RNA–Protein interactions for RNA: ENST00000397016.6

CPNE6-201, Transcript of copine 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE6, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-201ENST00000397016 PID1Q7Z2X4 250 aa16.97■□□□□ 0.31
CPNE6-201ENST00000397016 CTAGE3PQ8IX95 158 aa16.97■□□□□ 0.31
CPNE6-201ENST00000397016 KIRREL3Q8IZU9 778 aa16.97■□□□□ 0.31
CPNE6-201ENST00000397016 FITM2Q8N6M3 262 aa16.97■□□□□ 0.31
CPNE6-201ENST00000397016 ZNF570Q96NI8 536 aa16.97■□□□□ 0.31
CPNE6-201ENST00000397016 FRMD8Q9BZ67 464 aaPredicted RBP16.97■□□□□ 0.31
CPNE6-201ENST00000397016 PRDM16Q9HAZ2 1276 aa16.97■□□□□ 0.31
CPNE6-201ENST00000397016 MARCH5Q9NX47 278 aa16.97■□□□□ 0.31
CPNE6-201ENST00000397016 KLHL8Q9P2G9 620 aaPredicted RBP16.97■□□□□ 0.31
CPNE6-201ENST00000397016 SLC27A5Q9Y2P5 690 aa16.97■□□□□ 0.31
CPNE6-201ENST00000397016 SCN5AQ14524 2016 aa16.97■□□□□ 0.31
CPNE6-201ENST00000397016 CXorf49A8MYA2 514 aaPredicted RBP16.97■□□□□ 0.31
CPNE6-201ENST00000397016 OPHN1O60890 802 aa16.97■□□□□ 0.31
CPNE6-201ENST00000397016 TSHRP16473 764 aa16.97■□□□□ 0.31
CPNE6-201ENST00000397016 RPA3P35244 121 aaPredicted RBP16.97■□□□□ 0.31
CPNE6-201ENST00000397016 PRMT2P55345 433 aa16.97■□□□□ 0.31
CPNE6-201ENST00000397016 WDR4P57081 412 aaKnown RBP16.97■□□□□ 0.31
CPNE6-201ENST00000397016 IRX1P78414 480 aaPredicted RBP16.97■□□□□ 0.31
CPNE6-201ENST00000397016 UNC5AQ6ZN44 842 aa16.97■□□□□ 0.31
CPNE6-201ENST00000397016 DEFB128Q7Z7B8 93 aa16.97■□□□□ 0.31
CPNE6-201ENST00000397016 PPM1NQ8N819 430 aa16.97■□□□□ 0.31
CPNE6-201ENST00000397016 SIGLEC10Q96LC7 697 aa16.97■□□□□ 0.31
CPNE6-201ENST00000397016 MAGEB18Q96M61 343 aa16.97■□□□□ 0.31
CPNE6-201ENST00000397016 AGAP3Q96P47 875 aa16.97■□□□□ 0.31
CPNE6-201ENST00000397016 RAB3IPQ96QF0 476 aaPredicted RBP16.97■□□□□ 0.31
CPNE6-201ENST00000397016 TGS1Q96RS0 853 aaKnown RBP16.97■□□□□ 0.31
CPNE6-201ENST00000397016 FERMT1Q9BQL6 677 aa16.97■□□□□ 0.31
CPNE6-201ENST00000397016 PPCSQ9HAB8 311 aa16.97■□□□□ 0.31
CPNE6-201ENST00000397016 MYO16Q9Y6X6 1858 aa16.96■□□□□ 0.31
CPNE6-201ENST00000397016 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.96■□□□□ 0.31
CPNE6-201ENST00000397016 TBKBP1A7MCY6 615 aa16.96■□□□□ 0.31
CPNE6-201ENST00000397016 SYN3O14994 580 aa16.96■□□□□ 0.31
CPNE6-201ENST00000397016 PAGE1O75459 146 aa16.96■□□□□ 0.31
CPNE6-201ENST00000397016 LUC7L3O95232 432 aaKnown RBP16.96■□□□□ 0.31
CPNE6-201ENST00000397016 FDFT1P37268 417 aa16.96■□□□□ 0.31
CPNE6-201ENST00000397016 HCAR3P49019 387 aa16.96■□□□□ 0.31
CPNE6-201ENST00000397016 CASC4Q6P4E1 433 aa16.96■□□□□ 0.31
CPNE6-201ENST00000397016 RSPO2Q6UXX9 243 aaPredicted RBP16.96■□□□□ 0.31
CPNE6-201ENST00000397016 PDZD4Q76G19 769 aaPredicted RBP16.96■□□□□ 0.31
CPNE6-201ENST00000397016 KIF2BQ8N4N8 673 aa16.96■□□□□ 0.31
CPNE6-201ENST00000397016 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.96■□□□□ 0.31
CPNE6-201ENST00000397016 RNF208Q9H0X6 261 aa16.96■□□□□ 0.31
CPNE6-201ENST00000397016 SMOC2Q9H3U7 446 aa16.96■□□□□ 0.31
CPNE6-201ENST00000397016 ELAC1Q9H777 363 aaKnown RBP16.96■□□□□ 0.31
CPNE6-201ENST00000397016 FETUBQ9UGM5 382 aa16.96■□□□□ 0.31
CPNE6-201ENST00000397016 PCDHB5Q9Y5E4 795 aa16.96■□□□□ 0.31
CPNE6-201ENST00000397016 IKBKGQ9Y6K9 419 aa16.96■□□□□ 0.31
CPNE6-201ENST00000397016 ALDH2P05091 517 aa16.96■□□□□ 0.3
CPNE6-201ENST00000397016 INHBAP08476 426 aa16.96■□□□□ 0.3
CPNE6-201ENST00000397016 CPB1P15086 417 aa16.96■□□□□ 0.3
CPNE6-201ENST00000397016 CA4P22748 312 aa16.96■□□□□ 0.3
CPNE6-201ENST00000397016 PTPN3P26045 913 aa16.96■□□□□ 0.3
CPNE6-201ENST00000397016 CALRP27797 417 aaKnown RBP16.96■□□□□ 0.3
CPNE6-201ENST00000397016 SESN2P58004 480 aaPredicted RBP16.96■□□□□ 0.3
CPNE6-201ENST00000397016 SATB1Q01826 763 aa16.96■□□□□ 0.3
CPNE6-201ENST00000397016 EIF4EBP2Q13542 120 aaPredicted RBP16.96■□□□□ 0.3
CPNE6-201ENST00000397016 RASA2Q15283 850 aa16.96■□□□□ 0.3
CPNE6-201ENST00000397016 SMAD1Q15797 465 aaKnown RBP16.96■□□□□ 0.3
CPNE6-201ENST00000397016 NFE2Q16621 373 aaPredicted RBP16.96■□□□□ 0.3
CPNE6-201ENST00000397016 TRMT10BQ6PF06 316 aaKnown RBP16.96■□□□□ 0.3
CPNE6-201ENST00000397016 NUP93Q8N1F7 819 aa16.96■□□□□ 0.3
CPNE6-201ENST00000397016 MZB1Q8WU39 189 aa16.96■□□□□ 0.3
CPNE6-201ENST00000397016 TRIM62Q9BVG3 475 aa16.96■□□□□ 0.3
CPNE6-201ENST00000397016 C12orf65Q9H3J6 166 aaKnown RBP16.96■□□□□ 0.3
CPNE6-201ENST00000397016 PAK6Q9NQU5 681 aaPredicted RBP16.96■□□□□ 0.3
CPNE6-201ENST00000397016 SMYD2Q9NRG4 433 aa16.96■□□□□ 0.3
CPNE6-201ENST00000397016 ARHGEF38Q9NXL2 777 aa16.96■□□□□ 0.3
CPNE6-201ENST00000397016 GMIPQ9P107 970 aa16.96■□□□□ 0.3
CPNE6-201ENST00000397016 STK38LQ9Y2H1 464 aa16.96■□□□□ 0.3
CPNE6-201ENST00000397016 COL4A4P53420 1690 aaPredicted RBP16.95■□□□□ 0.3
CPNE6-201ENST00000397016 WDR27A2RRH5 827 aa16.95■□□□□ 0.3
CPNE6-201ENST00000397016 PITPNM1O00562 1244 aa16.95■□□□□ 0.3
CPNE6-201ENST00000397016 UGT1A9O60656 530 aa16.95■□□□□ 0.3
CPNE6-201ENST00000397016 UNC5CO95185 931 aa16.95■□□□□ 0.3
CPNE6-201ENST00000397016 C1QAP02745 245 aa16.95■□□□□ 0.3
CPNE6-201ENST00000397016 COL6A1P12109 1028 aa16.95■□□□□ 0.3
CPNE6-201ENST00000397016 FAAP100Q0VG06 881 aa16.95■□□□□ 0.3
CPNE6-201ENST00000397016 ZBTB17Q13105 803 aa16.95■□□□□ 0.3
CPNE6-201ENST00000397016 RTP2Q5QGT7 225 aa16.95■□□□□ 0.3
CPNE6-201ENST00000397016 ZNF280DQ6N043 979 aa16.95■□□□□ 0.3
CPNE6-201ENST00000397016 FUT10Q6P4F1 479 aa16.95■□□□□ 0.3
CPNE6-201ENST00000397016 TAS1R1Q7RTX1 841 aa16.95■□□□□ 0.3
CPNE6-201ENST00000397016 SLC44A1Q8WWI5 657 aa16.95■□□□□ 0.3
CPNE6-201ENST00000397016 EBNA1BP2Q99848 306 aaKnown RBP16.95■□□□□ 0.3
CPNE6-201ENST00000397016 CRISPLD1Q9H336 500 aa16.95■□□□□ 0.3
CPNE6-201ENST00000397016 UGT1A7Q9HAW7 530 aa16.95■□□□□ 0.3
CPNE6-201ENST00000397016 UGT1A10Q9HAW8 530 aa16.95■□□□□ 0.3
CPNE6-201ENST00000397016 UGT1A8Q9HAW9 530 aa16.95■□□□□ 0.3
CPNE6-201ENST00000397016 XAB2Q9HCS7 855 aaKnown RBP16.95■□□□□ 0.3
CPNE6-201ENST00000397016 TXLNGQ9NUQ3 528 aa16.95■□□□□ 0.3
CPNE6-201ENST00000397016 NEU3Q9UQ49 428 aa16.95■□□□□ 0.3
CPNE6-201ENST00000397016 SHROOM3Q8TF72 1996 aa16.95■□□□□ 0.3
CPNE6-201ENST00000397016 USP12O75317 370 aa16.94■□□□□ 0.3
CPNE6-201ENST00000397016 SPAG6O75602 509 aa16.94■□□□□ 0.3
CPNE6-201ENST00000397016 UPP2O95045 317 aa16.94■□□□□ 0.3
CPNE6-201ENST00000397016 CCR1P32246 355 aa16.94■□□□□ 0.3
CPNE6-201ENST00000397016 GARSP41250 739 aaKnown RBP16.94■□□□□ 0.3
CPNE6-201ENST00000397016 PPIDQ08752 370 aaKnown RBP16.94■□□□□ 0.3
CPNE6-201ENST00000397016 PARP6Q2NL67 630 aa16.94■□□□□ 0.3
CPNE6-201ENST00000397016 ARHGAP36Q6ZRI8 547 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms