 aa18.53■□□□□ 0.56
COL18A1-204ENST00000400337 BTN3A1O00481 513 aa18.53■□□□□ 0.56
COL18A1-204ENST00000400337 IGSF6O95976 241 aa18.53■□□□□ 0.56
COL18A1-204ENST00000400337 SERPINH1P50454 418 aaKnown RBP18.53■□□□□ 0.56
COL18A1-204ENST00000400337 RTP1P59025 263 aa18.53■□□□□ 0.56
COL18A1-204ENST00000400337 ALDH6A1Q02252 535 aaKnown RBP18.53■□□□□ 0.56
COL18A1-204ENST00000400337 OLFML2BQ68BL8 750 aa18.53■□□□□ 0.56
COL18A1-204ENST00000400337 ANKRD52Q8NB46 1076 aa18.53■□□□□ 0.56
COL18A1-204ENST00000400337 BTN2A2Q8WVV5 523 aa18.53■□□□□ 0.56
COL18A1-204ENST00000400337 TUBGCP4Q9UGJ1 667 aa18.53■□□□□ 0.56
COL18A1-204ENST00000400337 HNRNPH3P31942 346 aaKnown RBP18.52■□□□□ 0.56
COL18A1-204ENST00000400337 NAB1Q13506 487 aa18.52■□□□□ 0.56
COL18A1-204ENST00000400337 SCARA3Q6AZY7 606 aa18.52■□□□□ 0.56
COL18A1-204ENST00000400337 C12orf29Q8N999 325 aa18.52■□□□□ 0.56
COL18A1-204ENST00000400337 ZBTB10Q96DT7 871 aa18.52■□□□□ 0.56
COL18A1-204ENST00000400337 BTBD10Q9BSF8 475 aa18.52■□□□□ 0.56
COL18A1-204ENST00000400337 FGFBP2Q9BYJ0 223 aa18.52■□□□□ 0.56
COL18A1-204ENST00000400337 KLHL4Q9C0H6 718 aa18.52■□□□□ 0.56
COL18A1-204ENST00000400337 RNF208Q9H0X6 261 aa18.52■□□□□ 0.56
COL18A1-204ENST00000400337 NRDE2Q9H7Z3 1164 aa18.52■□□□□ 0.56
COL18A1-204ENST00000400337 UXTQ9UBK9 157 aaPredicted RBP18.52■□□□□ 0.56
COL18A1-204ENST00000400337 TPP1O14773 563 aa18.52■□□□□ 0.56
COL18A1-204ENST00000400337 ALADP13716 330 aa18.52■□□□□ 0.56
COL18A1-204ENST00000400337 CDK7P50613 346 aa18.52■□□□□ 0.56
COL18A1-204ENST00000400337 ANXA11P50995 505 aaKnown RBP18.52■□□□□ 0.56
COL18A1-204ENST00000400337 PRKAA2P54646 552 aa18.52■□□□□ 0.56
COL18A1-204ENST00000400337 SFSWAPQ12872 951 aaKnown RBP18.52■□□□□ 0.56
COL18A1-204ENST00000400337 TCHHL1Q5QJ38 904 aaPredicted RBP18.52■□□□□ 0.56
COL18A1-204ENST00000400337 NEPROQ6NW34 567 aa18.52■□□□□ 0.56
COL18A1-204ENST00000400337 ZBTB49Q6ZSB9 765 aa18.52■□□□□ 0.56
COL18A1-204ENST00000400337 TMEM114B3SHH9 223 aa18.52■□□□□ 0.56
COL18A1-204ENST00000400337 MAP2K7O14733 419 aa18.52■□□□□ 0.56
COL18A1-204ENST00000400337 CBX6O95503 412 aa18.52■□□□□ 0.56
COL18A1-204ENST00000400337 ATP6V1G2O95670 118 aa18.52■□□□□ 0.56
COL18A1-204ENST00000400337 AMHP03971 560 aa18.52■□□□□ 0.56
COL18A1-204ENST00000400337 CYP2A7P20853 494 aa18.52■□□□□ 0.56
COL18A1-204ENST00000400337 SYTL1Q8IYJ3 562 aa18.52■□□□□ 0.56
COL18A1-204ENST00000400337 METTL6Q8TCB7 284 aa18.52■□□□□ 0.56
COL18A1-204ENST00000400337 LENG9Q96B70 501 aa18.52■□□□□ 0.56
COL18A1-204ENST00000400337 MYLK2Q9H1R3 596 aa18.52■□□□□ 0.56
COL18A1-204ENST00000400337 POMKQ9H5K3 350 aa18.52■□□□□ 0.56
COL18A1-204ENST00000400337 LRRC19Q9H756 370 aa18.52■□□□□ 0.56
COL18A1-204ENST00000400337 MYPNQ86TC9 1320 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms