RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 ICAM1P05362 532 aa15□□□□□ -0.01
VPS9D1-201ENST00000389386 ME2P23368 584 aa15□□□□□ -0.01
VPS9D1-201ENST00000389386 HARS2P49590 506 aaKnown RBP15□□□□□ -0.01
VPS9D1-201ENST00000389386 CYP24A1Q07973 514 aa15□□□□□ -0.01
VPS9D1-201ENST00000389386 SPP2Q13103 211 aa15□□□□□ -0.01
VPS9D1-201ENST00000389386 PCLAFQ15004 111 aa15□□□□□ -0.01
VPS9D1-201ENST00000389386 AARS2Q5JTZ9 985 aaKnown RBP15□□□□□ -0.01
VPS9D1-201ENST00000389386 N4BP2L1Q5TBK1 243 aaPredicted RBP15□□□□□ -0.01
VPS9D1-201ENST00000389386 FKBP1CQ5VVH2 108 aa15□□□□□ -0.01
VPS9D1-201ENST00000389386 MIER3Q7Z3K6 550 aa15□□□□□ -0.01
VPS9D1-201ENST00000389386 SNX32Q86XE0 403 aa15□□□□□ -0.01
VPS9D1-201ENST00000389386 TRUB1Q8WWH5 349 aaKnown RBP15□□□□□ -0.01
VPS9D1-201ENST00000389386 NSMCE3Q96MG7 304 aa15□□□□□ -0.01
VPS9D1-201ENST00000389386 SLC29A1Q99808 456 aa15□□□□□ -0.01
VPS9D1-201ENST00000389386 SLC4A5Q9BY07 1137 aa15□□□□□ -0.01
VPS9D1-201ENST00000389386 SEMA6AQ9H2E6 1030 aa15□□□□□ -0.01
VPS9D1-201ENST00000389386 COG4Q9H9E3 785 aa15□□□□□ -0.01
VPS9D1-201ENST00000389386 RGSL1A5PLK6 1076 aa15□□□□□ -0.01
VPS9D1-201ENST00000389386 EIF3FO00303 357 aaPredicted RBP15□□□□□ -0.01
VPS9D1-201ENST00000389386 PLIN3O60664 434 aa15□□□□□ -0.01
VPS9D1-201ENST00000389386 LDHAP00338 332 aaKnown RBP15□□□□□ -0.01
VPS9D1-201ENST00000389386 DCKP27707 260 aa15□□□□□ -0.01
VPS9D1-201ENST00000389386 PIK3R1P27986 724 aa15□□□□□ -0.01
VPS9D1-201ENST00000389386 GNA15P30679 374 aa15□□□□□ -0.01
VPS9D1-201ENST00000389386 SERPINB5P36952 375 aa15□□□□□ -0.01
VPS9D1-201ENST00000389386 NEK2P51955 445 aa15□□□□□ -0.01
VPS9D1-201ENST00000389386 MRPS9P82933 396 aaKnown RBP15□□□□□ -0.01
VPS9D1-201ENST00000389386 PIGHQ14442 188 aaPredicted RBP15□□□□□ -0.01
VPS9D1-201ENST00000389386 TAZQ16635 292 aa15□□□□□ -0.01
VPS9D1-201ENST00000389386 PHKG1Q16816 387 aa15□□□□□ -0.01
VPS9D1-201ENST00000389386 C10orf107Q8IVU9 208 aa15□□□□□ -0.01
VPS9D1-201ENST00000389386 SLC15A4Q8N697 577 aa15□□□□□ -0.01
VPS9D1-201ENST00000389386 USP13Q92995 863 aaPredicted RBP15□□□□□ -0.01
VPS9D1-201ENST00000389386 ATP6V0A1Q93050 837 aa15□□□□□ -0.01
VPS9D1-201ENST00000389386 EFHD2Q96C19 240 aaPredicted RBP15□□□□□ -0.01
VPS9D1-201ENST00000389386 UNKQ9C0B0 810 aaKnown RBP15□□□□□ -0.01
VPS9D1-201ENST00000389386 B3GNT3Q9Y2A9 372 aa15□□□□□ -0.01
VPS9D1-201ENST00000389386 AP4S1Q9Y587 144 aa15□□□□□ -0.01
VPS9D1-201ENST00000389386 CHADO15335 359 aa14.99□□□□□ -0.01
VPS9D1-201ENST00000389386 CFLARO15519 480 aa14.99□□□□□ -0.01
VPS9D1-201ENST00000389386 ERBB2P04626 1255 aa14.99□□□□□ -0.01
VPS9D1-201ENST00000389386 GLDCP23378 1020 aa14.99□□□□□ -0.01
VPS9D1-201ENST00000389386 DPP6P42658 865 aa14.99□□□□□ -0.01
VPS9D1-201ENST00000389386 ABCE1P61221 599 aaKnown RBP14.99□□□□□ -0.01
VPS9D1-201ENST00000389386 RPS6P62753 249 aaKnown RBP14.99□□□□□ -0.01
VPS9D1-201ENST00000389386 CAMK2BQ13554 666 aa14.99□□□□□ -0.01
VPS9D1-201ENST00000389386 TNFAIP1Q13829 316 aa14.99□□□□□ -0.01
VPS9D1-201ENST00000389386 SLC9B1Q4ZJI4 515 aa14.99□□□□□ -0.01
VPS9D1-201ENST00000389386 BRDTQ58F21 947 aaPredicted RBP14.99□□□□□ -0.01
VPS9D1-201ENST00000389386 PPM1LQ5SGD2 360 aa14.99□□□□□ -0.01
VPS9D1-201ENST00000389386 DCUN1D2Q6PH85 259 aa14.99□□□□□ -0.01
VPS9D1-201ENST00000389386 FBXL18Q96ME1 805 aa14.99□□□□□ -0.01
VPS9D1-201ENST00000389386 FERMT1Q9BQL6 677 aa14.99□□□□□ -0.01
VPS9D1-201ENST00000389386 RIPK3Q9Y572 518 aa14.99□□□□□ -0.01
VPS9D1-201ENST00000389386 NOX1Q9Y5S8 564 aa14.99□□□□□ -0.01
VPS9D1-201ENST00000389386 CNTNAP2Q9UHC6 1331 aa14.99□□□□□ -0.01
VPS9D1-201ENST00000389386 FAM159BA6NKW6 160 aa14.99□□□□□ -0.01
VPS9D1-201ENST00000389386 SERPINB9P50453 376 aa14.99□□□□□ -0.01
VPS9D1-201ENST00000389386 GALNT2Q10471 571 aa14.99□□□□□ -0.01
VPS9D1-201ENST00000389386 KCNJ8Q15842 424 aa14.99□□□□□ -0.01
VPS9D1-201ENST00000389386 FAM182AQ5T1J6 154 aa14.99□□□□□ -0.01
VPS9D1-201ENST00000389386 TRMT10BQ6PF06 316 aaKnown RBP14.99□□□□□ -0.01
VPS9D1-201ENST00000389386 B3GNT9Q6UX72 402 aa14.99□□□□□ -0.01
VPS9D1-201ENST00000389386 MAMDC4Q6UXC1 1216 aa14.99□□□□□ -0.01
VPS9D1-201ENST00000389386 FAM47BQ8NA70 645 aa14.99□□□□□ -0.01
VPS9D1-201ENST00000389386 ATP6V1E2Q96A05 226 aa14.99□□□□□ -0.01
VPS9D1-201ENST00000389386 FAF2Q96CS3 445 aa14.99□□□□□ -0.01
VPS9D1-201ENST00000389386 ERLEC1Q96DZ1 483 aa14.99□□□□□ -0.01
VPS9D1-201ENST00000389386 OLFM1Q99784 485 aa14.99□□□□□ -0.01
VPS9D1-201ENST00000389386 NPLQ9BXD5 320 aaPredicted RBP14.99□□□□□ -0.01
VPS9D1-201ENST00000389386 PTBP2Q9UKA9 531 aaKnown RBP14.99□□□□□ -0.01
VPS9D1-201ENST00000389386 SYNPO2Q9UMS6 1093 aa14.99□□□□□ -0.01
VPS9D1-201ENST00000389386 SLC30A1Q9Y6M5 507 aa14.99□□□□□ -0.01
VPS9D1-201ENST00000389386 CFAP99D6REC4 459 aa14.98□□□□□ -0.01
VPS9D1-201ENST00000389386 HTRA2O43464 458 aaPredicted RBP14.98□□□□□ -0.01
VPS9D1-201ENST00000389386 MCF2P10911 925 aa14.98□□□□□ -0.01
VPS9D1-201ENST00000389386 SP4Q02446 784 aa14.98□□□□□ -0.01
VPS9D1-201ENST00000389386 ITGADQ13349 1161 aa14.98□□□□□ -0.01
VPS9D1-201ENST00000389386 SMTNL2Q2TAL5 461 aa14.98□□□□□ -0.01
VPS9D1-201ENST00000389386 GPR107Q5VW38 600 aa14.98□□□□□ -0.01
VPS9D1-201ENST00000389386 PPP1R2P3Q6NXS1 205 aa14.98□□□□□ -0.01
VPS9D1-201ENST00000389386 DNAJC24Q6P3W2 148 aa14.98□□□□□ -0.01
VPS9D1-201ENST00000389386 UNC5AQ6ZN44 842 aa14.98□□□□□ -0.01
VPS9D1-201ENST00000389386 C15orf39Q6ZRI6 1047 aa14.98□□□□□ -0.01
VPS9D1-201ENST00000389386 CAND1Q86VP6 1230 aaKnown RBP14.98□□□□□ -0.01
VPS9D1-201ENST00000389386 NIPA2Q8N8Q9 360 aa14.98□□□□□ -0.01
VPS9D1-201ENST00000389386 ZNF516Q92618 1163 aa14.98□□□□□ -0.01
VPS9D1-201ENST00000389386 TAMM41Q96BW9 452 aa14.98□□□□□ -0.01
VPS9D1-201ENST00000389386 ANKRD36BP1Q96IX9 119 aa14.98□□□□□ -0.01
VPS9D1-201ENST00000389386 RPAP3Q9H6T3 665 aaPredicted RBP14.98□□□□□ -0.01
VPS9D1-201ENST00000389386 AFG3L2Q9Y4W6 797 aa14.98□□□□□ -0.01
VPS9D1-201ENST00000389386 STX16-NPEPL1H3BU86 382 aa14.98□□□□□ -0.01
VPS9D1-201ENST00000389386 KDELR1P24390 212 aa14.98□□□□□ -0.01
VPS9D1-201ENST00000389386 HSD17B4P51659 736 aa14.98□□□□□ -0.01
VPS9D1-201ENST00000389386 UGCGQ16739 394 aa14.98□□□□□ -0.01
VPS9D1-201ENST00000389386 NHSL2Q5HYW2 709 aa14.98□□□□□ -0.01
VPS9D1-201ENST00000389386 TMEM270Q6UE05 265 aa14.98□□□□□ -0.01
VPS9D1-201ENST00000389386 PGAM4Q8N0Y7 254 aa14.98□□□□□ -0.01
VPS9D1-201ENST00000389386 ZSCAN18Q8TBC5 510 aaPredicted RBP14.98□□□□□ -0.01
VPS9D1-201ENST00000389386 SYTL5Q8TDW5 730 aaPredicted RBP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms