RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 ETFBP38117 255 aa24.22■■□□□ 1.47
TSPAN4-202ENST00000397396 NDST2P52849 883 aa24.22■■□□□ 1.47
TSPAN4-202ENST00000397396 OXCT1P55809 520 aa24.22■■□□□ 1.47
TSPAN4-202ENST00000397396 PDK1Q15118 436 aa24.22■■□□□ 1.47
TSPAN4-202ENST00000397396 PDGFRLQ15198 375 aa24.22■■□□□ 1.47
TSPAN4-202ENST00000397396 PUS10Q3MIT2 529 aaKnown RBP24.22■■□□□ 1.47
TSPAN4-202ENST00000397396 POTEHQ6S545 545 aa24.22■■□□□ 1.47
TSPAN4-202ENST00000397396 SETD3Q86TU7 594 aaPredicted RBP24.22■■□□□ 1.47
TSPAN4-202ENST00000397396 UMODL1-AS1Q8N2C9 162 aa24.22■■□□□ 1.47
TSPAN4-202ENST00000397396 NKD2Q969F2 451 aaPredicted RBP24.22■■□□□ 1.47
TSPAN4-202ENST00000397396 DTLQ9NZJ0 730 aa24.22■■□□□ 1.47
TSPAN4-202ENST00000397396 NR2E1Q9Y466 385 aa24.22■■□□□ 1.47
TSPAN4-202ENST00000397396 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP24.21■■□□□ 1.47
TSPAN4-202ENST00000397396 RIOK3O14730 519 aaKnown RBP24.21■■□□□ 1.47
TSPAN4-202ENST00000397396 LIASO43766 372 aa24.21■■□□□ 1.47
TSPAN4-202ENST00000397396 MFSD11O43934 449 aa24.21■■□□□ 1.47
TSPAN4-202ENST00000397396 TSPAN3O60637 253 aa24.21■■□□□ 1.47
TSPAN4-202ENST00000397396 ECI2O75521 394 aa24.21■■□□□ 1.47
TSPAN4-202ENST00000397396 NFATC1O95644 943 aa24.21■■□□□ 1.47
TSPAN4-202ENST00000397396 PECAM1P16284 738 aaPredicted RBP24.21■■□□□ 1.47
TSPAN4-202ENST00000397396 FCARP24071 287 aa24.21■■□□□ 1.47
TSPAN4-202ENST00000397396 OR1E1P30953 314 aa24.21■■□□□ 1.47
TSPAN4-202ENST00000397396 VIPR2P41587 438 aa24.21■■□□□ 1.47
TSPAN4-202ENST00000397396 VCPP55072 806 aaKnown RBP24.21■■□□□ 1.47
TSPAN4-202ENST00000397396 YBEYP58557 167 aaPredicted RBP24.21■■□□□ 1.47
TSPAN4-202ENST00000397396 EIF3EP60228 445 aaKnown RBP24.21■■□□□ 1.47
TSPAN4-202ENST00000397396 C2orf54Q08AI8 447 aa24.21■■□□□ 1.47
TSPAN4-202ENST00000397396 ZNF177Q13360 481 aaPredicted RBP24.21■■□□□ 1.47
TSPAN4-202ENST00000397396 BYSLQ13895 437 aaKnown RBP24.21■■□□□ 1.47
TSPAN4-202ENST00000397396 ARTNQ5T4W7 220 aa24.21■■□□□ 1.47
TSPAN4-202ENST00000397396 CDKL3Q8IVW4 592 aaPredicted RBP24.21■■□□□ 1.47
TSPAN4-202ENST00000397396 MFSD6LQ8IWD5 586 aa24.21■■□□□ 1.47
TSPAN4-202ENST00000397396 YAF2Q8IY57 180 aa24.21■■□□□ 1.47
TSPAN4-202ENST00000397396 MMGT1Q8N4V1 131 aa24.21■■□□□ 1.47
TSPAN4-202ENST00000397396 CCDC26Q8TAB7 109 aa24.21■■□□□ 1.47
TSPAN4-202ENST00000397396 SLC35B2Q8TB61 432 aa24.21■■□□□ 1.47
TSPAN4-202ENST00000397396 DDI1Q8WTU0 396 aa24.21■■□□□ 1.47
TSPAN4-202ENST00000397396 C1orf54Q8WWF1 131 aa24.21■■□□□ 1.47
TSPAN4-202ENST00000397396 SPHK2Q9NRA0 654 aa24.21■■□□□ 1.47
TSPAN4-202ENST00000397396 DUS2Q9NX74 493 aaKnown RBP24.21■■□□□ 1.47
TSPAN4-202ENST00000397396 R3HDM2Q9Y2K5 976 aaKnown RBP24.21■■□□□ 1.47
TSPAN4-202ENST00000397396 CFAP69A5D8W1 941 aa24.2■■□□□ 1.46
TSPAN4-202ENST00000397396 GRXCR2A6NFK2 248 aa24.2■■□□□ 1.46
TSPAN4-202ENST00000397396 RAMP2O60895 175 aa24.2■■□□□ 1.46
TSPAN4-202ENST00000397396 TBL1XO60907 577 aa24.2■■□□□ 1.46
TSPAN4-202ENST00000397396 CNTN5O94779 1100 aa24.2■■□□□ 1.46
TSPAN4-202ENST00000397396 RPS24P62847 133 aaKnown RBP24.2■■□□□ 1.46
TSPAN4-202ENST00000397396 GBE1Q04446 702 aa24.2■■□□□ 1.46
TSPAN4-202ENST00000397396 ZNF33AQ06730 810 aa24.2■■□□□ 1.46
TSPAN4-202ENST00000397396 DHX34Q14147 1143 aaKnown RBP24.2■■□□□ 1.46
TSPAN4-202ENST00000397396 LEXMQ3ZCV2 418 aa24.2■■□□□ 1.46
TSPAN4-202ENST00000397396 PARP15Q460N3 678 aa24.2■■□□□ 1.46
TSPAN4-202ENST00000397396 ALFQ53S48 1182 aa24.2■■□□□ 1.46
TSPAN4-202ENST00000397396 ZNF783Q6ZMS7 281 aa24.2■■□□□ 1.46
TSPAN4-202ENST00000397396 MAATS1Q7Z4T9 603 aa24.2■■□□□ 1.46
TSPAN4-202ENST00000397396 TFAP2DQ7Z6R9 452 aa24.2■■□□□ 1.46
TSPAN4-202ENST00000397396 ZDHHC14Q8IZN3 488 aa24.2■■□□□ 1.46
TSPAN4-202ENST00000397396 RIN3Q8TB24 985 aa24.2■■□□□ 1.46
TSPAN4-202ENST00000397396 PPM1EQ8WY54 764 aa24.2■■□□□ 1.46
TSPAN4-202ENST00000397396 ATP2A3Q93084 1043 aa24.2■■□□□ 1.46
TSPAN4-202ENST00000397396 OLFM3Q96PB7 478 aa24.2■■□□□ 1.46
TSPAN4-202ENST00000397396 MARK1Q9P0L2 795 aa24.2■■□□□ 1.46
TSPAN4-202ENST00000397396 DRG1Q9Y295 367 aaKnown RBP24.2■■□□□ 1.46
TSPAN4-202ENST00000397396 EFCAB8A8MWE9 144 aa24.19■■□□□ 1.46
TSPAN4-202ENST00000397396 TRDMT1O14717 391 aaKnown RBP24.19■■□□□ 1.46
TSPAN4-202ENST00000397396 SCAMP3O14828 347 aaKnown RBP24.19■■□□□ 1.46
TSPAN4-202ENST00000397396 ADH1CP00326 375 aa24.19■■□□□ 1.46
TSPAN4-202ENST00000397396 RBP3P10745 1247 aa24.19■■□□□ 1.46
TSPAN4-202ENST00000397396 COILP38432 576 aaPredicted RBP24.19■■□□□ 1.46
TSPAN4-202ENST00000397396 FCHO2Q0JRZ9 810 aa24.19■■□□□ 1.46
TSPAN4-202ENST00000397396 CDH18Q13634 790 aa24.19■■□□□ 1.46
TSPAN4-202ENST00000397396 GLE1Q53GS7 698 aaKnown RBP24.19■■□□□ 1.46
TSPAN4-202ENST00000397396 CCDC137Q6PK04 289 aaKnown RBP24.19■■□□□ 1.46
TSPAN4-202ENST00000397396 NPNTQ6UXI9 565 aa24.19■■□□□ 1.46
TSPAN4-202ENST00000397396 CCDC105Q8IYK2 499 aa24.19■■□□□ 1.46
TSPAN4-202ENST00000397396 CFAP52Q8N1V2 620 aa24.19■■□□□ 1.46
TSPAN4-202ENST00000397396 PLCD3Q8N3E9 789 aa24.19■■□□□ 1.46
TSPAN4-202ENST00000397396 ATL2Q8NHH9 583 aa24.19■■□□□ 1.46
TSPAN4-202ENST00000397396 ATG4AQ8WYN0 398 aa24.19■■□□□ 1.46
TSPAN4-202ENST00000397396 IRF7Q92985 503 aa24.19■■□□□ 1.46
TSPAN4-202ENST00000397396 PHF7Q9BWX1 381 aaPredicted RBP24.19■■□□□ 1.46
TSPAN4-202ENST00000397396 PCYOX1Q9UHG3 505 aa24.19■■□□□ 1.46
TSPAN4-202ENST00000397396 WNT6Q9Y6F9 365 aa24.19■■□□□ 1.46
TSPAN4-202ENST00000397396 ILVBLA1L0T0 632 aa24.18■■□□□ 1.46
TSPAN4-202ENST00000397396 ARHGAP42A6NI28 874 aa24.18■■□□□ 1.46
TSPAN4-202ENST00000397396 H0Y626 953 aa24.18■■□□□ 1.46
TSPAN4-202ENST00000397396 H7C0C1 242 aa24.18■■□□□ 1.46
TSPAN4-202ENST00000397396 MTSS1O43312 755 aa24.18■■□□□ 1.46
TSPAN4-202ENST00000397396 LUC7L3O95232 432 aaKnown RBP24.18■■□□□ 1.46
TSPAN4-202ENST00000397396 ITGAVP06756 1048 aa24.18■■□□□ 1.46
TSPAN4-202ENST00000397396 RHOCP08134 193 aa24.18■■□□□ 1.46
TSPAN4-202ENST00000397396 PSMC3P17980 439 aa24.18■■□□□ 1.46
TSPAN4-202ENST00000397396 ATP5OP48047 213 aa24.18■■□□□ 1.46
TSPAN4-202ENST00000397396 GALNT2Q10471 571 aa24.18■■□□□ 1.46
TSPAN4-202ENST00000397396 AFMIDQ63HM1 303 aa24.18■■□□□ 1.46
TSPAN4-202ENST00000397396 RNF43Q68DV7 783 aa24.18■■□□□ 1.46
TSPAN4-202ENST00000397396 TANGO2Q6ICL3 276 aa24.18■■□□□ 1.46
TSPAN4-202ENST00000397396 TPGS1Q6ZTW0 290 aa24.18■■□□□ 1.46
TSPAN4-202ENST00000397396 SYDE1Q6ZW31 735 aaPredicted RBP24.18■■□□□ 1.46
TSPAN4-202ENST00000397396 KLHL7Q8IXQ5 586 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms