RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 IPO7O95373 1038 aaKnown RBP10.73□□□□□ -0.69
NEDD8-202ENST00000396828 IGLV3-19P01714 112 aa10.73□□□□□ -0.69
NEDD8-202ENST00000396828 KRT5P13647 590 aa10.73□□□□□ -0.69
NEDD8-202ENST00000396828 CD19P15391 556 aa10.73□□□□□ -0.69
NEDD8-202ENST00000396828 FECHP22830 423 aa10.73□□□□□ -0.69
NEDD8-202ENST00000396828 SLC6A4P31645 630 aa10.73□□□□□ -0.69
NEDD8-202ENST00000396828 CD70P32970 193 aa10.73□□□□□ -0.69
NEDD8-202ENST00000396828 BCAT1P54687 386 aa10.73□□□□□ -0.69
NEDD8-202ENST00000396828 DAOAP59103 153 aa10.73□□□□□ -0.69
NEDD8-202ENST00000396828 BPIFB4P59827 614 aa10.73□□□□□ -0.69
NEDD8-202ENST00000396828 CCZ1BP86790 482 aa10.73□□□□□ -0.69
NEDD8-202ENST00000396828 CCZ1P86791 482 aaPredicted RBP10.73□□□□□ -0.69
NEDD8-202ENST00000396828 KLHL30Q0D2K2 578 aa10.73□□□□□ -0.69
NEDD8-202ENST00000396828 MPPE1Q53F39 396 aa10.73□□□□□ -0.69
NEDD8-202ENST00000396828 SGO2Q562F6 1265 aa10.73□□□□□ -0.69
NEDD8-202ENST00000396828 TDRD12Q587J7 1177 aaKnown RBP10.73□□□□□ -0.69
NEDD8-202ENST00000396828 WDR45BQ5MNZ6 344 aa10.73□□□□□ -0.69
NEDD8-202ENST00000396828 SYCP2LQ5T4T6 812 aa10.73□□□□□ -0.69
NEDD8-202ENST00000396828 PMF1Q6P1K2 205 aa10.73□□□□□ -0.69
NEDD8-202ENST00000396828 RFWD3Q6PCD5 774 aa10.73□□□□□ -0.69
NEDD8-202ENST00000396828 SERPINA13PQ6UXR4 307 aa10.73□□□□□ -0.69
NEDD8-202ENST00000396828 RABEPKQ7Z6M1 372 aa10.73□□□□□ -0.69
NEDD8-202ENST00000396828 KIAA0907Q7Z7F0 614 aaPredicted RBP10.73□□□□□ -0.69
NEDD8-202ENST00000396828 VPS36Q86VN1 386 aa10.73□□□□□ -0.69
NEDD8-202ENST00000396828 MARCH9Q86YJ5 346 aa10.73□□□□□ -0.69
NEDD8-202ENST00000396828 NAXDQ8IW45 347 aa10.73□□□□□ -0.69
NEDD8-202ENST00000396828 CCDC170Q8IYT3 715 aa10.73□□□□□ -0.69
NEDD8-202ENST00000396828 CADM4Q8NFZ8 388 aa10.73□□□□□ -0.69
NEDD8-202ENST00000396828 CCDC42Q96M95 316 aa10.73□□□□□ -0.69
NEDD8-202ENST00000396828 SLC2A11Q9BYW1 496 aa10.73□□□□□ -0.69
NEDD8-202ENST00000396828 KCNF1Q9H3M0 494 aa10.73□□□□□ -0.69
NEDD8-202ENST00000396828 DEF6Q9H4E7 631 aa10.73□□□□□ -0.69
NEDD8-202ENST00000396828 LRRC4Q9HBW1 653 aa10.73□□□□□ -0.69
NEDD8-202ENST00000396828 ABCB8Q9NUT2 735 aa10.73□□□□□ -0.69
NEDD8-202ENST00000396828 STOML2Q9UJZ1 356 aa10.73□□□□□ -0.69
NEDD8-202ENST00000396828 STRIP2Q9ULQ0 834 aa10.73□□□□□ -0.69
NEDD8-202ENST00000396828 FNDC3AQ9Y2H6 1198 aaKnown RBP10.73□□□□□ -0.69
NEDD8-202ENST00000396828 PCDHB4Q9Y5E5 795 aa10.73□□□□□ -0.69
NEDD8-202ENST00000396828 BAHCC1Q9P281 2608 aa10.73□□□□□ -0.69
NEDD8-202ENST00000396828 PTPRBP23467 1997 aa10.72□□□□□ -0.69
NEDD8-202ENST00000396828 A0A1B0GVT2 93 aa10.72□□□□□ -0.69
NEDD8-202ENST00000396828 SSU72P8A0A1W2PR75 194 aa10.72□□□□□ -0.69
NEDD8-202ENST00000396828 KCNK3O14649 394 aa10.72□□□□□ -0.69
NEDD8-202ENST00000396828 CYBBP04839 570 aa10.72□□□□□ -0.69
NEDD8-202ENST00000396828 FTH1P19P0C7X4 201 aa10.72□□□□□ -0.69
NEDD8-202ENST00000396828 GNSP15586 552 aa10.72□□□□□ -0.69
NEDD8-202ENST00000396828 CYLC1P35663 651 aaPredicted RBP10.72□□□□□ -0.69
NEDD8-202ENST00000396828 PRKCIP41743 596 aa10.72□□□□□ -0.69
NEDD8-202ENST00000396828 CSNK1EP49674 416 aaKnown RBP10.72□□□□□ -0.69
NEDD8-202ENST00000396828 ZNF132P52740 706 aa10.72□□□□□ -0.69
NEDD8-202ENST00000396828 PTK2Q05397 1052 aa10.72□□□□□ -0.69
NEDD8-202ENST00000396828 BST2Q10589 180 aaKnown RBP10.72□□□□□ -0.69
NEDD8-202ENST00000396828 SLC14A1Q13336 389 aa10.72□□□□□ -0.69
NEDD8-202ENST00000396828 CAMK2GQ13555 558 aaPredicted RBP10.72□□□□□ -0.69
NEDD8-202ENST00000396828 EIF4HQ15056 248 aaKnown RBP10.72□□□□□ -0.69
NEDD8-202ENST00000396828 HLA-BQ31612 363 aa10.72□□□□□ -0.69
NEDD8-202ENST00000396828 FAM133BQ5BKY9 247 aaKnown RBP10.72□□□□□ -0.69
NEDD8-202ENST00000396828 KCNT1Q5JUK3 1230 aa10.72□□□□□ -0.69
NEDD8-202ENST00000396828 ADGRF1Q5T601 910 aa10.72□□□□□ -0.69
NEDD8-202ENST00000396828 NADSYN1Q6IA69 706 aa10.72□□□□□ -0.69
NEDD8-202ENST00000396828 WDR59Q6PJI9 974 aa10.72□□□□□ -0.69
NEDD8-202ENST00000396828 LAYNQ6UX15 382 aa10.72□□□□□ -0.69
NEDD8-202ENST00000396828 CHST9Q7L1S5 443 aa10.72□□□□□ -0.69
NEDD8-202ENST00000396828 IRF2BP2Q7Z5L9 587 aa10.72□□□□□ -0.69
NEDD8-202ENST00000396828 TMEM139Q8IV31 216 aa10.72□□□□□ -0.69
NEDD8-202ENST00000396828 FAM71AQ8IYT1 594 aa10.72□□□□□ -0.69
NEDD8-202ENST00000396828 SLC35F5Q8WV83 523 aa10.72□□□□□ -0.69
NEDD8-202ENST00000396828 UCMAQ8WVF2 138 aa10.72□□□□□ -0.69
NEDD8-202ENST00000396828 KCTD13Q8WZ19 329 aa10.72□□□□□ -0.69
NEDD8-202ENST00000396828 TMA16Q96EY4 203 aaKnown RBP10.72□□□□□ -0.69
NEDD8-202ENST00000396828 HAUS4Q9H6D7 363 aa10.72□□□□□ -0.69
NEDD8-202ENST00000396828 GAREM1Q9H706 876 aa10.72□□□□□ -0.69
NEDD8-202ENST00000396828 NHEJ1Q9H9Q4 299 aaPredicted RBP10.72□□□□□ -0.69
NEDD8-202ENST00000396828 PRSS16Q9NQE7 514 aa10.72□□□□□ -0.69
NEDD8-202ENST00000396828 TOR4AQ9NXH8 423 aa10.72□□□□□ -0.69
NEDD8-202ENST00000396828 SUSD2Q9UGT4 822 aa10.72□□□□□ -0.69
NEDD8-202ENST00000396828 PCOLCE2Q9UKZ9 415 aa10.72□□□□□ -0.69
NEDD8-202ENST00000396828 HBS1LQ9Y450 684 aaKnown RBP10.72□□□□□ -0.69
NEDD8-202ENST00000396828 TMEM8BA6NDV4 472 aa10.71□□□□□ -0.69
NEDD8-202ENST00000396828 SOWAHDA6NJG2 315 aa10.71□□□□□ -0.69
NEDD8-202ENST00000396828 NPC1O15118 1278 aa10.71□□□□□ -0.69
NEDD8-202ENST00000396828 BCAT2O15382 392 aaPredicted RBP10.71□□□□□ -0.69
NEDD8-202ENST00000396828 AKR1B10O60218 316 aa10.71□□□□□ -0.69
NEDD8-202ENST00000396828 IGLV3-27P01718 113 aa10.71□□□□□ -0.69
NEDD8-202ENST00000396828 FYNP06241 537 aa10.71□□□□□ -0.69
NEDD8-202ENST00000396828 PNMA6AP0CW24 399 aaPredicted RBP10.71□□□□□ -0.69
NEDD8-202ENST00000396828 ACADMP11310 421 aa10.71□□□□□ -0.69
NEDD8-202ENST00000396828 VDRP11473 427 aa10.71□□□□□ -0.69
NEDD8-202ENST00000396828 BRD2P25440 801 aaKnown RBP10.71□□□□□ -0.69
NEDD8-202ENST00000396828 OXTRP30559 389 aa10.71□□□□□ -0.69
NEDD8-202ENST00000396828 HARS2P49590 506 aaKnown RBP10.71□□□□□ -0.69
NEDD8-202ENST00000396828 SLC8A3P57103 927 aa10.71□□□□□ -0.69
NEDD8-202ENST00000396828 RPS14P62263 151 aaKnown RBP10.71□□□□□ -0.69
NEDD8-202ENST00000396828 RING1Q06587 406 aa10.71□□□□□ -0.69
NEDD8-202ENST00000396828 SPA17Q15506 151 aa10.71□□□□□ -0.69
NEDD8-202ENST00000396828 KIF19Q2TAC6 998 aa10.71□□□□□ -0.69
NEDD8-202ENST00000396828 FNDC3BQ53EP0 1204 aaKnown RBP10.71□□□□□ -0.69
NEDD8-202ENST00000396828 PIK3R6Q5UE93 754 aa10.71□□□□□ -0.69
NEDD8-202ENST00000396828 HGSNATQ68CP4 663 aa10.71□□□□□ -0.69
NEDD8-202ENST00000396828 MBLAC2Q68D91 279 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms