RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 TMEM216Q9P0N5 145 aa14.23□□□□□ -0.13
COL4A3-202ENST00000396578 ZNF112Q9UJU3 913 aa14.23□□□□□ -0.13
COL4A3-202ENST00000396578 LYVE1Q9Y5Y7 322 aa14.23□□□□□ -0.13
COL4A3-202ENST00000396578 ROBO2Q9HCK4 1378 aa14.23□□□□□ -0.13
COL4A3-202ENST00000396578 ELK3P41970 407 aa14.23□□□□□ -0.13
COL4A3-202ENST00000396578 CHPFQ8IZ52 775 aa14.23□□□□□ -0.13
COL4A3-202ENST00000396578 METTL6Q8TCB7 284 aa14.23□□□□□ -0.13
COL4A3-202ENST00000396578 TMEM176AQ96HP8 235 aa14.23□□□□□ -0.13
COL4A3-202ENST00000396578 PRKD2Q9BZL6 878 aa14.23□□□□□ -0.13
COL4A3-202ENST00000396578 ZMYM5Q9UJ78 669 aa14.23□□□□□ -0.13
COL4A3-202ENST00000396578 CEP152O94986 1710 aa14.23□□□□□ -0.13
COL4A3-202ENST00000396578 MGRN1O60291 552 aa14.23□□□□□ -0.13
COL4A3-202ENST00000396578 RAP1GAPP47736 663 aa14.23□□□□□ -0.13
COL4A3-202ENST00000396578 NT5DC3Q86UY8 548 aa14.23□□□□□ -0.13
COL4A3-202ENST00000396578 SNX32Q86XE0 403 aa14.23□□□□□ -0.13
COL4A3-202ENST00000396578 TMEM159Q96B96 161 aa14.23□□□□□ -0.13
COL4A3-202ENST00000396578 CDH9Q9ULB4 789 aa14.23□□□□□ -0.13
COL4A3-202ENST00000396578 ZNF232Q9UNY5 417 aa14.23□□□□□ -0.13
COL4A3-202ENST00000396578 PRG2P13727 222 aa14.23□□□□□ -0.13
COL4A3-202ENST00000396578 ZNF844Q08AG5 666 aa14.23□□□□□ -0.13
COL4A3-202ENST00000396578 FAM117BQ6P1L5 589 aa14.23□□□□□ -0.13
COL4A3-202ENST00000396578 KBTBD2Q8IY47 623 aa14.23□□□□□ -0.13
COL4A3-202ENST00000396578 AADATQ8N5Z0 425 aa14.23□□□□□ -0.13
COL4A3-202ENST00000396578 EEF1AKMT1Q8WVE0 214 aa14.23□□□□□ -0.13
COL4A3-202ENST00000396578 UNKQ9C0B0 810 aaKnown RBP14.23□□□□□ -0.13
COL4A3-202ENST00000396578 ABCB10Q9NRK6 738 aa14.23□□□□□ -0.13
COL4A3-202ENST00000396578 LRRC4BQ9NT99 713 aa14.23□□□□□ -0.13
COL4A3-202ENST00000396578 C2CD2Q9Y426 696 aa14.23□□□□□ -0.13
COL4A3-202ENST00000396578 DISP1Q96F81 1524 aa14.23□□□□□ -0.13
COL4A3-202ENST00000396578 MYL4P12829 197 aa14.22□□□□□ -0.13
COL4A3-202ENST00000396578 MPZL3Q6UWV2 235 aa14.22□□□□□ -0.13
COL4A3-202ENST00000396578 ATG9AQ7Z3C6 839 aa14.22□□□□□ -0.13
COL4A3-202ENST00000396578 OR52L1Q8NGH7 329 aa14.22□□□□□ -0.13
COL4A3-202ENST00000396578 PCDHA3Q9Y5H8 950 aa14.22□□□□□ -0.13
COL4A3-202ENST00000396578 FSBPO95073 299 aa14.22□□□□□ -0.13
COL4A3-202ENST00000396578 S100A6P06703 90 aa14.22□□□□□ -0.13
COL4A3-202ENST00000396578 DNAJC14Q6Y2X3 702 aaPredicted RBP14.22□□□□□ -0.13
COL4A3-202ENST00000396578 DAGLBQ8NCG7 672 aa14.22□□□□□ -0.13
COL4A3-202ENST00000396578 RXFP2Q8WXD0 754 aa14.22□□□□□ -0.13
COL4A3-202ENST00000396578 FAM210AQ96ND0 272 aa14.22□□□□□ -0.13
COL4A3-202ENST00000396578 MAPRE3Q9UPY8 281 aa14.22□□□□□ -0.13
COL4A3-202ENST00000396578 TRDMT1O14717 391 aaKnown RBP14.22□□□□□ -0.13
COL4A3-202ENST00000396578 GPR182O15218 404 aa14.22□□□□□ -0.13
COL4A3-202ENST00000396578 SERPINF2P08697 491 aa14.22□□□□□ -0.13
COL4A3-202ENST00000396578 C1QBPQ07021 282 aaKnown RBP14.22□□□□□ -0.13
COL4A3-202ENST00000396578 ILDR2Q71H61 639 aa14.22□□□□□ -0.13
COL4A3-202ENST00000396578 FAM20CQ8IXL6 584 aa14.22□□□□□ -0.13
COL4A3-202ENST00000396578 RNF148Q8N7C7 305 aa14.22□□□□□ -0.13
COL4A3-202ENST00000396578 HGH1Q9BTY7 390 aa14.22□□□□□ -0.13
COL4A3-202ENST00000396578 PTPRHQ9HD43 1115 aa14.22□□□□□ -0.13
COL4A3-202ENST00000396578 RPS6KA6Q9UK32 745 aa14.22□□□□□ -0.13
COL4A3-202ENST00000396578 SNAP91O60641 907 aa14.22□□□□□ -0.13
COL4A3-202ENST00000396578 PRKAR1AP10644 381 aa14.22□□□□□ -0.13
COL4A3-202ENST00000396578 PIK3CGP48736 1102 aa14.22□□□□□ -0.13
COL4A3-202ENST00000396578 EFEMP1Q12805 493 aa14.22□□□□□ -0.13
COL4A3-202ENST00000396578 TRMT11Q7Z4G4 463 aaKnown RBP14.22□□□□□ -0.13
COL4A3-202ENST00000396578 MRPS31Q92665 395 aaKnown RBP14.22□□□□□ -0.13
COL4A3-202ENST00000396578 CISHQ9NSE2 258 aa14.22□□□□□ -0.13
COL4A3-202ENST00000396578 FBXO28Q9NVF7 368 aa14.22□□□□□ -0.13
COL4A3-202ENST00000396578 ENTPD4Q9Y227 616 aa14.22□□□□□ -0.13
COL4A3-202ENST00000396578 A0A096LPK6 155 aa14.22□□□□□ -0.13
COL4A3-202ENST00000396578 ENDOD1O94919 500 aa14.22□□□□□ -0.13
COL4A3-202ENST00000396578 HIST1H2ABP04908 130 aa14.22□□□□□ -0.13
COL4A3-202ENST00000396578 FGFR1P11362 822 aa14.22□□□□□ -0.13
COL4A3-202ENST00000396578 CYP11B2P19099 503 aa14.22□□□□□ -0.13
COL4A3-202ENST00000396578 AP1S2P56377 157 aa14.22□□□□□ -0.13
COL4A3-202ENST00000396578 GMFBP60983 142 aa14.22□□□□□ -0.13
COL4A3-202ENST00000396578 SPDYCQ5MJ68 293 aa14.22□□□□□ -0.13
COL4A3-202ENST00000396578 HIST3H2AQ7L7L0 130 aa14.22□□□□□ -0.13
COL4A3-202ENST00000396578 LRRC17Q8N6Y2 441 aa14.22□□□□□ -0.13
COL4A3-202ENST00000396578 POC5Q8NA72 575 aa14.22□□□□□ -0.13
COL4A3-202ENST00000396578 ACTL9Q8TC94 416 aa14.22□□□□□ -0.13
COL4A3-202ENST00000396578 HIST1H2ACQ93077 130 aa14.22□□□□□ -0.13
COL4A3-202ENST00000396578 PLA2G12BQ9BX93 195 aa14.22□□□□□ -0.13
COL4A3-202ENST00000396578 RBM22Q9NW64 420 aaKnown RBP eCLIP14.22□□□□□ -0.13
COL4A3-202ENST00000396578 CBX4O00257 560 aa14.22□□□□□ -0.13
COL4A3-202ENST00000396578 KPNA5O15131 536 aa14.22□□□□□ -0.13
COL4A3-202ENST00000396578 MARC1Q5VT66 337 aa14.22□□□□□ -0.13
COL4A3-202ENST00000396578 CCDC80Q76M96 950 aa14.22□□□□□ -0.13
COL4A3-202ENST00000396578 GLT6D1Q7Z4J2 308 aa14.22□□□□□ -0.13
COL4A3-202ENST00000396578 MAGEB10Q96LZ2 347 aaPredicted RBP14.22□□□□□ -0.13
COL4A3-202ENST00000396578 CGRRF1Q99675 332 aa14.22□□□□□ -0.13
COL4A3-202ENST00000396578 DSN1Q9H410 356 aa14.22□□□□□ -0.13
COL4A3-202ENST00000396578 RNPEPL1Q9HAU8 725 aa14.22□□□□□ -0.13
COL4A3-202ENST00000396578 CAMSAP1Q5T5Y3 1602 aa14.22□□□□□ -0.13
COL4A3-202ENST00000396578 CHURC1-FNTBB4DL54 471 aa14.22□□□□□ -0.13
COL4A3-202ENST00000396578 SLC37A4O43826 429 aa14.22□□□□□ -0.13
COL4A3-202ENST00000396578 ALADP13716 330 aa14.22□□□□□ -0.13
COL4A3-202ENST00000396578 S100GP29377 79 aa14.22□□□□□ -0.13
COL4A3-202ENST00000396578 S100A3P33764 101 aa14.22□□□□□ -0.13
COL4A3-202ENST00000396578 SCNN1BP51168 640 aa14.22□□□□□ -0.13
COL4A3-202ENST00000396578 SKP1P63208 163 aa14.22□□□□□ -0.13
COL4A3-202ENST00000396578 OLFML2AQ68BL7 652 aa14.22□□□□□ -0.13
COL4A3-202ENST00000396578 IL27RAQ6UWB1 636 aa14.22□□□□□ -0.13
COL4A3-202ENST00000396578 FAM131BQ86XD5 332 aa14.22□□□□□ -0.13
COL4A3-202ENST00000396578 DCLK3Q9C098 648 aa14.22□□□□□ -0.13
COL4A3-202ENST00000396578 ZCCHC2Q9C0B9 1178 aaKnown RBP14.22□□□□□ -0.13
COL4A3-202ENST00000396578 TLR8Q9NR97 1041 aaKnown RBP14.22□□□□□ -0.13
COL4A3-202ENST00000396578 MCUBQ9NWR8 336 aa14.22□□□□□ -0.13
COL4A3-202ENST00000396578 RSL24D1Q9UHA3 163 aaKnown RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms