RNA–Protein interactions for RNA: ENST00000379698.8

SH3KBP1-202, Transcript of SH3 domain containing kinase binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene SH3KBP1, Length 2,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1-202ENST00000379698 MID2Q9UJV3 735 aa13.36□□□□□ -0.27
SH3KBP1-202ENST00000379698 TBC1D30Q9Y2I9 924 aa13.36□□□□□ -0.27
SH3KBP1-202ENST00000379698 SLC4A7Q9Y6M7 1214 aa13.36□□□□□ -0.27
SH3KBP1-202ENST00000379698 LOC100653049A0A140TA62 436 aa13.36□□□□□ -0.27
SH3KBP1-202ENST00000379698 ASB14A6NK59 587 aa13.36□□□□□ -0.27
SH3KBP1-202ENST00000379698 KRT34O76011 436 aa13.36□□□□□ -0.27
SH3KBP1-202ENST00000379698 KLF10Q13118 480 aa13.36□□□□□ -0.27
SH3KBP1-202ENST00000379698 PAFAH1B3Q15102 231 aaKnown RBP13.36□□□□□ -0.27
SH3KBP1-202ENST00000379698 LPCAT4Q643R3 524 aa13.36□□□□□ -0.27
SH3KBP1-202ENST00000379698 KBTBD6Q86V97 674 aa13.36□□□□□ -0.27
SH3KBP1-202ENST00000379698 ZNF410Q86VK4 478 aa13.36□□□□□ -0.27
SH3KBP1-202ENST00000379698 HPS6Q86YV9 775 aa13.36□□□□□ -0.27
SH3KBP1-202ENST00000379698 PHTF2Q8N3S3 785 aa13.36□□□□□ -0.27
SH3KBP1-202ENST00000379698 NCSTNQ92542 709 aa13.36□□□□□ -0.27
SH3KBP1-202ENST00000379698 SNX27Q96L92 541 aa13.36□□□□□ -0.27
SH3KBP1-202ENST00000379698 ZMAT2Q96NC0 199 aaKnown RBP13.36□□□□□ -0.27
SH3KBP1-202ENST00000379698 BTBD9Q96Q07 612 aa13.36□□□□□ -0.27
SH3KBP1-202ENST00000379698 SPATA16Q9BXB7 569 aa13.36□□□□□ -0.27
SH3KBP1-202ENST00000379698 SHCBP1LQ9BZQ2 653 aa13.36□□□□□ -0.27
SH3KBP1-202ENST00000379698 DMAP1Q9NPF5 467 aaPredicted RBP13.36□□□□□ -0.27
SH3KBP1-202ENST00000379698 GPRC5DQ9NZD1 345 aa13.36□□□□□ -0.27
SH3KBP1-202ENST00000379698 MYCNP04198 464 aaPredicted RBP13.35□□□□□ -0.27
SH3KBP1-202ENST00000379698 RAG1P15918 1043 aa13.35□□□□□ -0.27
SH3KBP1-202ENST00000379698 VCLP18206 1134 aa13.35□□□□□ -0.27
SH3KBP1-202ENST00000379698 GSTT1P30711 240 aa13.35□□□□□ -0.27
SH3KBP1-202ENST00000379698 MSLNQ13421 630 aaPredicted RBP13.35□□□□□ -0.27
SH3KBP1-202ENST00000379698 GRM2Q14416 872 aa13.35□□□□□ -0.27
SH3KBP1-202ENST00000379698 LRRC36Q1X8D7 754 aa13.35□□□□□ -0.27
SH3KBP1-202ENST00000379698 STRA8Q7Z7C7 330 aa13.35□□□□□ -0.27
SH3KBP1-202ENST00000379698 CMC1Q7Z7K0 106 aa13.35□□□□□ -0.27
SH3KBP1-202ENST00000379698 DEFB106AQ8N104 65 aa13.35□□□□□ -0.27
SH3KBP1-202ENST00000379698 NME8Q8N427 588 aa13.35□□□□□ -0.27
SH3KBP1-202ENST00000379698 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.35□□□□□ -0.27
SH3KBP1-202ENST00000379698 LPIN3Q9BQK8 851 aa13.35□□□□□ -0.27
SH3KBP1-202ENST00000379698 PRDM12Q9H4Q4 367 aa13.35□□□□□ -0.27
SH3KBP1-202ENST00000379698 SNTG2Q9NY99 539 aa13.35□□□□□ -0.27
SH3KBP1-202ENST00000379698 BFARQ9NZS9 450 aa13.35□□□□□ -0.27
SH3KBP1-202ENST00000379698 TUBGCP4Q9UGJ1 667 aa13.35□□□□□ -0.27
SH3KBP1-202ENST00000379698 PRPF19Q9UMS4 504 aaKnown RBP13.35□□□□□ -0.27
SH3KBP1-202ENST00000379698 CITO14578 2027 aa13.35□□□□□ -0.27
SH3KBP1-202ENST00000379698 ADCY6O43306 1168 aa13.35□□□□□ -0.27
SH3KBP1-202ENST00000379698 TRIM13O60858 407 aa13.35□□□□□ -0.27
SH3KBP1-202ENST00000379698 PEX2P28328 305 aa13.35□□□□□ -0.27
SH3KBP1-202ENST00000379698 NUMBP49757 651 aa13.35□□□□□ -0.27
SH3KBP1-202ENST00000379698 SH3BGRP55822 239 aaPredicted RBP13.35□□□□□ -0.27
SH3KBP1-202ENST00000379698 TRIP10Q15642 601 aa13.35□□□□□ -0.27
SH3KBP1-202ENST00000379698 CNPY1Q3B7I2 92 aa13.35□□□□□ -0.27
SH3KBP1-202ENST00000379698 CES3Q6UWW8 571 aa13.35□□□□□ -0.27
SH3KBP1-202ENST00000379698 PID1Q7Z2X4 250 aa13.35□□□□□ -0.27
SH3KBP1-202ENST00000379698 TMEM135Q86UB9 458 aa13.35□□□□□ -0.27
SH3KBP1-202ENST00000379698 ZNF781Q8N8C0 355 aa13.35□□□□□ -0.27
SH3KBP1-202ENST00000379698 ZNF669Q96BR6 464 aaPredicted RBP13.35□□□□□ -0.27
SH3KBP1-202ENST00000379698 FCRL3Q96P31 734 aaPredicted RBP13.35□□□□□ -0.27
SH3KBP1-202ENST00000379698 CEP41Q9BYV8 373 aa13.35□□□□□ -0.27
SH3KBP1-202ENST00000379698 MROH8Q9H579 483 aa13.35□□□□□ -0.27
SH3KBP1-202ENST00000379698 TXNRD2Q9NNW7 524 aa13.35□□□□□ -0.27
SH3KBP1-202ENST00000379698 VCX3AQ9NNX9 186 aa13.35□□□□□ -0.27
SH3KBP1-202ENST00000379698 ZNF358Q9NW07 568 aa13.35□□□□□ -0.27
SH3KBP1-202ENST00000379698 RBPJLQ9UBG7 517 aa13.35□□□□□ -0.27
SH3KBP1-202ENST00000379698 A0A096LPK6 155 aa13.34□□□□□ -0.27
SH3KBP1-202ENST00000379698 G3V2L1 256 aa13.34□□□□□ -0.27
SH3KBP1-202ENST00000379698 TIMM44O43615 452 aa13.34□□□□□ -0.27
SH3KBP1-202ENST00000379698 ZBTB14O43829 449 aa13.34□□□□□ -0.27
SH3KBP1-202ENST00000379698 DAB1O75553 588 aa13.34□□□□□ -0.27
SH3KBP1-202ENST00000379698 SORBS2O94875 1100 aaKnown RBP13.34□□□□□ -0.27
SH3KBP1-202ENST00000379698 THRAP10827 490 aa13.34□□□□□ -0.27
SH3KBP1-202ENST00000379698 GNL1P36915 607 aaPredicted RBP13.34□□□□□ -0.27
SH3KBP1-202ENST00000379698 HK2P52789 917 aa13.34□□□□□ -0.27
SH3KBP1-202ENST00000379698 AQP4P55087 323 aa13.34□□□□□ -0.27
SH3KBP1-202ENST00000379698 USP4Q13107 963 aa13.34□□□□□ -0.27
SH3KBP1-202ENST00000379698 Q3C1V9 767 aa13.34□□□□□ -0.27
SH3KBP1-202ENST00000379698 MMEL1Q495T6 779 aa13.34□□□□□ -0.27
SH3KBP1-202ENST00000379698 TCHHL1Q5QJ38 904 aaPredicted RBP13.34□□□□□ -0.27
SH3KBP1-202ENST00000379698 C9orf57Q5W0N0 161 aa13.34□□□□□ -0.27
SH3KBP1-202ENST00000379698 FSTL4Q6MZW2 842 aa13.34□□□□□ -0.27
SH3KBP1-202ENST00000379698 PDZD4Q76G19 769 aaPredicted RBP13.34□□□□□ -0.27
SH3KBP1-202ENST00000379698 CLEC14AQ86T13 490 aa13.34□□□□□ -0.27
SH3KBP1-202ENST00000379698 TNS4Q8IZW8 715 aa13.34□□□□□ -0.27
SH3KBP1-202ENST00000379698 SERPINI1Q99574 410 aa13.34□□□□□ -0.27
SH3KBP1-202ENST00000379698 C6orf203Q9P0P8 240 aaPredicted RBP13.34□□□□□ -0.27
SH3KBP1-202ENST00000379698 AP2A1O95782 977 aa13.34□□□□□ -0.27
SH3KBP1-202ENST00000379698 APOA4P06727 396 aa13.34□□□□□ -0.27
SH3KBP1-202ENST00000379698 PDGFRBP09619 1106 aa13.34□□□□□ -0.27
SH3KBP1-202ENST00000379698 GLDCP23378 1020 aa13.34□□□□□ -0.27
SH3KBP1-202ENST00000379698 NOS2P35228 1153 aa13.34□□□□□ -0.27
SH3KBP1-202ENST00000379698 ANKRD20A4Q4UJ75 823 aa13.34□□□□□ -0.27
SH3KBP1-202ENST00000379698 SLC27A1Q6PCB7 646 aa13.34□□□□□ -0.27
SH3KBP1-202ENST00000379698 PLD6Q8N2A8 252 aaKnown RBP13.34□□□□□ -0.27
SH3KBP1-202ENST00000379698 TDRD5Q8NAT2 981 aaKnown RBP13.34□□□□□ -0.27
SH3KBP1-202ENST00000379698 ICA1LQ8NDH6 482 aa13.34□□□□□ -0.27
SH3KBP1-202ENST00000379698 OR52K1Q8NGK4 314 aa13.34□□□□□ -0.27
SH3KBP1-202ENST00000379698 KBTBD7Q8WVZ9 684 aa13.34□□□□□ -0.27
SH3KBP1-202ENST00000379698 FAM149B1Q96BN6 582 aa13.34□□□□□ -0.27
SH3KBP1-202ENST00000379698 CXCL16Q9H2A7 254 aa13.34□□□□□ -0.27
SH3KBP1-202ENST00000379698 SNX25Q9H3E2 840 aa13.34□□□□□ -0.27
SH3KBP1-202ENST00000379698 TCF7L2Q9NQB0 619 aa13.34□□□□□ -0.27
SH3KBP1-202ENST00000379698 KLHL8Q9P2G9 620 aaPredicted RBP13.34□□□□□ -0.27
SH3KBP1-202ENST00000379698 STK39Q9UEW8 545 aa13.34□□□□□ -0.27
SH3KBP1-202ENST00000379698 VANGL2Q9ULK5 521 aa13.34□□□□□ -0.27
SH3KBP1-202ENST00000379698 RAD54BQ9Y620 910 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms