RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 CYP3A43Q9HB55 503 aa14.27□□□□□ -0.12
NUP98-204ENST00000397004 PDGFCQ9NRA1 345 aa14.27□□□□□ -0.12
NUP98-204ENST00000397004 PCDHB12Q9Y5F1 795 aa14.27□□□□□ -0.12
NUP98-204ENST00000397004 A0A0A0MRY4 1105 aa14.27□□□□□ -0.13
NUP98-204ENST00000397004 IL18RAPO95256 599 aa14.27□□□□□ -0.13
NUP98-204ENST00000397004 CEACAM7Q14002 265 aa14.27□□□□□ -0.13
NUP98-204ENST00000397004 ZNF618Q5T7W0 954 aa14.27□□□□□ -0.13
NUP98-204ENST00000397004 FAM160B1Q5W0V3 765 aa14.27□□□□□ -0.13
NUP98-204ENST00000397004 FSTL4Q6MZW2 842 aa14.27□□□□□ -0.13
NUP98-204ENST00000397004 LBX2Q6XYB7 198 aa14.27□□□□□ -0.13
NUP98-204ENST00000397004 CDKL3Q8IVW4 592 aaPredicted RBP14.27□□□□□ -0.13
NUP98-204ENST00000397004 KLRG1Q96E93 195 aa14.27□□□□□ -0.13
NUP98-204ENST00000397004 SPATA13Q96N96 652 aa14.27□□□□□ -0.13
NUP98-204ENST00000397004 TBCBQ99426 244 aa14.27□□□□□ -0.13
NUP98-204ENST00000397004 MCMBPQ9BTE3 642 aa14.27□□□□□ -0.13
NUP98-204ENST00000397004 RIMS3Q9UJD0 308 aa14.27□□□□□ -0.13
NUP98-204ENST00000397004 SNX9Q9Y5X1 595 aa14.27□□□□□ -0.13
NUP98-204ENST00000397004 CPA3P15088 417 aa14.27□□□□□ -0.13
NUP98-204ENST00000397004 MPSTP25325 297 aa14.27□□□□□ -0.13
NUP98-204ENST00000397004 EML3Q32P44 896 aa14.27□□□□□ -0.13
NUP98-204ENST00000397004 CLEC14AQ86T13 490 aa14.27□□□□□ -0.13
NUP98-204ENST00000397004 NT5C1AQ9BXI3 368 aa14.27□□□□□ -0.13
NUP98-204ENST00000397004 CDH19Q9H159 772 aa14.27□□□□□ -0.13
NUP98-204ENST00000397004 STN1Q9H668 368 aaKnown RBP14.27□□□□□ -0.13
NUP98-204ENST00000397004 DCDC2Q9UHG0 476 aa14.27□□□□□ -0.13
NUP98-204ENST00000397004 G3BP2Q9UN86 482 aaKnown RBP14.27□□□□□ -0.13
NUP98-204ENST00000397004 C22orf31O95567 290 aa14.26□□□□□ -0.13
NUP98-204ENST00000397004 EPHA3P29320 983 aa14.26□□□□□ -0.13
NUP98-204ENST00000397004 GMPSP49915 693 aaPredicted RBP14.26□□□□□ -0.13
NUP98-204ENST00000397004 IGBP1P78318 339 aa14.26□□□□□ -0.13
NUP98-204ENST00000397004 DEUP1Q05D60 604 aa14.26□□□□□ -0.13
NUP98-204ENST00000397004 TNFAIP1Q13829 316 aa14.26□□□□□ -0.13
NUP98-204ENST00000397004 TMEM132AQ24JP5 1023 aa14.26□□□□□ -0.13
NUP98-204ENST00000397004 GRAMD1BQ3KR37 738 aa14.26□□□□□ -0.13
NUP98-204ENST00000397004 HEATR6Q6AI08 1181 aaKnown RBP14.26□□□□□ -0.13
NUP98-204ENST00000397004 FAM131BQ86XD5 332 aa14.26□□□□□ -0.13
NUP98-204ENST00000397004 ST13P4Q8IZP2 240 aaPredicted RBP14.26□□□□□ -0.13
NUP98-204ENST00000397004 ZNF567Q8N184 647 aa14.26□□□□□ -0.13
NUP98-204ENST00000397004 RNF169Q8NCN4 708 aa14.26□□□□□ -0.13
NUP98-204ENST00000397004 KBTBD7Q8WVZ9 684 aa14.26□□□□□ -0.13
NUP98-204ENST00000397004 MARK4Q96L34 752 aa14.26□□□□□ -0.13
NUP98-204ENST00000397004 KLHL32Q96NJ5 620 aa14.26□□□□□ -0.13
NUP98-204ENST00000397004 SIKE1Q9BRV8 207 aa14.26□□□□□ -0.13
NUP98-204ENST00000397004 PICK1Q9NRD5 415 aa14.26□□□□□ -0.13
NUP98-204ENST00000397004 SSX2IPQ9Y2D8 614 aa14.26□□□□□ -0.13
NUP98-204ENST00000397004 SLC4A7Q9Y6M7 1214 aa14.26□□□□□ -0.13
NUP98-204ENST00000397004 COMMD3-BMI1R4GMX3 469 aa14.26□□□□□ -0.13
NUP98-204ENST00000397004 SBF1O95248 1867 aa14.26□□□□□ -0.13
NUP98-204ENST00000397004 ZCWPW2A0A1B0GU75 182 aa14.26□□□□□ -0.13
NUP98-204ENST00000397004 RNF103O00237 685 aa14.26□□□□□ -0.13
NUP98-204ENST00000397004 TXNDC9O14530 226 aa14.26□□□□□ -0.13
NUP98-204ENST00000397004 AIM2O14862 343 aa14.26□□□□□ -0.13
NUP98-204ENST00000397004 CRTAMO95727 393 aa14.26□□□□□ -0.13
NUP98-204ENST00000397004 VTNP04004 478 aa14.26□□□□□ -0.13
NUP98-204ENST00000397004 CCDC130P13994 396 aa14.26□□□□□ -0.13
NUP98-204ENST00000397004 TYK2P29597 1187 aa14.26□□□□□ -0.13
NUP98-204ENST00000397004 PKNOX1P55347 436 aa14.26□□□□□ -0.13
NUP98-204ENST00000397004 MRPS22P82650 360 aaKnown RBP14.26□□□□□ -0.13
NUP98-204ENST00000397004 R3HDM1Q15032 1099 aaKnown RBP14.26□□□□□ -0.13
NUP98-204ENST00000397004 ZNF423Q2M1K9 1284 aa14.26□□□□□ -0.13
NUP98-204ENST00000397004 PQLC1Q8N2U9 271 aa14.26□□□□□ -0.13
NUP98-204ENST00000397004 FAM156AQ8NDB6 213 aa14.26□□□□□ -0.13
NUP98-204ENST00000397004 ZFP28Q8NHY6 868 aa14.26□□□□□ -0.13
NUP98-204ENST00000397004 GRIN3AQ8TCU5 1115 aa14.26□□□□□ -0.13
NUP98-204ENST00000397004 ATP2A3Q93084 1043 aa14.26□□□□□ -0.13
NUP98-204ENST00000397004 CENPKQ9BS16 269 aa14.26□□□□□ -0.13
NUP98-204ENST00000397004 CCDC28BQ9BUN5 200 aa14.26□□□□□ -0.13
NUP98-204ENST00000397004 SENP6Q9GZR1 1112 aaPredicted RBP14.26□□□□□ -0.13
NUP98-204ENST00000397004 DPP3Q9NY33 737 aa14.26□□□□□ -0.13
NUP98-204ENST00000397004 MORF4L1Q9UBU8 362 aa14.26□□□□□ -0.13
NUP98-204ENST00000397004 MAGED2Q9UNF1 606 aaPredicted RBP14.26□□□□□ -0.13
NUP98-204ENST00000397004 GOLGA8TH3BQL2 631 aa14.26□□□□□ -0.13
NUP98-204ENST00000397004 LMO2P25791 158 aa14.26□□□□□ -0.13
NUP98-204ENST00000397004 PMLP29590 882 aa14.26□□□□□ -0.13
NUP98-204ENST00000397004 MYLK3Q32MK0 819 aa14.26□□□□□ -0.13
NUP98-204ENST00000397004 NADK2Q4G0N4 442 aa14.26□□□□□ -0.13
NUP98-204ENST00000397004 CELF3Q5SZQ8 465 aaKnown RBP14.26□□□□□ -0.13
NUP98-204ENST00000397004 OR52K1Q8NGK4 314 aa14.26□□□□□ -0.13
NUP98-204ENST00000397004 ISL2Q96A47 359 aa14.26□□□□□ -0.13
NUP98-204ENST00000397004 GATA5Q9BWX5 397 aaPredicted RBP14.26□□□□□ -0.13
NUP98-204ENST00000397004 GGA3Q9NZ52 723 aa14.26□□□□□ -0.13
NUP98-204ENST00000397004 CNTFP26441 200 aa14.25□□□□□ -0.13
NUP98-204ENST00000397004 CSRP3P50461 194 aa14.25□□□□□ -0.13
NUP98-204ENST00000397004 RBM44Q6ZP01 1051 aaKnown RBP14.25□□□□□ -0.13
NUP98-204ENST00000397004 FBXO16Q8IX29 292 aaPredicted RBP14.25□□□□□ -0.13
NUP98-204ENST00000397004 MARVELD2Q8N4S9 558 aa14.25□□□□□ -0.13
NUP98-204ENST00000397004 SLC7A14Q8TBB6 771 aa14.25□□□□□ -0.13
NUP98-204ENST00000397004 CMTM5Q96DZ9 223 aa14.25□□□□□ -0.13
NUP98-204ENST00000397004 MFSD3Q96ES6 412 aa14.25□□□□□ -0.13
NUP98-204ENST00000397004 C2orf40Q9H1Z8 148 aa14.25□□□□□ -0.13
NUP98-204ENST00000397004 ZNF385DQ9H6B1 395 aa14.25□□□□□ -0.13
NUP98-204ENST00000397004 PRDM16Q9HAZ2 1276 aa14.25□□□□□ -0.13
NUP98-204ENST00000397004 HOXC10Q9NYD6 342 aa14.25□□□□□ -0.13
NUP98-204ENST00000397004 KCNK1O00180 336 aa14.25□□□□□ -0.13
NUP98-204ENST00000397004 GRID2O43424 1007 aa14.25□□□□□ -0.13
NUP98-204ENST00000397004 DENRO43583 198 aaKnown RBP14.25□□□□□ -0.13
NUP98-204ENST00000397004 PEX1O43933 1283 aa14.25□□□□□ -0.13
NUP98-204ENST00000397004 ATICP31939 592 aa14.25□□□□□ -0.13
NUP98-204ENST00000397004 TMEM132DQ14C87 1099 aa14.25□□□□□ -0.13
NUP98-204ENST00000397004 DBN1Q16643 649 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms