RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 ZNF668Q96K58 619 aaPredicted RBP9.39□□□□□ -0.91
CAPN3-206ENST00000397163 LENG8Q96PV6 779 aaPredicted RBP9.39□□□□□ -0.91
CAPN3-206ENST00000397163 ELOVL4Q9GZR5 314 aa9.39□□□□□ -0.91
CAPN3-206ENST00000397163 COPS7BQ9H9Q2 264 aaPredicted RBP9.39□□□□□ -0.91
CAPN3-206ENST00000397163 TIMMDC1Q9NPL8 285 aa9.39□□□□□ -0.91
CAPN3-206ENST00000397163 ZNF358Q9NW07 568 aa9.39□□□□□ -0.91
CAPN3-206ENST00000397163 STK39Q9UEW8 545 aa9.39□□□□□ -0.91
CAPN3-206ENST00000397163 CPSF3Q9UKF6 684 aaKnown RBP9.39□□□□□ -0.91
CAPN3-206ENST00000397163 RAB26Q9ULW5 256 aa9.39□□□□□ -0.91
CAPN3-206ENST00000397163 CDY2AQ9Y6F7 541 aa9.39□□□□□ -0.91
CAPN3-206ENST00000397163 CDY1Q9Y6F8 540 aa9.39□□□□□ -0.91
CAPN3-206ENST00000397163 ANKRD31Q8N7Z5 1873 aa9.39□□□□□ -0.91
CAPN3-206ENST00000397163 ZNF195O14628 629 aa9.39□□□□□ -0.91
CAPN3-206ENST00000397163 PRKCBP05771 671 aa9.39□□□□□ -0.91
CAPN3-206ENST00000397163 TPSB2P20231 275 aa9.39□□□□□ -0.91
CAPN3-206ENST00000397163 RPL10P27635 214 aaKnown RBP9.39□□□□□ -0.91
CAPN3-206ENST00000397163 GPD2P43304 727 aa9.39□□□□□ -0.91
CAPN3-206ENST00000397163 RGS7P49802 495 aa9.39□□□□□ -0.91
CAPN3-206ENST00000397163 TPSAB1Q15661 275 aa9.39□□□□□ -0.91
CAPN3-206ENST00000397163 SLC9B1Q4ZJI4 515 aa9.39□□□□□ -0.91
CAPN3-206ENST00000397163 FAM183BPQ6ZVS7 135 aa9.39□□□□□ -0.91
CAPN3-206ENST00000397163 C14orf80Q86SX3 495 aa9.39□□□□□ -0.91
CAPN3-206ENST00000397163 TMEM176AQ96HP8 235 aa9.39□□□□□ -0.91
CAPN3-206ENST00000397163 PPP1R36Q96LQ0 422 aa9.39□□□□□ -0.91
CAPN3-206ENST00000397163 ACO2Q99798 780 aaKnown RBP9.39□□□□□ -0.91
CAPN3-206ENST00000397163 SNRNP25Q9BV90 132 aaKnown RBP9.39□□□□□ -0.91
CAPN3-206ENST00000397163 MAFBQ9Y5Q3 323 aaPredicted RBP9.39□□□□□ -0.91
CAPN3-206ENST00000397163 NR2E3Q9Y5X4 410 aa9.39□□□□□ -0.91
CAPN3-206ENST00000397163 GOLGA8QA0A0J9YX86 632 aa9.39□□□□□ -0.91
CAPN3-206ENST00000397163 GOLGA8OA6NCC3 632 aa9.39□□□□□ -0.91
CAPN3-206ENST00000397163 SPATA31C2B4DYI2 1134 aa9.39□□□□□ -0.91
CAPN3-206ENST00000397163 GOLGA8NF8WBI6 632 aa9.39□□□□□ -0.91
CAPN3-206ENST00000397163 NEMP1O14524 444 aa9.39□□□□□ -0.91
CAPN3-206ENST00000397163 MSCO60682 206 aa9.39□□□□□ -0.91
CAPN3-206ENST00000397163 ADAM23O75077 832 aa9.39□□□□□ -0.91
CAPN3-206ENST00000397163 DGKIO75912 1065 aa9.39□□□□□ -0.91
CAPN3-206ENST00000397163 PRDX6P30041 224 aa9.39□□□□□ -0.91
CAPN3-206ENST00000397163 EFNA5P52803 228 aa9.39□□□□□ -0.91
CAPN3-206ENST00000397163 GBE1Q04446 702 aa9.39□□□□□ -0.91
CAPN3-206ENST00000397163 ITGA7Q13683 1181 aa9.39□□□□□ -0.91
CAPN3-206ENST00000397163 ADGRE1Q14246 886 aa9.39□□□□□ -0.91
CAPN3-206ENST00000397163 C4orf22Q6V702 233 aa9.39□□□□□ -0.91
CAPN3-206ENST00000397163 FASTKD5Q7L8L6 764 aaKnown RBP9.39□□□□□ -0.91
CAPN3-206ENST00000397163 SNX32Q86XE0 403 aa9.39□□□□□ -0.91
CAPN3-206ENST00000397163 TNS4Q8IZW8 715 aa9.39□□□□□ -0.91
CAPN3-206ENST00000397163 AHI1Q8N157 1196 aa9.39□□□□□ -0.91
CAPN3-206ENST00000397163 ZNF781Q8N8C0 355 aa9.39□□□□□ -0.91
CAPN3-206ENST00000397163 RNF149Q8NC42 400 aa9.39□□□□□ -0.91
CAPN3-206ENST00000397163 CATSPER1Q8NEC5 780 aa9.39□□□□□ -0.91
CAPN3-206ENST00000397163 ATXN7L3BQ96GX2 97 aa9.39□□□□□ -0.91
CAPN3-206ENST00000397163 PPP1R10Q96QC0 940 aaKnown RBP9.39□□□□□ -0.91
CAPN3-206ENST00000397163 CDRT15Q96T59 188 aa9.39□□□□□ -0.91
CAPN3-206ENST00000397163 GNEQ9Y223 722 aaKnown RBP9.39□□□□□ -0.91
CAPN3-206ENST00000397163 PSAT1Q9Y617 370 aa9.39□□□□□ -0.91
CAPN3-206ENST00000397163 CROCCQ5TZA2 2017 aa9.38□□□□□ -0.91
CAPN3-206ENST00000397163 FBXO21O94952 628 aa9.38□□□□□ -0.91
CAPN3-206ENST00000397163 FAM58BPP0C7Q3 252 aa9.38□□□□□ -0.91
CAPN3-206ENST00000397163 CDH2P19022 906 aaPredicted RBP9.38□□□□□ -0.91
CAPN3-206ENST00000397163 CYP2F1P24903 491 aa9.38□□□□□ -0.91
CAPN3-206ENST00000397163 HARS2P49590 506 aaKnown RBP9.38□□□□□ -0.91
CAPN3-206ENST00000397163 PKNOX1P55347 436 aa9.38□□□□□ -0.91
CAPN3-206ENST00000397163 STILQ15468 1287 aa9.38□□□□□ -0.91
CAPN3-206ENST00000397163 CCDC14Q49A88 953 aa9.38□□□□□ -0.91
CAPN3-206ENST00000397163 HEATR6Q6AI08 1181 aaKnown RBP9.38□□□□□ -0.91
CAPN3-206ENST00000397163 SLC9A4Q6AI14 798 aa9.38□□□□□ -0.91
CAPN3-206ENST00000397163 OGFOD2Q6N063 350 aa9.38□□□□□ -0.91
CAPN3-206ENST00000397163 TMEM214Q6NUQ4 689 aaKnown RBP9.38□□□□□ -0.91
CAPN3-206ENST00000397163 C16orf89Q6UX73 402 aa9.38□□□□□ -0.91
CAPN3-206ENST00000397163 ZNF410Q86VK4 478 aa9.38□□□□□ -0.91
CAPN3-206ENST00000397163 IFNLR1Q8IU57 520 aaPredicted RBP9.38□□□□□ -0.91
CAPN3-206ENST00000397163 ZBTB8OSQ8IWT0 167 aa9.38□□□□□ -0.91
CAPN3-206ENST00000397163 RNF148Q8N7C7 305 aa9.38□□□□□ -0.91
CAPN3-206ENST00000397163 KCNN1Q92952 543 aa9.38□□□□□ -0.91
CAPN3-206ENST00000397163 CDH19Q9H159 772 aa9.38□□□□□ -0.91
CAPN3-206ENST00000397163 PRDM16Q9HAZ2 1276 aa9.38□□□□□ -0.91
CAPN3-206ENST00000397163 NRBP2Q9NSY0 501 aa9.38□□□□□ -0.91
CAPN3-206ENST00000397163 TRNAU1APQ9NX07 287 aaKnown RBP9.38□□□□□ -0.91
CAPN3-206ENST00000397163 TMEM98Q9Y2Y6 226 aa9.38□□□□□ -0.91
CAPN3-206ENST00000397163 NOP56O00567 594 aaKnown RBP9.38□□□□□ -0.91
CAPN3-206ENST00000397163 GCATO75600 419 aa9.38□□□□□ -0.91
CAPN3-206ENST00000397163 SERPINB7O75635 380 aa9.38□□□□□ -0.91
CAPN3-206ENST00000397163 THRAP10827 490 aa9.38□□□□□ -0.91
CAPN3-206ENST00000397163 DPEP1P16444 411 aa9.38□□□□□ -0.91
CAPN3-206ENST00000397163 XRCC1P18887 633 aaPredicted RBP9.38□□□□□ -0.91
CAPN3-206ENST00000397163 MGAT1P26572 445 aa9.38□□□□□ -0.91
CAPN3-206ENST00000397163 SDC4P31431 198 aa9.38□□□□□ -0.91
CAPN3-206ENST00000397163 THOP1P52888 689 aa9.38□□□□□ -0.91
CAPN3-206ENST00000397163 RELAQ04206 551 aa9.38□□□□□ -0.91
CAPN3-206ENST00000397163 SLC2A7Q6PXP3 512 aa9.38□□□□□ -0.91
CAPN3-206ENST00000397163 KCNT2Q6UVM3 1135 aa9.38□□□□□ -0.91
CAPN3-206ENST00000397163 CES3Q6UWW8 571 aa9.38□□□□□ -0.91
CAPN3-206ENST00000397163 BNC2Q6ZN30 1099 aaPredicted RBP9.38□□□□□ -0.91
CAPN3-206ENST00000397163 CMC1Q7Z7K0 106 aa9.38□□□□□ -0.91
CAPN3-206ENST00000397163 KYQ8NBH2 561 aa9.38□□□□□ -0.91
CAPN3-206ENST00000397163 DDI1Q8WTU0 396 aa9.38□□□□□ -0.91
CAPN3-206ENST00000397163 USP13Q92995 863 aaPredicted RBP9.38□□□□□ -0.91
CAPN3-206ENST00000397163 OR52B2Q96RD2 323 aa9.38□□□□□ -0.91
CAPN3-206ENST00000397163 TCF7L2Q9NQB0 619 aa9.38□□□□□ -0.91
CAPN3-206ENST00000397163 PLK2Q9NYY3 685 aa9.38□□□□□ -0.91
CAPN3-206ENST00000397163 BCAP29Q9UHQ4 241 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms