RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 SPNS2Q8IVW8 549 aa10.13□□□□□ -0.79
PTCHD4-202ENST00000398738 LILRA2Q8N149 483 aa10.13□□□□□ -0.79
PTCHD4-202ENST00000398738 MYO1HQ8N1T3 1032 aa10.13□□□□□ -0.79
PTCHD4-202ENST00000398738 HEXIM2Q96MH2 286 aaKnown RBP10.13□□□□□ -0.79
PTCHD4-202ENST00000398738 WRNIP1Q96S55 665 aa10.13□□□□□ -0.79
PTCHD4-202ENST00000398738 CGRRF1Q99675 332 aa10.13□□□□□ -0.79
PTCHD4-202ENST00000398738 NTPCRQ9BSD7 190 aaKnown RBP10.13□□□□□ -0.79
PTCHD4-202ENST00000398738 NUF2Q9BZD4 464 aa10.13□□□□□ -0.79
PTCHD4-202ENST00000398738 NIF3L1Q9GZT8 377 aa10.13□□□□□ -0.79
PTCHD4-202ENST00000398738 RSAD1Q9HA92 442 aa10.13□□□□□ -0.79
PTCHD4-202ENST00000398738 C20orf96Q9NUD7 363 aaPredicted RBP10.13□□□□□ -0.79
PTCHD4-202ENST00000398738 EMCNQ9ULC0 261 aa10.13□□□□□ -0.79
PTCHD4-202ENST00000398738 PSMD13Q9UNM6 376 aa10.13□□□□□ -0.79
PTCHD4-202ENST00000398738 SYNJ2BP-COX16A0A087WUM0 186 aa10.12□□□□□ -0.79
PTCHD4-202ENST00000398738 TCRBV5S1A1TA0A578 114 aa10.12□□□□□ -0.79
PTCHD4-202ENST00000398738 STRNO43815 780 aa10.12□□□□□ -0.79
PTCHD4-202ENST00000398738 USP12O75317 370 aa10.12□□□□□ -0.79
PTCHD4-202ENST00000398738 SPAG6O75602 509 aa10.12□□□□□ -0.79
PTCHD4-202ENST00000398738 ALDOAP04075 364 aaKnown RBP10.12□□□□□ -0.79
PTCHD4-202ENST00000398738 PDGFRBP09619 1106 aa10.12□□□□□ -0.79
PTCHD4-202ENST00000398738 PTPN1P18031 435 aaKnown RBP10.12□□□□□ -0.79
PTCHD4-202ENST00000398738 GRM5P41594 1212 aa10.12□□□□□ -0.79
PTCHD4-202ENST00000398738 PHKA2P46019 1235 aa10.12□□□□□ -0.79
PTCHD4-202ENST00000398738 HSD17B4P51659 736 aa10.12□□□□□ -0.79
PTCHD4-202ENST00000398738 GBE1Q04446 702 aa10.12□□□□□ -0.79
PTCHD4-202ENST00000398738 CBX3Q13185 183 aa10.12□□□□□ -0.79
PTCHD4-202ENST00000398738 NOMO1Q15155 1222 aa10.12□□□□□ -0.79
PTCHD4-202ENST00000398738 KRT80Q6KB66 452 aa10.12□□□□□ -0.79
PTCHD4-202ENST00000398738 PGM2L1Q6PCE3 622 aa10.12□□□□□ -0.79
PTCHD4-202ENST00000398738 LAYNQ6UX15 382 aa10.12□□□□□ -0.79
PTCHD4-202ENST00000398738 CYP2R1Q6VVX0 501 aa10.12□□□□□ -0.79
PTCHD4-202ENST00000398738 PODNQ7Z5L7 613 aa10.12□□□□□ -0.79
PTCHD4-202ENST00000398738 PLD5Q8N7P1 536 aa10.12□□□□□ -0.79
PTCHD4-202ENST00000398738 PPWD1Q96BP3 646 aaKnown RBP10.12□□□□□ -0.79
PTCHD4-202ENST00000398738 AGAP3Q96P47 875 aa10.12□□□□□ -0.79
PTCHD4-202ENST00000398738 SENP6Q9GZR1 1112 aaPredicted RBP10.12□□□□□ -0.79
PTCHD4-202ENST00000398738 XPNPEP3Q9NQH7 507 aa10.12□□□□□ -0.79
PTCHD4-202ENST00000398738 COX16Q9P0S2 106 aa10.12□□□□□ -0.79
PTCHD4-202ENST00000398738 ARHGAP28Q9P2N2 729 aa10.12□□□□□ -0.79
PTCHD4-202ENST00000398738 ITGA11Q9UKX5 1188 aa10.12□□□□□ -0.79
PTCHD4-202ENST00000398738 TBC1D30Q9Y2I9 924 aa10.12□□□□□ -0.79
PTCHD4-202ENST00000398738 TMX2-CTNND1H3BSU7 103 aa10.12□□□□□ -0.79
PTCHD4-202ENST00000398738 PLIN3O60664 434 aa10.12□□□□□ -0.79
PTCHD4-202ENST00000398738 LYPLA2O95372 231 aa10.12□□□□□ -0.79
PTCHD4-202ENST00000398738 ASS1P00966 412 aaKnown RBP10.12□□□□□ -0.79
PTCHD4-202ENST00000398738 C1QAP02745 245 aa10.12□□□□□ -0.79
PTCHD4-202ENST00000398738 SERPINE1P05121 402 aa10.12□□□□□ -0.79
PTCHD4-202ENST00000398738 CHRNGP07510 517 aa10.12□□□□□ -0.79
PTCHD4-202ENST00000398738 HOXA10P31260 410 aaPredicted RBP10.12□□□□□ -0.79
PTCHD4-202ENST00000398738 GLRBP48167 497 aa10.12□□□□□ -0.79
PTCHD4-202ENST00000398738 ENTPD1P49961 510 aa10.12□□□□□ -0.79
PTCHD4-202ENST00000398738 ATXN1P54253 815 aaKnown RBP10.12□□□□□ -0.79
PTCHD4-202ENST00000398738 FSTL1Q12841 308 aa10.12□□□□□ -0.79
PTCHD4-202ENST00000398738 SLC10A2Q12908 348 aaPredicted RBP10.12□□□□□ -0.79
PTCHD4-202ENST00000398738 ART3Q13508 389 aa10.12□□□□□ -0.79
PTCHD4-202ENST00000398738 PCLAFQ15004 111 aa10.12□□□□□ -0.79
PTCHD4-202ENST00000398738 ANKDD1AQ495B1 522 aa10.12□□□□□ -0.79
PTCHD4-202ENST00000398738 ANKRD23Q86SG2 305 aa10.12□□□□□ -0.79
PTCHD4-202ENST00000398738 ADGRG6Q86SQ4 1221 aa10.12□□□□□ -0.79
PTCHD4-202ENST00000398738 PCDH20Q8N6Y1 951 aaKnown RBP10.12□□□□□ -0.79
PTCHD4-202ENST00000398738 RNF169Q8NCN4 708 aa10.12□□□□□ -0.79
PTCHD4-202ENST00000398738 TWNKQ96RR1 684 aa10.12□□□□□ -0.79
PTCHD4-202ENST00000398738 TRPV6Q9H1D0 765 aa10.12□□□□□ -0.79
PTCHD4-202ENST00000398738 FEM1BQ9UK73 627 aa10.12□□□□□ -0.79
PTCHD4-202ENST00000398738 ZNF510Q9Y2H8 683 aa10.12□□□□□ -0.79
PTCHD4-202ENST00000398738 RIPK3Q9Y572 518 aa10.12□□□□□ -0.79
PTCHD4-202ENST00000398738 ZNFX1Q9P2E3 1918 aaKnown RBP10.12□□□□□ -0.79
PTCHD4-202ENST00000398738 MYO18AQ92614 2054 aaKnown RBP10.12□□□□□ -0.79
PTCHD4-202ENST00000398738 CHADO15335 359 aa10.12□□□□□ -0.79
PTCHD4-202ENST00000398738 ZNF189O75820 626 aaPredicted RBP10.12□□□□□ -0.79
PTCHD4-202ENST00000398738 PSMC3P17980 439 aa10.12□□□□□ -0.79
PTCHD4-202ENST00000398738 MPSTP25325 297 aa10.12□□□□□ -0.79
PTCHD4-202ENST00000398738 SH3BGRP55822 239 aaPredicted RBP10.12□□□□□ -0.79
PTCHD4-202ENST00000398738 ABCE1P61221 599 aaKnown RBP10.12□□□□□ -0.79
PTCHD4-202ENST00000398738 NAA20P61599 178 aa10.12□□□□□ -0.79
PTCHD4-202ENST00000398738 YWHAEP62258 255 aaKnown RBP10.12□□□□□ -0.79
PTCHD4-202ENST00000398738 SLC44A4Q53GD3 710 aa10.12□□□□□ -0.79
PTCHD4-202ENST00000398738 FAM160B2Q86V87 743 aa10.12□□□□□ -0.79
PTCHD4-202ENST00000398738 DSELQ8IZU8 1212 aa10.12□□□□□ -0.79
PTCHD4-202ENST00000398738 PLD6Q8N2A8 252 aaKnown RBP10.12□□□□□ -0.79
PTCHD4-202ENST00000398738 PQLC3Q8N755 202 aa10.12□□□□□ -0.79
PTCHD4-202ENST00000398738 DIS3LQ8TF46 1054 aaKnown RBP10.12□□□□□ -0.79
PTCHD4-202ENST00000398738 ATP6V1E2Q96A05 226 aa10.12□□□□□ -0.79
PTCHD4-202ENST00000398738 WNK4Q96J92 1243 aa10.12□□□□□ -0.79
PTCHD4-202ENST00000398738 SORT1Q99523 831 aa10.12□□□□□ -0.79
PTCHD4-202ENST00000398738 NPAS2Q99743 824 aa10.12□□□□□ -0.79
PTCHD4-202ENST00000398738 EBNA1BP2Q99848 306 aaKnown RBP10.12□□□□□ -0.79
PTCHD4-202ENST00000398738 PCDHAC1Q9H158 963 aa10.12□□□□□ -0.79
PTCHD4-202ENST00000398738 IL21Q9HBE4 155 aa10.12□□□□□ -0.79
PTCHD4-202ENST00000398738 FAM49BQ9NUQ9 324 aa10.12□□□□□ -0.79
PTCHD4-202ENST00000398738 DMTF1Q9Y222 760 aa10.12□□□□□ -0.79
PTCHD4-202ENST00000398738 HES2Q9Y543 173 aa10.12□□□□□ -0.79
PTCHD4-202ENST00000398738 APOL1O14791 398 aa10.11□□□□□ -0.79
PTCHD4-202ENST00000398738 XPOTO43592 962 aaKnown RBP10.11□□□□□ -0.79
PTCHD4-202ENST00000398738 GSRP00390 522 aa10.11□□□□□ -0.79
PTCHD4-202ENST00000398738 CPA3P15088 417 aa10.11□□□□□ -0.79
PTCHD4-202ENST00000398738 MGAT1P26572 445 aa10.11□□□□□ -0.79
PTCHD4-202ENST00000398738 SFNP31947 248 aa10.11□□□□□ -0.79
PTCHD4-202ENST00000398738 GABRB2P47870 512 aa10.11□□□□□ -0.79
PTCHD4-202ENST00000398738 MTTPP55157 894 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms