RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 CCDC185Q8N715 623 aa12.78□□□□□ -0.36
PRPF40B-202ENST00000380281 C18orf25Q96B23 403 aaPredicted RBP12.78□□□□□ -0.36
PRPF40B-202ENST00000380281 PPP1R14BQ96C90 147 aa12.78□□□□□ -0.36
PRPF40B-202ENST00000380281 EPB41L1Q9H4G0 881 aa12.78□□□□□ -0.36
PRPF40B-202ENST00000380281 TMEM134Q9H6X4 195 aa12.78□□□□□ -0.36
PRPF40B-202ENST00000380281 GOLGA2P5Q9HBQ8 144 aa12.78□□□□□ -0.36
PRPF40B-202ENST00000380281 PCDHGC3Q9UN70 934 aa12.78□□□□□ -0.36
PRPF40B-202ENST00000380281 E7ESA3 106 aa12.77□□□□□ -0.36
PRPF40B-202ENST00000380281 GSTT2P0CG29 244 aa12.77□□□□□ -0.36
PRPF40B-202ENST00000380281 GSTT2BP0CG30 244 aa12.77□□□□□ -0.36
PRPF40B-202ENST00000380281 AKAP5P24588 427 aa12.77□□□□□ -0.36
PRPF40B-202ENST00000380281 TARBP2Q15633 366 aaKnown RBP12.77□□□□□ -0.36
PRPF40B-202ENST00000380281 SLC10A6Q3KNW5 377 aa12.77□□□□□ -0.36
PRPF40B-202ENST00000380281 TMCO4Q5TGY1 634 aa12.77□□□□□ -0.36
PRPF40B-202ENST00000380281 NXNQ6DKJ4 435 aa12.77□□□□□ -0.36
PRPF40B-202ENST00000380281 TTC30AQ86WT1 665 aa12.77□□□□□ -0.36
PRPF40B-202ENST00000380281 DEFB107AQ8IZN7 70 aa12.77□□□□□ -0.36
PRPF40B-202ENST00000380281 TTC16Q8NEE8 873 aa12.77□□□□□ -0.36
PRPF40B-202ENST00000380281 ZDHHC7Q9NXF8 308 aa12.77□□□□□ -0.36
PRPF40B-202ENST00000380281 APOBEC2Q9Y235 224 aaKnown RBP12.77□□□□□ -0.36
PRPF40B-202ENST00000380281 PAPSS1O43252 624 aaPredicted RBP12.77□□□□□ -0.37
PRPF40B-202ENST00000380281 STRNO43815 780 aa12.77□□□□□ -0.37
PRPF40B-202ENST00000380281 ARF4P18085 180 aaPredicted RBP12.77□□□□□ -0.37
PRPF40B-202ENST00000380281 ZNF618Q5T7W0 954 aa12.77□□□□□ -0.37
PRPF40B-202ENST00000380281 WDR75Q8IWA0 830 aaKnown RBP12.77□□□□□ -0.37
PRPF40B-202ENST00000380281 DNAAF3Q8N9W5 541 aa12.77□□□□□ -0.37
PRPF40B-202ENST00000380281 PPP4R1Q8TF05 950 aa12.77□□□□□ -0.37
PRPF40B-202ENST00000380281 DHRS4Q9BTZ2 278 aa12.77□□□□□ -0.37
PRPF40B-202ENST00000380281 NIFKQ9BYG3 293 aaKnown RBP12.77□□□□□ -0.37
PRPF40B-202ENST00000380281 DPP3Q9NY33 737 aa12.77□□□□□ -0.37
PRPF40B-202ENST00000380281 HESX1Q9UBX0 185 aa12.77□□□□□ -0.37
PRPF40B-202ENST00000380281 SUN2Q9UH99 717 aa12.77□□□□□ -0.37
PRPF40B-202ENST00000380281 NUP205Q92621 2012 aa12.77□□□□□ -0.37
PRPF40B-202ENST00000380281 BTBD19C9JJ37 291 aa12.77□□□□□ -0.37
PRPF40B-202ENST00000380281 FBP2O00757 339 aa12.77□□□□□ -0.37
PRPF40B-202ENST00000380281 ADCY6O43306 1168 aa12.77□□□□□ -0.37
PRPF40B-202ENST00000380281 SERPINB7O75635 380 aa12.77□□□□□ -0.37
PRPF40B-202ENST00000380281 PIGRP01833 764 aa12.77□□□□□ -0.37
PRPF40B-202ENST00000380281 RAG1P15918 1043 aa12.77□□□□□ -0.37
PRPF40B-202ENST00000380281 ACAT1P24752 427 aaKnown RBP12.77□□□□□ -0.37
PRPF40B-202ENST00000380281 AVPR1AP37288 418 aa12.77□□□□□ -0.37
PRPF40B-202ENST00000380281 PDE1CQ14123 709 aaPredicted RBP12.77□□□□□ -0.37
PRPF40B-202ENST00000380281 MXD4Q14582 209 aaPredicted RBP12.77□□□□□ -0.37
PRPF40B-202ENST00000380281 DALRD3Q5D0E6 543 aaKnown RBP12.77□□□□□ -0.37
PRPF40B-202ENST00000380281 METTL7BQ6UX53 244 aa12.77□□□□□ -0.37
PRPF40B-202ENST00000380281 ATG14Q6ZNE5 492 aa12.77□□□□□ -0.37
PRPF40B-202ENST00000380281 PTAR1Q7Z6K3 402 aaPredicted RBP12.77□□□□□ -0.37
PRPF40B-202ENST00000380281 PHTF2Q8N3S3 785 aa12.77□□□□□ -0.37
PRPF40B-202ENST00000380281 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.77□□□□□ -0.37
PRPF40B-202ENST00000380281 NIPA2Q8N8Q9 360 aa12.77□□□□□ -0.37
PRPF40B-202ENST00000380281 SNX31Q8N9S9 440 aa12.77□□□□□ -0.37
PRPF40B-202ENST00000380281 IRGQQ8WZA9 623 aa12.77□□□□□ -0.37
PRPF40B-202ENST00000380281 NT5C1AQ9BXI3 368 aa12.77□□□□□ -0.37
PRPF40B-202ENST00000380281 WDR55Q9H6Y2 383 aaPredicted RBP12.77□□□□□ -0.37
PRPF40B-202ENST00000380281 TAGLN3Q9UI15 199 aa12.77□□□□□ -0.37
PRPF40B-202ENST00000380281 DMTF1Q9Y222 760 aa12.77□□□□□ -0.37
PRPF40B-202ENST00000380281 CLEC11AQ9Y240 323 aa12.77□□□□□ -0.37
PRPF40B-202ENST00000380281 HBS1LQ9Y450 684 aaKnown RBP12.77□□□□□ -0.37
PRPF40B-202ENST00000380281 THSD7AQ9UPZ6 1657 aa12.77□□□□□ -0.37
PRPF40B-202ENST00000380281 ANKRD12Q6UB98 2062 aa12.76□□□□□ -0.37
PRPF40B-202ENST00000380281 SLC1A6P48664 564 aa12.76□□□□□ -0.37
PRPF40B-202ENST00000380281 RELAQ04206 551 aa12.76□□□□□ -0.37
PRPF40B-202ENST00000380281 SLC18A2Q05940 514 aa12.76□□□□□ -0.37
PRPF40B-202ENST00000380281 HIC1Q14526 733 aa12.76□□□□□ -0.37
PRPF40B-202ENST00000380281 HSP90AA5PQ58FG0 334 aa12.76□□□□□ -0.37
PRPF40B-202ENST00000380281 EFHC1Q5JVL4 640 aa12.76□□□□□ -0.37
PRPF40B-202ENST00000380281 C6orf183Q5T699 404 aa12.76□□□□□ -0.37
PRPF40B-202ENST00000380281 CYP4V2Q6ZWL3 525 aaPredicted RBP12.76□□□□□ -0.37
PRPF40B-202ENST00000380281 PID1Q7Z2X4 250 aa12.76□□□□□ -0.37
PRPF40B-202ENST00000380281 AMIGO2Q86SJ2 522 aa12.76□□□□□ -0.37
PRPF40B-202ENST00000380281 DQX1Q8TE96 717 aaKnown RBP12.76□□□□□ -0.37
PRPF40B-202ENST00000380281 USP13Q92995 863 aaPredicted RBP12.76□□□□□ -0.37
PRPF40B-202ENST00000380281 SGF29Q96ES7 293 aa12.76□□□□□ -0.37
PRPF40B-202ENST00000380281 NRDE2Q9H7Z3 1164 aa12.76□□□□□ -0.37
PRPF40B-202ENST00000380281 TMEM216Q9P0N5 145 aa12.76□□□□□ -0.37
PRPF40B-202ENST00000380281 TSC22D4Q9Y3Q8 395 aa12.76□□□□□ -0.37
PRPF40B-202ENST00000380281 A0A088AWK7 358 aa12.76□□□□□ -0.37
PRPF40B-202ENST00000380281 FKBP6O75344 327 aa12.76□□□□□ -0.37
PRPF40B-202ENST00000380281 AMHP03971 560 aa12.76□□□□□ -0.37
PRPF40B-202ENST00000380281 DHRS4L1P0CG22 281 aa12.76□□□□□ -0.37
PRPF40B-202ENST00000380281 HDAC4P56524 1084 aa12.76□□□□□ -0.37
PRPF40B-202ENST00000380281 IFRD2Q12894 506 aaPredicted RBP12.76□□□□□ -0.37
PRPF40B-202ENST00000380281 ITGA7Q13683 1181 aa12.76□□□□□ -0.37
PRPF40B-202ENST00000380281 DCAF6Q58WW2 860 aa12.76□□□□□ -0.37
PRPF40B-202ENST00000380281 BBS5Q8N3I7 341 aa12.76□□□□□ -0.37
PRPF40B-202ENST00000380281 COLGALT1Q8NBJ5 622 aa12.76□□□□□ -0.37
PRPF40B-202ENST00000380281 RNF169Q8NCN4 708 aa12.76□□□□□ -0.37
PRPF40B-202ENST00000380281 USP33Q8TEY7 942 aa12.76□□□□□ -0.37
PRPF40B-202ENST00000380281 RSPH1Q8WYR4 309 aa12.76□□□□□ -0.37
PRPF40B-202ENST00000380281 TMIGD2Q96BF3 282 aa12.76□□□□□ -0.37
PRPF40B-202ENST00000380281 MCRS1Q96EZ8 462 aa12.76□□□□□ -0.37
PRPF40B-202ENST00000380281 GPR20Q99678 358 aa12.76□□□□□ -0.37
PRPF40B-202ENST00000380281 SPATC1LQ9H0A9 340 aa12.76□□□□□ -0.37
PRPF40B-202ENST00000380281 SNTG2Q9NY99 539 aa12.76□□□□□ -0.37
PRPF40B-202ENST00000380281 AP4E1Q9UPM8 1137 aa12.76□□□□□ -0.37
PRPF40B-202ENST00000380281 CAPN14A8MX76 684 aa12.75□□□□□ -0.37
PRPF40B-202ENST00000380281 NFKBIEO00221 500 aa12.75□□□□□ -0.37
PRPF40B-202ENST00000380281 BPGMP07738 259 aa12.75□□□□□ -0.37
PRPF40B-202ENST00000380281 LMO2P25791 158 aa12.75□□□□□ -0.37
PRPF40B-202ENST00000380281 VGLL4Q14135 290 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms