RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 KCTD13Q8WZ19 329 aa9.11□□□□□ -0.95
CAPN3-208ENST00000397204 NDRG1Q92597 394 aaKnown RBP9.11□□□□□ -0.95
CAPN3-208ENST00000397204 TTC17Q96AE7 1141 aa9.11□□□□□ -0.95
CAPN3-208ENST00000397204 KCTD15Q96SI1 283 aaPredicted RBP9.11□□□□□ -0.95
CAPN3-208ENST00000397204 MMRN2Q9H8L6 949 aa9.11□□□□□ -0.95
CAPN3-208ENST00000397204 CNGB3Q9NQW8 809 aa9.11□□□□□ -0.95
CAPN3-208ENST00000397204 GGA2Q9UJY4 613 aa9.11□□□□□ -0.95
CAPN3-208ENST00000397204 MAPK8IP1Q9UQF2 711 aa9.11□□□□□ -0.95
CAPN3-208ENST00000397204 COQ4Q9Y3A0 265 aa9.11□□□□□ -0.95
CAPN3-208ENST00000397204 SLCO1B1Q9Y6L6 691 aa9.11□□□□□ -0.95
CAPN3-208ENST00000397204 ADAMTS20P59510 1910 aa9.11□□□□□ -0.95
CAPN3-208ENST00000397204 NUMA1Q14980 2115 aa9.1□□□□□ -0.95
CAPN3-208ENST00000397204 CFAP46Q8IYW2 2715 aa9.1□□□□□ -0.95
CAPN3-208ENST00000397204 A0A1W2PPC4 97 aa9.1□□□□□ -0.95
CAPN3-208ENST00000397204 YJEFN3A6XGL0 299 aa9.1□□□□□ -0.95
CAPN3-208ENST00000397204 E7ENQ6 273 aa9.1□□□□□ -0.95
CAPN3-208ENST00000397204 H0Y8X5 98 aa9.1□□□□□ -0.95
CAPN3-208ENST00000397204 TULP2O00295 520 aa9.1□□□□□ -0.95
CAPN3-208ENST00000397204 KCNK3O14649 394 aa9.1□□□□□ -0.95
CAPN3-208ENST00000397204 VILLO15195 856 aa9.1□□□□□ -0.95
CAPN3-208ENST00000397204 RNASEH1O60930 286 aaKnown RBP9.1□□□□□ -0.95
CAPN3-208ENST00000397204 ASLP04424 464 aa9.1□□□□□ -0.95
CAPN3-208ENST00000397204 HSP90AA1P07900 732 aaKnown RBP9.1□□□□□ -0.95
CAPN3-208ENST00000397204 C1SP09871 688 aa9.1□□□□□ -0.95
CAPN3-208ENST00000397204 VDRP11473 427 aa9.1□□□□□ -0.95
CAPN3-208ENST00000397204 SNRPBP14678 240 aaKnown RBP9.1□□□□□ -0.95
CAPN3-208ENST00000397204 SYKP43405 635 aa9.1□□□□□ -0.95
CAPN3-208ENST00000397204 SLC11A2P49281 568 aa9.1□□□□□ -0.95
CAPN3-208ENST00000397204 MXI1P50539 228 aa9.1□□□□□ -0.95
CAPN3-208ENST00000397204 C21orf59P57076 290 aa9.1□□□□□ -0.95
CAPN3-208ENST00000397204 ST8SIA6P61647 398 aa9.1□□□□□ -0.95
CAPN3-208ENST00000397204 YWHAEP62258 255 aaKnown RBP9.1□□□□□ -0.95
CAPN3-208ENST00000397204 BST2Q10589 180 aaKnown RBP9.1□□□□□ -0.95
CAPN3-208ENST00000397204 DPYDQ12882 1025 aa9.1□□□□□ -0.95
CAPN3-208ENST00000397204 ZCWPW2Q504Y3 356 aa9.1□□□□□ -0.95
CAPN3-208ENST00000397204 PIK3R6Q5UE93 754 aa9.1□□□□□ -0.95
CAPN3-208ENST00000397204 ZNF776Q68DI1 518 aaPredicted RBP9.1□□□□□ -0.95
CAPN3-208ENST00000397204 ADAT2Q7Z6V5 191 aaKnown RBP9.1□□□□□ -0.95
CAPN3-208ENST00000397204 CCDC116Q8IYX3 515 aa9.1□□□□□ -0.95
CAPN3-208ENST00000397204 SIX6OS1Q8N1H7 587 aa9.1□□□□□ -0.95
CAPN3-208ENST00000397204 FIBINQ8TAL6 211 aa9.1□□□□□ -0.95
CAPN3-208ENST00000397204 IRGQQ8WZA9 623 aa9.1□□□□□ -0.95
CAPN3-208ENST00000397204 EDEM1Q92611 657 aa9.1□□□□□ -0.95
CAPN3-208ENST00000397204 ZNF775Q96BV0 537 aaPredicted RBP9.1□□□□□ -0.95
CAPN3-208ENST00000397204 LRIG1Q96JA1 1093 aa9.1□□□□□ -0.95
CAPN3-208ENST00000397204 DDX50Q9BQ39 737 aaKnown RBP9.1□□□□□ -0.95
CAPN3-208ENST00000397204 ORAI3Q9BRQ5 295 aa9.1□□□□□ -0.95
CAPN3-208ENST00000397204 ACE2Q9BYF1 805 aaPredicted RBP9.1□□□□□ -0.95
CAPN3-208ENST00000397204 RSPH9Q9H1X1 276 aaPredicted RBP9.1□□□□□ -0.95
CAPN3-208ENST00000397204 SFMBT1Q9UHJ3 866 aa9.1□□□□□ -0.95
CAPN3-208ENST00000397204 TSPAN16Q9UKR8 245 aa9.1□□□□□ -0.95
CAPN3-208ENST00000397204 PCDHGA1Q9Y5H4 931 aa9.1□□□□□ -0.95
CAPN3-208ENST00000397204 PLXNB3Q9ULL4 1909 aa9.09□□□□□ -0.95
CAPN3-208ENST00000397204 A0A1B0GTQ1 180 aa9.09□□□□□ -0.95
CAPN3-208ENST00000397204 TARSL2A2RTX5 802 aaKnown RBP9.09□□□□□ -0.95
CAPN3-208ENST00000397204 EIF4E1BA6NMX2 242 aaKnown RBP9.09□□□□□ -0.95
CAPN3-208ENST00000397204 ACSL4O60488 711 aa9.09□□□□□ -0.95
CAPN3-208ENST00000397204 TBL1XO60907 577 aa9.09□□□□□ -0.95
CAPN3-208ENST00000397204 IGHV4-34P06331 123 aa9.09□□□□□ -0.95
CAPN3-208ENST00000397204 SETSIPP0DME0 302 aa9.09□□□□□ -0.95
CAPN3-208ENST00000397204 EPB41P11171 864 aaKnown RBP9.09□□□□□ -0.95
CAPN3-208ENST00000397204 JUPP14923 745 aa9.09□□□□□ -0.95
CAPN3-208ENST00000397204 NDUFA8P51970 172 aa9.09□□□□□ -0.95
CAPN3-208ENST00000397204 GALCP54803 685 aa9.09□□□□□ -0.95
CAPN3-208ENST00000397204 DAOAP59103 153 aa9.09□□□□□ -0.95
CAPN3-208ENST00000397204 ADIGQ0VDE8 80 aa9.09□□□□□ -0.95
CAPN3-208ENST00000397204 CUL2Q13617 745 aa9.09□□□□□ -0.95
CAPN3-208ENST00000397204 GOLGA7BQ2TAP0 167 aa9.09□□□□□ -0.95
CAPN3-208ENST00000397204 HNRNPA1L2Q32P51 320 aaKnown RBP9.09□□□□□ -0.95
CAPN3-208ENST00000397204 KCNT1Q5JUK3 1230 aa9.09□□□□□ -0.95
CAPN3-208ENST00000397204 NUGGCQ68CJ6 796 aa9.09□□□□□ -0.95
CAPN3-208ENST00000397204 KIAA0895LQ68EN5 471 aa9.09□□□□□ -0.95
CAPN3-208ENST00000397204 MSANTD2Q6P1R3 559 aa9.09□□□□□ -0.95
CAPN3-208ENST00000397204 LCLAT1Q6UWP7 414 aa9.09□□□□□ -0.95
CAPN3-208ENST00000397204 KRBA2Q6ZNG9 492 aa9.09□□□□□ -0.95
CAPN3-208ENST00000397204 ZC3H3Q8IXZ2 948 aaKnown RBP9.09□□□□□ -0.95
CAPN3-208ENST00000397204 ZNF366Q8N895 744 aa9.09□□□□□ -0.95
CAPN3-208ENST00000397204 UBA3Q8TBC4 463 aa9.09□□□□□ -0.95
CAPN3-208ENST00000397204 GANCQ8TET4 914 aa9.09□□□□□ -0.95
CAPN3-208ENST00000397204 SLC35F5Q8WV83 523 aa9.09□□□□□ -0.95
CAPN3-208ENST00000397204 LMLNQ96KR4 655 aa9.09□□□□□ -0.95
CAPN3-208ENST00000397204 SPATA32Q96LK8 384 aa9.09□□□□□ -0.95
CAPN3-208ENST00000397204 ELF4Q99607 663 aaPredicted RBP9.09□□□□□ -0.95
CAPN3-208ENST00000397204 PABPC3Q9H361 631 aaKnown RBP9.09□□□□□ -0.95
CAPN3-208ENST00000397204 FBXL12Q9NXK8 326 aa9.09□□□□□ -0.95
CAPN3-208ENST00000397204 FTSJ1Q9UET6 329 aa9.09□□□□□ -0.95
CAPN3-208ENST00000397204 ADAMTS1Q9UHI8 967 aa9.09□□□□□ -0.95
CAPN3-208ENST00000397204 TPX2Q9ULW0 747 aaKnown RBP9.09□□□□□ -0.95
CAPN3-208ENST00000397204 ASH1LQ9NR48 2969 aaKnown RBP9.08□□□□□ -0.96
CAPN3-208ENST00000397204 GOLGA6L7A0A1B0GV03 622 aa9.08□□□□□ -0.96
CAPN3-208ENST00000397204 LRRC72A6NJI9 287 aa9.08□□□□□ -0.96
CAPN3-208ENST00000397204 O00370 1275 aa9.08□□□□□ -0.96
CAPN3-208ENST00000397204 YKT6O15498 198 aa9.08□□□□□ -0.96
CAPN3-208ENST00000397204 LDOC1O95751 146 aaPredicted RBP9.08□□□□□ -0.96
CAPN3-208ENST00000397204 IGLV3-27P01718 113 aa9.08□□□□□ -0.96
CAPN3-208ENST00000397204 CD19P15391 556 aa9.08□□□□□ -0.96
CAPN3-208ENST00000397204 CD70P32970 193 aa9.08□□□□□ -0.96
CAPN3-208ENST00000397204 CCR5P51681 352 aa9.08□□□□□ -0.96
CAPN3-208ENST00000397204 CNGA2Q16280 664 aa9.08□□□□□ -0.96
CAPN3-208ENST00000397204 MRPL14Q6P1L8 145 aaKnown RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms