RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 NUDT13Q86X67 352 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 DCP2Q8IU60 420 aaKnown RBP3.67□□□□□ -1.82
XRN1-202ENST00000392981 TMEFF1Q8IYR6 380 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 TRIML2Q8N7C3 387 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 IL17RDQ8NFM7 739 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.67□□□□□ -1.82
XRN1-202ENST00000392981 ZFAND2BQ8WV99 257 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 AP2M1Q96CW1 435 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 ZNF837Q96EG3 531 aaPredicted RBP3.67□□□□□ -1.82
XRN1-202ENST00000392981 WDR11Q9BZH6 1224 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 VPS33BQ9H267 617 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 PLK3Q9H4B4 646 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 PDE11AQ9HCR9 933 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 MPP6Q9NZW5 540 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 IMPACTQ9P2X3 320 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 SLC12A4Q9UP95 1085 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 A0A0B4J293 547 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 EDDM13A0A1B0GTR0 161 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 NPIPB15A6NHN6 443 aaPredicted RBP3.67□□□□□ -1.82
XRN1-202ENST00000392981 PRR33A8MZF0 331 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 HNRNPCL2B2RXH8 293 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 PI4K2BG5E9Z4 385 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 H3BM21 787 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 IGF2BP3O00425 579 aaKnown RBP eCLIP3.67□□□□□ -1.82
XRN1-202ENST00000392981 RASGRF2O14827 1237 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 HBP1O60381 514 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 LEFTY1O75610 366 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 SEC14L2O76054 403 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 COX7A2P14406 83 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 PRLRP16471 622 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 TYMPP19971 482 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 STAT5BP51692 787 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 KCNQ1P51787 676 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 PGDP52209 483 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 F2RL1P55085 397 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 MGAT2Q10469 447 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 TBC1D25Q3MII6 688 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 LRRC73Q5JTD7 316 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 ABHD15Q6UXT9 468 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 CD300LDQ6UXZ3 194 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 PHLDB2Q86SQ0 1253 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 KBTBD6Q86V97 674 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 FBXO11Q86XK2 927 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 CCDC83Q8IWF9 413 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 HDDC3Q8N4P3 179 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 ZGPATQ8N5A5 531 aaKnown RBP3.67□□□□□ -1.82
XRN1-202ENST00000392981 CCDC155Q8N6L0 562 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 DCAF11Q8TEB1 546 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 SH3RF2Q8TEC5 729 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 PPP1R13LQ8WUF5 828 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 ZNF75CPQ92670 426 aaPredicted RBP3.67□□□□□ -1.82
XRN1-202ENST00000392981 RNF31Q96EP0 1072 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 NEIL1Q96FI4 390 aaPredicted RBP3.67□□□□□ -1.82
XRN1-202ENST00000392981 ZC3HAV1LQ96H79 300 aaKnown RBP3.67□□□□□ -1.82
XRN1-202ENST00000392981 C1orf74Q96LT6 269 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 TTPALQ9BTX7 342 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 POLR1BQ9H9Y6 1135 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 POLE3Q9NRF9 147 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 IARS2Q9NSE4 1012 aaKnown RBP3.67□□□□□ -1.82
XRN1-202ENST00000392981 CFAP65Q6ZU64 1925 aaKnown RBP3.67□□□□□ -1.82
XRN1-202ENST00000392981 TYW5A2RUC4 315 aaKnown RBP3.67□□□□□ -1.82
XRN1-202ENST00000392981 LIPT2A6NK58 231 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 C16orf96A6NNT2 1141 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 FAM25EA8MYX2 175 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 POLRMTO00411 1230 aaKnown RBP3.67□□□□□ -1.82
XRN1-202ENST00000392981 DNAJB6O75190 326 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 MLYCDO95822 493 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 TRUB2O95900 331 aaKnown RBP3.67□□□□□ -1.82
XRN1-202ENST00000392981 IL1AP01583 271 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 TPM3P06753 285 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 ANXA6P08133 673 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 EPORP19235 508 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 CDH3P22223 829 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 EPHA8P29322 1005 aaPredicted RBP3.67□□□□□ -1.82
XRN1-202ENST00000392981 SERPINB6P35237 376 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 PXNP49023 591 aaPredicted RBP3.67□□□□□ -1.82
XRN1-202ENST00000392981 CENPAP49450 140 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 VCPP55072 806 aaKnown RBP3.67□□□□□ -1.82
XRN1-202ENST00000392981 LILRA4P59901 499 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 OVGP1Q12889 678 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 BTG3Q14201 252 aaPredicted RBP3.67□□□□□ -1.82
XRN1-202ENST00000392981 ANO7Q6IWH7 933 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.67□□□□□ -1.82
XRN1-202ENST00000392981 ANO5Q75V66 913 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 ARMCX2Q7L311 632 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 STK32CQ86UX6 486 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 FAM181AQ8N9Y4 354 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 SLC22A18Q96BI1 424 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 MCRS1Q96EZ8 462 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 MRGPRX4Q96LA9 322 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 WDR92Q96MX6 357 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 ORAI2Q96SN7 254 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 NUP85Q9BW27 656 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 TAOK3Q9H2K8 898 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 ARHGAP20Q9P2F6 1191 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 LRIT1Q9P2V4 623 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 A0A0B4J203 849 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 ARNTLO00327 626 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 CYTIPO60759 359 aa3.67□□□□□ -1.82
XRN1-202ENST00000392981 OPHN1O60890 802 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms