RNA–Protein interactions for RNA: ENST00000390996.1

RNU6-1009P-201, Transcript of RNA, U6 small nuclear 1009, pseudogene, humanhuman

BASIC

Gene RNU6-1009P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1009P-201ENST00000390996 SPRY4Q9C004 299 aa3.35□□□□□ -1.87
RNU6-1009P-201ENST00000390996 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.35□□□□□ -1.87
RNU6-1009P-201ENST00000390996 TRIP12Q14669 1992 aaPredicted RBP3.34□□□□□ -1.87
RNU6-1009P-201ENST00000390996 IGFBP2P18065 325 aa3.34□□□□□ -1.87
RNU6-1009P-201ENST00000390996 IBSPP21815 317 aaPredicted RBP3.34□□□□□ -1.87
RNU6-1009P-201ENST00000390996 DAG1Q14118 895 aa3.34□□□□□ -1.87
RNU6-1009P-201ENST00000390996 DUSP6Q16828 381 aa3.34□□□□□ -1.87
RNU6-1009P-201ENST00000390996 WBP2NLQ6ICG8 309 aa3.34□□□□□ -1.87
RNU6-1009P-201ENST00000390996 CYB5RLQ6IPT4 315 aa3.34□□□□□ -1.87
RNU6-1009P-201ENST00000390996 MSANTD2Q6P1R3 559 aa3.34□□□□□ -1.87
RNU6-1009P-201ENST00000390996 MEX3BQ6ZN04 569 aaKnown RBP3.34□□□□□ -1.87
RNU6-1009P-201ENST00000390996 Q6ZSV7 163 aa3.34□□□□□ -1.87
RNU6-1009P-201ENST00000390996 CREB3L2Q70SY1 520 aa3.34□□□□□ -1.87
RNU6-1009P-201ENST00000390996 TCEAL8Q8IYN2 117 aa3.34□□□□□ -1.87
RNU6-1009P-201ENST00000390996 SLC25A41Q8N5S1 370 aa3.34□□□□□ -1.87
RNU6-1009P-201ENST00000390996 MAGEB6Q8N7X4 407 aa3.34□□□□□ -1.87
RNU6-1009P-201ENST00000390996 LRRC46Q96FV0 321 aa3.34□□□□□ -1.87
RNU6-1009P-201ENST00000390996 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.34□□□□□ -1.87
RNU6-1009P-201ENST00000390996 PNRC2Q9NPJ4 139 aaKnown RBP3.34□□□□□ -1.87
RNU6-1009P-201ENST00000390996 PCDHB7Q9Y5E2 793 aa3.34□□□□□ -1.87
RNU6-1009P-201ENST00000390996 NPC1O15118 1278 aa3.33□□□□□ -1.88
RNU6-1009P-201ENST00000390996 KRT36O76013 467 aa3.33□□□□□ -1.88
RNU6-1009P-201ENST00000390996 LCKP06239 509 aa3.33□□□□□ -1.88
RNU6-1009P-201ENST00000390996 PMS2P54278 862 aa3.33□□□□□ -1.88
RNU6-1009P-201ENST00000390996 SHC2P98077 582 aa3.33□□□□□ -1.88
RNU6-1009P-201ENST00000390996 ILF3Q12906 894 aaKnown RBP eCLIP3.33□□□□□ -1.88
RNU6-1009P-201ENST00000390996 CBFBQ13951 182 aa3.33□□□□□ -1.88
RNU6-1009P-201ENST00000390996 GALEQ14376 348 aa3.33□□□□□ -1.88
RNU6-1009P-201ENST00000390996 ZRSR1Q15695 479 aaKnown RBP3.33□□□□□ -1.88
RNU6-1009P-201ENST00000390996 SLC5A9Q2M3M2 681 aa3.33□□□□□ -1.88
RNU6-1009P-201ENST00000390996 KRT71Q3SY84 523 aa3.33□□□□□ -1.88
RNU6-1009P-201ENST00000390996 H1FNTQ75WM6 255 aaPredicted RBP3.33□□□□□ -1.88
RNU6-1009P-201ENST00000390996 MDGA2Q7Z553 956 aa3.33□□□□□ -1.88
RNU6-1009P-201ENST00000390996 ATP11CQ8NB49 1132 aa3.33□□□□□ -1.88
RNU6-1009P-201ENST00000390996 SRFBP1Q8NEF9 429 aaKnown RBP3.33□□□□□ -1.88
RNU6-1009P-201ENST00000390996 PHKBQ93100 1093 aa3.33□□□□□ -1.88
RNU6-1009P-201ENST00000390996 PKP4Q99569 1192 aa3.33□□□□□ -1.88
RNU6-1009P-201ENST00000390996 EIF3CQ99613 913 aaKnown RBP3.33□□□□□ -1.88
RNU6-1009P-201ENST00000390996 PAAF1Q9BRP4 392 aa3.33□□□□□ -1.88
RNU6-1009P-201ENST00000390996 CATSPERBQ9H7T0 1116 aa3.33□□□□□ -1.88
RNU6-1009P-201ENST00000390996 RNF146Q9NTX7 359 aa3.33□□□□□ -1.88
RNU6-1009P-201ENST00000390996 ZMYND8Q9ULU4 1186 aaPredicted RBP3.33□□□□□ -1.88
RNU6-1009P-201ENST00000390996 UBE2J1Q9Y385 318 aaPredicted RBP3.33□□□□□ -1.88
RNU6-1009P-201ENST00000390996 NOTCH3Q9UM47 2321 aa3.33□□□□□ -1.88
RNU6-1009P-201ENST00000390996 PLSCR5A0PG75 271 aa3.32□□□□□ -1.88
RNU6-1009P-201ENST00000390996 SCGB1D2O95969 90 aa3.32□□□□□ -1.88
RNU6-1009P-201ENST00000390996 SP1P08047 785 aa3.32□□□□□ -1.88
RNU6-1009P-201ENST00000390996 PECAM1P16284 738 aaPredicted RBP3.32□□□□□ -1.88
RNU6-1009P-201ENST00000390996 CHRNB2P17787 502 aa3.32□□□□□ -1.88
RNU6-1009P-201ENST00000390996 ITGB8P26012 769 aa3.32□□□□□ -1.88
RNU6-1009P-201ENST00000390996 GABRB3P28472 473 aa3.32□□□□□ -1.88
RNU6-1009P-201ENST00000390996 TRAF3Q13114 568 aa3.32□□□□□ -1.88
RNU6-1009P-201ENST00000390996 GRM3Q14832 879 aa3.32□□□□□ -1.88
RNU6-1009P-201ENST00000390996 ARHGAP15Q53QZ3 475 aa3.32□□□□□ -1.88
RNU6-1009P-201ENST00000390996 TDRD12Q587J7 1177 aaKnown RBP3.32□□□□□ -1.88
RNU6-1009P-201ENST00000390996 ZNF367Q7RTV3 350 aa3.32□□□□□ -1.88
RNU6-1009P-201ENST00000390996 KRT27Q7Z3Y8 459 aa3.32□□□□□ -1.88
RNU6-1009P-201ENST00000390996 RFLNBQ8N5W9 214 aa3.32□□□□□ -1.88
RNU6-1009P-201ENST00000390996 IP6K1Q92551 441 aa3.32□□□□□ -1.88
RNU6-1009P-201ENST00000390996 RTP4Q96DX8 246 aa3.32□□□□□ -1.88
RNU6-1009P-201ENST00000390996 ZNF419Q96HQ0 510 aaPredicted RBP3.32□□□□□ -1.88
RNU6-1009P-201ENST00000390996 INPP4AQ96PE3 977 aaPredicted RBP3.32□□□□□ -1.88
RNU6-1009P-201ENST00000390996 GDF15Q99988 308 aa3.32□□□□□ -1.88
RNU6-1009P-201ENST00000390996 POLDIP3Q9BY77 421 aaKnown RBP3.32□□□□□ -1.88
RNU6-1009P-201ENST00000390996 MAGEB5Q9BZ81 275 aa3.32□□□□□ -1.88
RNU6-1009P-201ENST00000390996 PCDHAC1Q9H158 963 aa3.32□□□□□ -1.88
RNU6-1009P-201ENST00000390996 RETREG1Q9H6L5 497 aa3.32□□□□□ -1.88
RNU6-1009P-201ENST00000390996 FSCN3Q9NQT6 498 aa3.32□□□□□ -1.88
RNU6-1009P-201ENST00000390996 FBXO28Q9NVF7 368 aa3.32□□□□□ -1.88
RNU6-1009P-201ENST00000390996 LMTK3Q96Q04 1460 aa3.31□□□□□ -1.88
RNU6-1009P-201ENST00000390996 TRBV5-7A0A0A0MS05 114 aa3.31□□□□□ -1.88
RNU6-1009P-201ENST00000390996 KCNJ18B7U540 433 aa3.31□□□□□ -1.88
RNU6-1009P-201ENST00000390996 MSI1O43347 362 aaKnown RBP3.31□□□□□ -1.88
RNU6-1009P-201ENST00000390996 IGLV2-11P01706 119 aa3.31□□□□□ -1.88
RNU6-1009P-201ENST00000390996 MYL4P12829 197 aa3.31□□□□□ -1.88
RNU6-1009P-201ENST00000390996 FGFR2P21802 821 aa3.31□□□□□ -1.88
RNU6-1009P-201ENST00000390996 TNFSF8P32971 234 aa3.31□□□□□ -1.88
RNU6-1009P-201ENST00000390996 SLC16A2P36021 539 aa3.31□□□□□ -1.88
RNU6-1009P-201ENST00000390996 POU3F1Q03052 451 aaPredicted RBP3.31□□□□□ -1.88
RNU6-1009P-201ENST00000390996 GRSF1Q12849 480 aaKnown RBP eCLIP3.31□□□□□ -1.88
RNU6-1009P-201ENST00000390996 GALNT3Q14435 633 aa3.31□□□□□ -1.88
RNU6-1009P-201ENST00000390996 HNF4GQ14541 408 aa3.31□□□□□ -1.88
RNU6-1009P-201ENST00000390996 GBX1Q14549 363 aa3.31□□□□□ -1.88
RNU6-1009P-201ENST00000390996 P3H1Q32P28 736 aa3.31□□□□□ -1.88
RNU6-1009P-201ENST00000390996 ALG10Q5BKT4 473 aa3.31□□□□□ -1.88
RNU6-1009P-201ENST00000390996 ALG10BQ5I7T1 473 aa3.31□□□□□ -1.88
RNU6-1009P-201ENST00000390996 C10orf76Q5T2E6 689 aa3.31□□□□□ -1.88
RNU6-1009P-201ENST00000390996 KLHDC7AQ5VTJ3 777 aa3.31□□□□□ -1.88
RNU6-1009P-201ENST00000390996 WDR93Q6P2C0 686 aa3.31□□□□□ -1.88
RNU6-1009P-201ENST00000390996 FAM217AQ8IXS0 508 aa3.31□□□□□ -1.88
RNU6-1009P-201ENST00000390996 RNF152Q8N8N0 203 aa3.31□□□□□ -1.88
RNU6-1009P-201ENST00000390996 ADPRHL1Q8NDY3 354 aa3.31□□□□□ -1.88
RNU6-1009P-201ENST00000390996 TAF15Q92804 592 aaKnown RBP eCLIP3.31□□□□□ -1.88
RNU6-1009P-201ENST00000390996 GRAMD1AQ96CP6 724 aa3.31□□□□□ -1.88
RNU6-1009P-201ENST00000390996 B3GNT4Q9C0J1 378 aa3.31□□□□□ -1.88
RNU6-1009P-201ENST00000390996 IL25Q9H293 177 aa3.31□□□□□ -1.88
RNU6-1009P-201ENST00000390996 SFXN1Q9H9B4 322 aa3.31□□□□□ -1.88
RNU6-1009P-201ENST00000390996 ZNF304Q9HCX3 659 aa3.31□□□□□ -1.88
RNU6-1009P-201ENST00000390996 PNPLA8Q9NP80 782 aa3.31□□□□□ -1.88
RNU6-1009P-201ENST00000390996 PCDHGB6Q9Y5F9 930 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms