RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 SLC2A11Q9BYW1 496 aa13.03□□□□□ -0.32
SMN1-202ENST00000380707 KCND1Q9NSA2 647 aa13.03□□□□□ -0.32
SMN1-202ENST00000380707 NDFIP2Q9NV92 336 aa13.03□□□□□ -0.32
SMN1-202ENST00000380707 DDX56Q9NY93 547 aaKnown RBP13.03□□□□□ -0.32
SMN1-202ENST00000380707 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.03□□□□□ -0.32
SMN1-202ENST00000380707 DEC1Q9P2X7 70 aa13.03□□□□□ -0.32
SMN1-202ENST00000380707 PCDHA3Q9Y5H8 950 aa13.03□□□□□ -0.32
SMN1-202ENST00000380707 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.03□□□□□ -0.32
SMN1-202ENST00000380707 CCDC66A2RUB6 948 aa13.03□□□□□ -0.32
SMN1-202ENST00000380707 LRRD1A4D1F6 860 aa13.03□□□□□ -0.32
SMN1-202ENST00000380707 KRT1P04264 644 aa13.03□□□□□ -0.32
SMN1-202ENST00000380707 RHOQP17081 205 aa13.03□□□□□ -0.32
SMN1-202ENST00000380707 CTNNA2P26232 953 aa13.03□□□□□ -0.32
SMN1-202ENST00000380707 HLA-FP30511 346 aa13.03□□□□□ -0.32
SMN1-202ENST00000380707 CD70P32970 193 aa13.03□□□□□ -0.32
SMN1-202ENST00000380707 HTR7P34969 479 aa13.03□□□□□ -0.32
SMN1-202ENST00000380707 DGKGP49619 791 aa13.03□□□□□ -0.32
SMN1-202ENST00000380707 ZNF135P52742 658 aaPredicted RBP13.03□□□□□ -0.32
SMN1-202ENST00000380707 STARD6P59095 220 aa13.03□□□□□ -0.32
SMN1-202ENST00000380707 PRKCQQ04759 706 aa13.03□□□□□ -0.32
SMN1-202ENST00000380707 KDSRQ06136 332 aa13.03□□□□□ -0.32
SMN1-202ENST00000380707 SIGLEC14Q08ET2 396 aa13.03□□□□□ -0.32
SMN1-202ENST00000380707 ZNF177Q13360 481 aaPredicted RBP13.03□□□□□ -0.32
SMN1-202ENST00000380707 CDH18Q13634 790 aa13.03□□□□□ -0.32
SMN1-202ENST00000380707 DPYSQ14117 519 aa13.03□□□□□ -0.32
SMN1-202ENST00000380707 PDK2Q15119 407 aa13.03□□□□□ -0.32
SMN1-202ENST00000380707 MEI1Q5TIA1 1274 aa13.03□□□□□ -0.32
SMN1-202ENST00000380707 CXorf57Q6NSI4 855 aaKnown RBP13.03□□□□□ -0.32
SMN1-202ENST00000380707 ANKS1BQ7Z6G8 1248 aa13.03□□□□□ -0.32
SMN1-202ENST00000380707 MAP7D3Q8IWC1 876 aa13.03□□□□□ -0.32
SMN1-202ENST00000380707 SFTPA1Q8IWL2 248 aa13.03□□□□□ -0.32
SMN1-202ENST00000380707 KATNAL2Q8IYT4 538 aa13.03□□□□□ -0.32
SMN1-202ENST00000380707 TRIM58Q8NG06 486 aa13.03□□□□□ -0.32
SMN1-202ENST00000380707 OR52K2Q8NGK3 314 aa13.03□□□□□ -0.32
SMN1-202ENST00000380707 FAM3CQ92520 227 aa13.03□□□□□ -0.32
SMN1-202ENST00000380707 ALG3Q92685 438 aa13.03□□□□□ -0.32
SMN1-202ENST00000380707 RNF25Q96BH1 459 aaPredicted RBP13.03□□□□□ -0.32
SMN1-202ENST00000380707 TRIM44Q96DX7 344 aaPredicted RBP13.03□□□□□ -0.32
SMN1-202ENST00000380707 HES6Q96HZ4 224 aa13.03□□□□□ -0.32
SMN1-202ENST00000380707 LMLNQ96KR4 655 aa13.03□□□□□ -0.32
SMN1-202ENST00000380707 PNKPQ96T60 521 aa13.03□□□□□ -0.32
SMN1-202ENST00000380707 ABCB8Q9NUT2 735 aa13.03□□□□□ -0.32
SMN1-202ENST00000380707 TMEM248Q9NWD8 314 aa13.03□□□□□ -0.32
SMN1-202ENST00000380707 TBC1D30Q9Y2I9 924 aa13.03□□□□□ -0.32
SMN1-202ENST00000380707 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.03□□□□□ -0.32
SMN1-202ENST00000380707 DOCK4Q8N1I0 1966 aa13.02□□□□□ -0.32
SMN1-202ENST00000380707 GOLGA6L9A6NEM1 432 aa13.02□□□□□ -0.33
SMN1-202ENST00000380707 H3BRJ5 948 aa13.02□□□□□ -0.33
SMN1-202ENST00000380707 MAN2B1O00754 1011 aa13.02□□□□□ -0.33
SMN1-202ENST00000380707 FGF10O15520 208 aaPredicted RBP13.02□□□□□ -0.33
SMN1-202ENST00000380707 DAPK3O43293 454 aa13.02□□□□□ -0.33
SMN1-202ENST00000380707 ALADP13716 330 aa13.02□□□□□ -0.33
SMN1-202ENST00000380707 ERCC2P18074 760 aa13.02□□□□□ -0.33
SMN1-202ENST00000380707 AMPD1P23109 780 aa13.02□□□□□ -0.33
SMN1-202ENST00000380707 OR1E1P30953 314 aa13.02□□□□□ -0.33
SMN1-202ENST00000380707 ARL4AP40617 200 aa13.02□□□□□ -0.33
SMN1-202ENST00000380707 LMAN2Q12907 356 aa13.02□□□□□ -0.33
SMN1-202ENST00000380707 ANKRD20A8PQ5CZ79 823 aa13.02□□□□□ -0.33
SMN1-202ENST00000380707 TMEM196Q5HYL7 178 aa13.02□□□□□ -0.33
SMN1-202ENST00000380707 GRAMD4Q6IC98 578 aa13.02□□□□□ -0.33
SMN1-202ENST00000380707 ZNF852Q6ZMS4 543 aa13.02□□□□□ -0.33
SMN1-202ENST00000380707 EZH1Q92800 747 aaPredicted RBP13.02□□□□□ -0.33
SMN1-202ENST00000380707 MSANTD3Q96H12 275 aa13.02□□□□□ -0.33
SMN1-202ENST00000380707 COL25A1Q9BXS0 654 aaPredicted RBP13.02□□□□□ -0.33
SMN1-202ENST00000380707 RETREG1Q9H6L5 497 aa13.02□□□□□ -0.33
SMN1-202ENST00000380707 CATSPERBQ9H7T0 1116 aa13.02□□□□□ -0.33
SMN1-202ENST00000380707 ARHGEF4Q9NR80 690 aa13.02□□□□□ -0.33
SMN1-202ENST00000380707 ETNK2Q9NVF9 386 aa13.02□□□□□ -0.33
SMN1-202ENST00000380707 RCOR3Q9P2K3 495 aaPredicted RBP13.02□□□□□ -0.33
SMN1-202ENST00000380707 DNAI1Q9UI46 699 aa13.02□□□□□ -0.33
SMN1-202ENST00000380707 SLC27A6Q9Y2P4 619 aa13.02□□□□□ -0.33
SMN1-202ENST00000380707 MFHAS1Q9Y4C4 1052 aa13.02□□□□□ -0.33
SMN1-202ENST00000380707 CUL9Q8IWT3 2517 aa13.02□□□□□ -0.33
SMN1-202ENST00000380707 A0A0A0MRY4 1105 aa13.01□□□□□ -0.33
SMN1-202ENST00000380707 ANTXRLA6NF34 631 aa13.01□□□□□ -0.33
SMN1-202ENST00000380707 WASH4PA8MWX3 477 aa13.01□□□□□ -0.33
SMN1-202ENST00000380707 MIF4GDA9UHW6 222 aaKnown RBP13.01□□□□□ -0.33
SMN1-202ENST00000380707 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.01□□□□□ -0.33
SMN1-202ENST00000380707 PRRT4C9JH25 899 aa13.01□□□□□ -0.33
SMN1-202ENST00000380707 DDX3YO15523 660 aaKnown RBP13.01□□□□□ -0.33
SMN1-202ENST00000380707 ZRANB2O95218 330 aaKnown RBP eCLIP13.01□□□□□ -0.33
SMN1-202ENST00000380707 KAT7O95251 611 aa13.01□□□□□ -0.33
SMN1-202ENST00000380707 MZF1P28698 734 aaPredicted RBP13.01□□□□□ -0.33
SMN1-202ENST00000380707 GRIA2P42262 883 aa13.01□□□□□ -0.33
SMN1-202ENST00000380707 NUMBP49757 651 aa13.01□□□□□ -0.33
SMN1-202ENST00000380707 DNA2P51530 1060 aa13.01□□□□□ -0.33
SMN1-202ENST00000380707 RWDD2BP57060 319 aa13.01□□□□□ -0.33
SMN1-202ENST00000380707 GEN1Q17RS7 908 aa13.01□□□□□ -0.33
SMN1-202ENST00000380707 ODF2Q5BJF6 829 aa13.01□□□□□ -0.33
SMN1-202ENST00000380707 ZNF569Q5MCW4 686 aa13.01□□□□□ -0.33
SMN1-202ENST00000380707 TMEM215Q68D42 235 aa13.01□□□□□ -0.33
SMN1-202ENST00000380707 FSTL4Q6MZW2 842 aa13.01□□□□□ -0.33
SMN1-202ENST00000380707 C1orf228Q6PIY5 440 aa13.01□□□□□ -0.33
SMN1-202ENST00000380707 MFSD7Q6UXD7 560 aa13.01□□□□□ -0.33
SMN1-202ENST00000380707 TRIM67Q6ZTA4 783 aa13.01□□□□□ -0.33
SMN1-202ENST00000380707 KIAA0907Q7Z7F0 614 aaPredicted RBP13.01□□□□□ -0.33
SMN1-202ENST00000380707 SETD3Q86TU7 594 aaPredicted RBP13.01□□□□□ -0.33
SMN1-202ENST00000380707 CCDC117Q8IWD4 279 aaPredicted RBP13.01□□□□□ -0.33
SMN1-202ENST00000380707 RCOR2Q8IZ40 523 aa13.01□□□□□ -0.33
SMN1-202ENST00000380707 ZNF687Q8N1G0 1237 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms