RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 VPS4BO75351 444 aa20.08■□□□□ 0.81
SHANK1-203ENST00000391813 CHRM3P20309 590 aa20.08■□□□□ 0.81
SHANK1-203ENST00000391813 MAPK1P28482 360 aa20.08■□□□□ 0.81
SHANK1-203ENST00000391813 CD151P48509 253 aa20.08■□□□□ 0.81
SHANK1-203ENST00000391813 NME5P56597 212 aa20.08■□□□□ 0.81
SHANK1-203ENST00000391813 CSHL1Q14406 222 aa20.08■□□□□ 0.81
SHANK1-203ENST00000391813 ZNF846Q147U1 533 aa20.08■□□□□ 0.81
SHANK1-203ENST00000391813 AFG1LQ8WV93 481 aa20.08■□□□□ 0.81
SHANK1-203ENST00000391813 OTULINQ96BN8 352 aa20.08■□□□□ 0.81
SHANK1-203ENST00000391813 MMTAG2Q9BU76 263 aaKnown RBP20.08■□□□□ 0.81
SHANK1-203ENST00000391813 CCDC167Q9P0B6 97 aa20.08■□□□□ 0.81
SHANK1-203ENST00000391813 ONECUT3O60422 494 aaPredicted RBP20.08■□□□□ 0.8
SHANK1-203ENST00000391813 GJB6O95452 261 aa20.08■□□□□ 0.8
SHANK1-203ENST00000391813 ITGAVP06756 1048 aa20.08■□□□□ 0.8
SHANK1-203ENST00000391813 CAPN1P07384 714 aa20.08■□□□□ 0.8
SHANK1-203ENST00000391813 MARSP56192 900 aaKnown RBP20.08■□□□□ 0.8
SHANK1-203ENST00000391813 RHBDL3P58872 404 aa20.08■□□□□ 0.8
SHANK1-203ENST00000391813 TRIP4Q15650 581 aaPredicted RBP20.08■□□□□ 0.8
SHANK1-203ENST00000391813 TMEM26Q6ZUK4 368 aa20.08■□□□□ 0.8
SHANK1-203ENST00000391813 SLFN11Q7Z7L1 901 aa20.08■□□□□ 0.8
SHANK1-203ENST00000391813 FAM120BQ96EK7 910 aaKnown RBP20.08■□□□□ 0.8
SHANK1-203ENST00000391813 FAM198AQ9UFP1 575 aa20.08■□□□□ 0.8
SHANK1-203ENST00000391813 MYPNQ86TC9 1320 aa20.08■□□□□ 0.8
SHANK1-203ENST00000391813 PSMD12O00232 456 aaPredicted RBP20.08■□□□□ 0.8
SHANK1-203ENST00000391813 PIGNO95427 931 aa20.08■□□□□ 0.8
SHANK1-203ENST00000391813 DLG4P78352 724 aa20.08■□□□□ 0.8
SHANK1-203ENST00000391813 PTPN11Q06124 597 aaPredicted RBP20.08■□□□□ 0.8
SHANK1-203ENST00000391813 TAB1Q15750 504 aa20.08■□□□□ 0.8
SHANK1-203ENST00000391813 NIPA1Q7RTP0 329 aa20.08■□□□□ 0.8
SHANK1-203ENST00000391813 MKL1Q969V6 931 aa20.08■□□□□ 0.8
SHANK1-203ENST00000391813 EBF2Q9HAK2 575 aa20.08■□□□□ 0.8
SHANK1-203ENST00000391813 PRR23AA6NEV1 266 aa20.07■□□□□ 0.8
SHANK1-203ENST00000391813 CYP2F1P24903 491 aa20.07■□□□□ 0.8
SHANK1-203ENST00000391813 GALK1P51570 392 aa20.07■□□□□ 0.8
SHANK1-203ENST00000391813 SKIV2LQ15477 1246 aaKnown RBP20.07■□□□□ 0.8
SHANK1-203ENST00000391813 TTC30AQ86WT1 665 aa20.07■□□□□ 0.8
SHANK1-203ENST00000391813 MIER2Q8N344 545 aa20.07■□□□□ 0.8
SHANK1-203ENST00000391813 MTMR12Q9C0I1 747 aa20.07■□□□□ 0.8
SHANK1-203ENST00000391813 STARD7Q9NQZ5 370 aa20.07■□□□□ 0.8
SHANK1-203ENST00000391813 TAS2R14Q9NYV8 317 aa20.07■□□□□ 0.8
SHANK1-203ENST00000391813 AP3M1Q9Y2T2 418 aa20.07■□□□□ 0.8
SHANK1-203ENST00000391813 ITGB3P05106 788 aa20.07■□□□□ 0.8
SHANK1-203ENST00000391813 VCLP18206 1134 aa20.07■□□□□ 0.8
SHANK1-203ENST00000391813 PCSK1P29120 753 aa20.07■□□□□ 0.8
SHANK1-203ENST00000391813 NNMTP40261 264 aa20.07■□□□□ 0.8
SHANK1-203ENST00000391813 SLC12A3P55017 1021 aa20.07■□□□□ 0.8
SHANK1-203ENST00000391813 TAF5Q15542 800 aa20.07■□□□□ 0.8
SHANK1-203ENST00000391813 PDZK1Q5T2W1 519 aa20.07■□□□□ 0.8
SHANK1-203ENST00000391813 ARMC3Q5W041 872 aa20.07■□□□□ 0.8
SHANK1-203ENST00000391813 WDR12Q9GZL7 423 aaKnown RBP20.07■□□□□ 0.8
SHANK1-203ENST00000391813 GPATCH2LQ9NWQ4 482 aa20.07■□□□□ 0.8
SHANK1-203ENST00000391813 ENOPH1Q9UHY7 261 aa20.07■□□□□ 0.8
SHANK1-203ENST00000391813 IFT172Q9UG01 1749 aa20.07■□□□□ 0.8
SHANK1-203ENST00000391813 PTGES3LE9PB15 166 aa20.07■□□□□ 0.8
SHANK1-203ENST00000391813 M0QYT0 321 aa20.07■□□□□ 0.8
SHANK1-203ENST00000391813 AREL1O15033 823 aa20.07■□□□□ 0.8
SHANK1-203ENST00000391813 RAD51BO15315 384 aa20.07■□□□□ 0.8
SHANK1-203ENST00000391813 MSCO60682 206 aa20.07■□□□□ 0.8
SHANK1-203ENST00000391813 ZSCAN5DPP0CG00 497 aa20.07■□□□□ 0.8
SHANK1-203ENST00000391813 MSH3P20585 1137 aa20.07■□□□□ 0.8
SHANK1-203ENST00000391813 TALDO1P37837 337 aa20.07■□□□□ 0.8
SHANK1-203ENST00000391813 NPY2RP49146 381 aa20.07■□□□□ 0.8
SHANK1-203ENST00000391813 ARHGAP17Q68EM7 881 aa20.07■□□□□ 0.8
SHANK1-203ENST00000391813 KCNK18Q7Z418 384 aa20.07■□□□□ 0.8
SHANK1-203ENST00000391813 ALG3Q92685 438 aa20.07■□□□□ 0.8
SHANK1-203ENST00000391813 UBXN6Q9BZV1 441 aa20.07■□□□□ 0.8
SHANK1-203ENST00000391813 KRT6BP04259 564 aa20.07■□□□□ 0.8
SHANK1-203ENST00000391813 EIF4BP23588 611 aaKnown RBP20.07■□□□□ 0.8
SHANK1-203ENST00000391813 PIK3R1P27986 724 aa20.07■□□□□ 0.8
SHANK1-203ENST00000391813 LRPAP1P30533 357 aa20.07■□□□□ 0.8
SHANK1-203ENST00000391813 PNPLA4P41247 253 aa20.07■□□□□ 0.8
SHANK1-203ENST00000391813 KRT6CP48668 564 aa20.07■□□□□ 0.8
SHANK1-203ENST00000391813 PKN3Q6P5Z2 889 aa20.07■□□□□ 0.8
SHANK1-203ENST00000391813 KBTBD2Q8IY47 623 aa20.07■□□□□ 0.8
SHANK1-203ENST00000391813 DCUN1D1Q96GG9 259 aa20.07■□□□□ 0.8
SHANK1-203ENST00000391813 CLEC4MQ9H2X3 399 aaPredicted RBP20.07■□□□□ 0.8
SHANK1-203ENST00000391813 RAB26Q9ULW5 256 aa20.07■□□□□ 0.8
SHANK1-203ENST00000391813 SPDYE5A6NIY4 337 aa20.06■□□□□ 0.8
SHANK1-203ENST00000391813 VPS26AO75436 327 aa20.06■□□□□ 0.8
SHANK1-203ENST00000391813 CDH17Q12864 832 aa20.06■□□□□ 0.8
SHANK1-203ENST00000391813 SPDYE7PQ495Y7 208 aa20.06■□□□□ 0.8
SHANK1-203ENST00000391813 SV2CQ496J9 727 aa20.06■□□□□ 0.8
SHANK1-203ENST00000391813 DCP1BQ8IZD4 617 aaKnown RBP20.06■□□□□ 0.8
SHANK1-203ENST00000391813 ENKURQ8TC29 256 aa20.06■□□□□ 0.8
SHANK1-203ENST00000391813 PSME3P61289 254 aa20.06■□□□□ 0.8
SHANK1-203ENST00000391813 GALNTL6Q49A17 601 aa20.06■□□□□ 0.8
SHANK1-203ENST00000391813 TRIQKQ629K1 86 aa20.06■□□□□ 0.8
SHANK1-203ENST00000391813 FBXO16Q8IX29 292 aaPredicted RBP20.06■□□□□ 0.8
SHANK1-203ENST00000391813 GSTCDQ8NEC7 633 aa20.06■□□□□ 0.8
SHANK1-203ENST00000391813 DNAJC19Q96DA6 116 aa20.06■□□□□ 0.8
SHANK1-203ENST00000391813 ITGA11Q9UKX5 1188 aa20.06■□□□□ 0.8
SHANK1-203ENST00000391813 TMEM114B3SHH9 223 aa20.06■□□□□ 0.8
SHANK1-203ENST00000391813 HDAC3O15379 428 aa20.06■□□□□ 0.8
SHANK1-203ENST00000391813 ATG7O95352 703 aa20.06■□□□□ 0.8
SHANK1-203ENST00000391813 ISLR2Q6UXK2 745 aa20.06■□□□□ 0.8
SHANK1-203ENST00000391813 FAM71AQ8IYT1 594 aa20.06■□□□□ 0.8
SHANK1-203ENST00000391813 CERS5Q8N5B7 392 aa20.06■□□□□ 0.8
SHANK1-203ENST00000391813 HTR3CQ8WXA8 447 aa20.06■□□□□ 0.8
SHANK1-203ENST00000391813 C8orf4Q9NR00 106 aa20.06■□□□□ 0.8
SHANK1-203ENST00000391813 LMCD1Q9NZU5 365 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms