RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 NDUFAF2Q8N183 169 aa18.16■□□□□ 0.5
HLA-DQB1-204ENST00000399084 ARHGAP18Q8N392 663 aa18.16■□□□□ 0.5
HLA-DQB1-204ENST00000399084 DQX1Q8TE96 717 aaKnown RBP18.16■□□□□ 0.5
HLA-DQB1-204ENST00000399084 TEKT5Q96M29 485 aa18.16■□□□□ 0.5
HLA-DQB1-204ENST00000399084 PAAF1Q9BRP4 392 aa18.16■□□□□ 0.5
HLA-DQB1-204ENST00000399084 LRMDAQ9H2I8 198 aa18.16■□□□□ 0.5
HLA-DQB1-204ENST00000399084 NSMCE4AQ9NXX6 385 aa18.16■□□□□ 0.5
HLA-DQB1-204ENST00000399084 SEPT10Q9P0V9 454 aa18.16■□□□□ 0.5
HLA-DQB1-204ENST00000399084 FAM237BA0A1B0GVD1 139 aa18.15■□□□□ 0.5
HLA-DQB1-204ENST00000399084 CACNG3O60359 315 aa18.15■□□□□ 0.5
HLA-DQB1-204ENST00000399084 GLRA3O75311 464 aa18.15■□□□□ 0.5
HLA-DQB1-204ENST00000399084 USP1O94782 785 aa18.15■□□□□ 0.5
HLA-DQB1-204ENST00000399084 LRIG2O94898 1065 aa18.15■□□□□ 0.5
HLA-DQB1-204ENST00000399084 SLC2A3P11169 496 aa18.15■□□□□ 0.5
HLA-DQB1-204ENST00000399084 MGAT1P26572 445 aa18.15■□□□□ 0.5
HLA-DQB1-204ENST00000399084 CCR1P32246 355 aa18.15■□□□□ 0.5
HLA-DQB1-204ENST00000399084 GP5P40197 560 aa18.15■□□□□ 0.5
HLA-DQB1-204ENST00000399084 YWHAHQ04917 246 aaPredicted RBP18.15■□□□□ 0.5
HLA-DQB1-204ENST00000399084 FAM91A1Q658Y4 838 aa18.15■□□□□ 0.5
HLA-DQB1-204ENST00000399084 NAPEPLDQ6IQ20 393 aa18.15■□□□□ 0.5
HLA-DQB1-204ENST00000399084 CCDC117Q8IWD4 279 aaPredicted RBP18.15■□□□□ 0.5
HLA-DQB1-204ENST00000399084 URGCPQ8TCY9 931 aa18.15■□□□□ 0.5
HLA-DQB1-204ENST00000399084 RNF34Q969K3 372 aa18.15■□□□□ 0.5
HLA-DQB1-204ENST00000399084 ERP27Q96DN0 273 aa18.15■□□□□ 0.5
HLA-DQB1-204ENST00000399084 FTHL17Q9BXU8 183 aa18.15■□□□□ 0.5
HLA-DQB1-204ENST00000399084 IL22Q9GZX6 179 aa18.15■□□□□ 0.5
HLA-DQB1-204ENST00000399084 SMOC2Q9H3U7 446 aa18.15■□□□□ 0.5
HLA-DQB1-204ENST00000399084 AAR2Q9Y312 384 aaKnown RBP18.15■□□□□ 0.5
HLA-DQB1-204ENST00000399084 TDRD15B5MCY1 1934 aaKnown RBP18.15■□□□□ 0.5
HLA-DQB1-204ENST00000399084 IRAK2O43187 625 aa18.15■□□□□ 0.5
HLA-DQB1-204ENST00000399084 SRGAP2BP0DMP2 458 aa18.15■□□□□ 0.5
HLA-DQB1-204ENST00000399084 PRKAR2AP13861 404 aaKnown RBP18.15■□□□□ 0.5
HLA-DQB1-204ENST00000399084 BRCC3P46736 316 aa18.15■□□□□ 0.5
HLA-DQB1-204ENST00000399084 SWT1Q5T5J6 900 aaKnown RBP18.15■□□□□ 0.5
HLA-DQB1-204ENST00000399084 BTBD8Q5XKL5 378 aa18.15■□□□□ 0.5
HLA-DQB1-204ENST00000399084 PACS1Q6VY07 963 aa18.15■□□□□ 0.5
HLA-DQB1-204ENST00000399084 TBC1D1Q86TI0 1168 aaPredicted RBP18.15■□□□□ 0.5
HLA-DQB1-204ENST00000399084 TAC4Q86UU9 113 aa18.15■□□□□ 0.5
HLA-DQB1-204ENST00000399084 STKLD1Q8NE28 680 aa18.15■□□□□ 0.5
HLA-DQB1-204ENST00000399084 E2F7Q96AV8 911 aa18.15■□□□□ 0.5
HLA-DQB1-204ENST00000399084 ARHGAP39Q9C0H5 1083 aa18.15■□□□□ 0.5
HLA-DQB1-204ENST00000399084 MYLK2Q9H1R3 596 aa18.15■□□□□ 0.5
HLA-DQB1-204ENST00000399084 TMPRSS4Q9NRS4 437 aa18.15■□□□□ 0.5
HLA-DQB1-204ENST00000399084 KCNK4Q9NYG8 393 aa18.15■□□□□ 0.5
HLA-DQB1-204ENST00000399084 CACNG4Q9UBN1 327 aa18.15■□□□□ 0.5
HLA-DQB1-204ENST00000399084 VANGL2Q9ULK5 521 aa18.15■□□□□ 0.5
HLA-DQB1-204ENST00000399084 HMX2A2RU54 273 aa18.14■□□□□ 0.49
HLA-DQB1-204ENST00000399084 WDR91A4D1P6 747 aa18.14■□□□□ 0.49
HLA-DQB1-204ENST00000399084 TNFRSF10BO14763 440 aa18.14■□□□□ 0.49
HLA-DQB1-204ENST00000399084 ARFIP2P53365 341 aa18.14■□□□□ 0.49
HLA-DQB1-204ENST00000399084 SESN2P58004 480 aaPredicted RBP18.14■□□□□ 0.49
HLA-DQB1-204ENST00000399084 DSC1Q08554 894 aa18.14■□□□□ 0.49
HLA-DQB1-204ENST00000399084 SF3A3Q12874 501 aaKnown RBP eCLIP18.14■□□□□ 0.49
HLA-DQB1-204ENST00000399084 MTA1Q13330 715 aa18.14■□□□□ 0.49
HLA-DQB1-204ENST00000399084 MAP3K21Q5TCX8 1036 aa18.14■□□□□ 0.49
HLA-DQB1-204ENST00000399084 MROH9Q5TGP6 573 aa18.14■□□□□ 0.49
HLA-DQB1-204ENST00000399084 NUDCD3Q8IVD9 361 aa18.14■□□□□ 0.49
HLA-DQB1-204ENST00000399084 ADAM32Q8TC27 787 aa18.14■□□□□ 0.49
HLA-DQB1-204ENST00000399084 LRRN4Q8WUT4 740 aa18.14■□□□□ 0.49
HLA-DQB1-204ENST00000399084 EDEM1Q92611 657 aa18.14■□□□□ 0.49
HLA-DQB1-204ENST00000399084 DPF3Q92784 378 aa18.14■□□□□ 0.49
HLA-DQB1-204ENST00000399084 ISL2Q96A47 359 aa18.14■□□□□ 0.49
HLA-DQB1-204ENST00000399084 CERS2Q96G23 380 aa18.14■□□□□ 0.49
HLA-DQB1-204ENST00000399084 C1orf74Q96LT6 269 aa18.14■□□□□ 0.49
HLA-DQB1-204ENST00000399084 GLT1D1Q96MS3 346 aa18.14■□□□□ 0.49
HLA-DQB1-204ENST00000399084 FBXO44Q9H4M3 255 aa18.14■□□□□ 0.49
HLA-DQB1-204ENST00000399084 FAM96AQ9H5X1 160 aa18.14■□□□□ 0.49
HLA-DQB1-204ENST00000399084 NPHS2Q9NP85 383 aa18.14■□□□□ 0.49
HLA-DQB1-204ENST00000399084 ANLNQ9NQW6 1124 aa18.14■□□□□ 0.49
HLA-DQB1-204ENST00000399084 ZFATQ9P243 1243 aa18.14■□□□□ 0.49
HLA-DQB1-204ENST00000399084 LNPEPQ9UIQ6 1025 aa18.14■□□□□ 0.49
HLA-DQB1-204ENST00000399084 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.13■□□□□ 0.49
HLA-DQB1-204ENST00000399084 I6L893 689 aaPredicted RBP18.13■□□□□ 0.49
HLA-DQB1-204ENST00000399084 KCNK1O00180 336 aa18.13■□□□□ 0.49
HLA-DQB1-204ENST00000399084 ANXA9O76027 345 aa18.13■□□□□ 0.49
HLA-DQB1-204ENST00000399084 BPGMP07738 259 aa18.13■□□□□ 0.49
HLA-DQB1-204ENST00000399084 SPRP35270 261 aaPredicted RBP18.13■□□□□ 0.49
HLA-DQB1-204ENST00000399084 ACLYP53396 1101 aa18.13■□□□□ 0.49
HLA-DQB1-204ENST00000399084 SP3Q02447 781 aa18.13■□□□□ 0.49
HLA-DQB1-204ENST00000399084 NOGQ13253 232 aa18.13■□□□□ 0.49
HLA-DQB1-204ENST00000399084 TIGD7Q6NT04 549 aaPredicted RBP18.13■□□□□ 0.49
HLA-DQB1-204ENST00000399084 LRRTM3Q86VH5 581 aa18.13■□□□□ 0.49
HLA-DQB1-204ENST00000399084 LCA5Q86VQ0 697 aa18.13■□□□□ 0.49
HLA-DQB1-204ENST00000399084 MON1AQ86VX9 555 aa18.13■□□□□ 0.49
HLA-DQB1-204ENST00000399084 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.13■□□□□ 0.49
HLA-DQB1-204ENST00000399084 OR10T2Q8NGX3 314 aa18.13■□□□□ 0.49
HLA-DQB1-204ENST00000399084 FATE1Q969F0 183 aa18.13■□□□□ 0.49
HLA-DQB1-204ENST00000399084 ZFP69BQ9UJL9 534 aa18.13■□□□□ 0.49
HLA-DQB1-204ENST00000399084 ABT1Q9ULW3 272 aaKnown RBP18.13■□□□□ 0.49
HLA-DQB1-204ENST00000399084 RPS6KL1Q9Y6S9 549 aa18.13■□□□□ 0.49
HLA-DQB1-204ENST00000399084 TMEM88BA6NKF7 163 aa18.12■□□□□ 0.49
HLA-DQB1-204ENST00000399084 SYN3O14994 580 aa18.12■□□□□ 0.49
HLA-DQB1-204ENST00000399084 ZBTB24O43167 697 aaPredicted RBP18.12■□□□□ 0.49
HLA-DQB1-204ENST00000399084 GNRH1P01148 92 aa18.12■□□□□ 0.49
HLA-DQB1-204ENST00000399084 DLDP09622 509 aaKnown RBP18.12■□□□□ 0.49
HLA-DQB1-204ENST00000399084 DNAJB1P25685 340 aa18.12■□□□□ 0.49
HLA-DQB1-204ENST00000399084 CCND3P30281 292 aaPredicted RBP18.12■□□□□ 0.49
HLA-DQB1-204ENST00000399084 MAGEA11P43364 429 aa18.12■□□□□ 0.49
HLA-DQB1-204ENST00000399084 CDK7P50613 346 aa18.12■□□□□ 0.49
HLA-DQB1-204ENST00000399084 MNAT1P51948 309 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms