RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 SAMD4BQ5PRF9 694 aaKnown RBP11.44□□□□□ -0.58
PTCHD1-201ENST00000379361 OR56A4Q8NGH8 313 aa11.44□□□□□ -0.58
PTCHD1-201ENST00000379361 MCUBQ9NWR8 336 aa11.44□□□□□ -0.58
PTCHD1-201ENST00000379361 EPORP19235 508 aa11.44□□□□□ -0.58
PTCHD1-201ENST00000379361 MZT2BQ6NZ67 158 aa11.44□□□□□ -0.58
PTCHD1-201ENST00000379361 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.44□□□□□ -0.58
PTCHD1-201ENST00000379361 TMEM120BA0PK00 339 aa11.44□□□□□ -0.58
PTCHD1-201ENST00000379361 DNAJB2P25686 324 aa11.44□□□□□ -0.58
PTCHD1-201ENST00000379361 CHN2P52757 468 aa11.44□□□□□ -0.58
PTCHD1-201ENST00000379361 PUS10Q3MIT2 529 aaKnown RBP11.44□□□□□ -0.58
PTCHD1-201ENST00000379361 FBXL19Q6PCT2 694 aa11.44□□□□□ -0.58
PTCHD1-201ENST00000379361 PROSER1Q86XN7 944 aa11.44□□□□□ -0.58
PTCHD1-201ENST00000379361 ELOA2Q8IYF1 753 aaPredicted RBP11.44□□□□□ -0.58
PTCHD1-201ENST00000379361 GAS2L1Q99501 681 aaPredicted RBP11.44□□□□□ -0.58
PTCHD1-201ENST00000379361 CCNDBP1O95273 360 aa11.44□□□□□ -0.58
PTCHD1-201ENST00000379361 ARFIP1P53367 373 aa11.44□□□□□ -0.58
PTCHD1-201ENST00000379361 LYPLAL1Q5VWZ2 237 aa11.44□□□□□ -0.58
PTCHD1-201ENST00000379361 LRRC6Q86X45 466 aa11.44□□□□□ -0.58
PTCHD1-201ENST00000379361 WHRNQ9P202 907 aa11.44□□□□□ -0.58
PTCHD1-201ENST00000379361 FAM25EA8MYX2 175 aa11.44□□□□□ -0.58
PTCHD1-201ENST00000379361 FBXO38Q6PIJ6 1188 aa11.44□□□□□ -0.58
PTCHD1-201ENST00000379361 ZNF621Q6ZSS3 439 aa11.44□□□□□ -0.58
PTCHD1-201ENST00000379361 CLIP3Q96DZ5 547 aa11.44□□□□□ -0.58
PTCHD1-201ENST00000379361 CYLDQ9NQC7 956 aa11.44□□□□□ -0.58
PTCHD1-201ENST00000379361 TRIP12Q14669 1992 aaPredicted RBP11.43□□□□□ -0.58
PTCHD1-201ENST00000379361 OMPP47874 163 aa11.43□□□□□ -0.58
PTCHD1-201ENST00000379361 ZNF605Q86T29 641 aa11.43□□□□□ -0.58
PTCHD1-201ENST00000379361 MCRS1Q96EZ8 462 aa11.43□□□□□ -0.58
PTCHD1-201ENST00000379361 ZNHIT2Q9UHR6 403 aa11.43□□□□□ -0.58
PTCHD1-201ENST00000379361 FARP2O94887 1054 aaPredicted RBP11.43□□□□□ -0.58
PTCHD1-201ENST00000379361 DEFB128Q7Z7B8 93 aa11.43□□□□□ -0.58
PTCHD1-201ENST00000379361 REEP1Q9H902 201 aa11.43□□□□□ -0.58
PTCHD1-201ENST00000379361 INTS10Q9NVR2 710 aaKnown RBP11.43□□□□□ -0.58
PTCHD1-201ENST00000379361 FAUP35544 74 aaKnown RBP11.43□□□□□ -0.58
PTCHD1-201ENST00000379361 GPSM1Q86YR5 675 aa11.43□□□□□ -0.58
PTCHD1-201ENST00000379361 RPTORQ8N122 1335 aa11.43□□□□□ -0.58
PTCHD1-201ENST00000379361 DDX3XO00571 662 aaKnown RBP eCLIP11.43□□□□□ -0.58
PTCHD1-201ENST00000379361 ITGA8P53708 1063 aa11.43□□□□□ -0.58
PTCHD1-201ENST00000379361 NAA20P61599 178 aa11.43□□□□□ -0.58
PTCHD1-201ENST00000379361 RBM43Q6ZSC3 357 aaKnown RBP11.43□□□□□ -0.58
PTCHD1-201ENST00000379361 STRA8Q7Z7C7 330 aa11.43□□□□□ -0.58
PTCHD1-201ENST00000379361 TRIM17Q9Y577 477 aa11.43□□□□□ -0.58
PTCHD1-201ENST00000379361 NCK2O43639 380 aa11.43□□□□□ -0.58
PTCHD1-201ENST00000379361 TCEAL6Q6IPX3 200 aa11.43□□□□□ -0.58
PTCHD1-201ENST00000379361 SGCDQ92629 289 aa11.43□□□□□ -0.58
PTCHD1-201ENST00000379361 LOC100653049A0A140TA62 436 aa11.43□□□□□ -0.58
PTCHD1-201ENST00000379361 RPP38P78345 283 aaKnown RBP11.43□□□□□ -0.58
PTCHD1-201ENST00000379361 SEC16BQ96JE7 1060 aa11.43□□□□□ -0.58
PTCHD1-201ENST00000379361 AIFM3Q96NN9 605 aa11.43□□□□□ -0.58
PTCHD1-201ENST00000379361 MKNK1Q9BUB5 465 aa11.43□□□□□ -0.58
PTCHD1-201ENST00000379361 FICDQ9BVA6 458 aa11.43□□□□□ -0.58
PTCHD1-201ENST00000379361 CCSER1Q9C0I3 900 aa11.43□□□□□ -0.58
PTCHD1-201ENST00000379361 MIR1-1HGQ9H1L0 117 aa11.43□□□□□ -0.58
PTCHD1-201ENST00000379361 TAS2R13Q9NYV9 303 aa11.43□□□□□ -0.58
PTCHD1-201ENST00000379361 GGT7Q9UJ14 662 aa11.43□□□□□ -0.58
PTCHD1-201ENST00000379361 SSU72P8A0A1W2PR75 194 aa11.43□□□□□ -0.58
PTCHD1-201ENST00000379361 BTG3Q14201 252 aaPredicted RBP11.43□□□□□ -0.58
PTCHD1-201ENST00000379361 EIF3MQ7L2H7 374 aaKnown RBP11.43□□□□□ -0.58
PTCHD1-201ENST00000379361 SAMD3Q8N6K7 520 aa11.43□□□□□ -0.58
PTCHD1-201ENST00000379361 MS4A14Q96JA4 679 aa11.43□□□□□ -0.58
PTCHD1-201ENST00000379361 FAM192AQ9GZU8 254 aa11.43□□□□□ -0.58
PTCHD1-201ENST00000379361 EIF3HO15372 352 aaKnown RBP eCLIP11.43□□□□□ -0.58
PTCHD1-201ENST00000379361 TMCC2O75069 709 aa11.43□□□□□ -0.58
PTCHD1-201ENST00000379361 CLPTM1O96005 669 aa11.43□□□□□ -0.58
PTCHD1-201ENST00000379361 SLC4A11Q8NBS3 891 aa11.43□□□□□ -0.58
PTCHD1-201ENST00000379361 TBL1YQ9BQ87 522 aa11.43□□□□□ -0.58
PTCHD1-201ENST00000379361 RPA3P35244 121 aaPredicted RBP11.43□□□□□ -0.58
PTCHD1-201ENST00000379361 MTTPP55157 894 aa11.43□□□□□ -0.58
PTCHD1-201ENST00000379361 PLEKHH3Q7Z736 793 aa11.43□□□□□ -0.58
PTCHD1-201ENST00000379361 SLC44A5Q8NCS7 719 aa11.43□□□□□ -0.58
PTCHD1-201ENST00000379361 CXorf40AQ8TE69 158 aa11.43□□□□□ -0.58
PTCHD1-201ENST00000379361 CBWD1Q9BRT8 395 aa11.43□□□□□ -0.58
PTCHD1-201ENST00000379361 MYL9P24844 172 aa11.43□□□□□ -0.58
PTCHD1-201ENST00000379361 C4orf33Q8N1A6 199 aa11.43□□□□□ -0.58
PTCHD1-201ENST00000379361 FANCFQ9NPI8 374 aa11.43□□□□□ -0.58
PTCHD1-201ENST00000379361 TBC1D3BA6NDS4 549 aa11.43□□□□□ -0.58
PTCHD1-201ENST00000379361 KCNH1O95259 989 aa11.43□□□□□ -0.58
PTCHD1-201ENST00000379361 ARF4P18085 180 aaPredicted RBP11.43□□□□□ -0.58
PTCHD1-201ENST00000379361 ZNF543Q08ER8 600 aa11.43□□□□□ -0.58
PTCHD1-201ENST00000379361 CSHL1Q14406 222 aa11.43□□□□□ -0.58
PTCHD1-201ENST00000379361 MFSD7Q6UXD7 560 aa11.43□□□□□ -0.58
PTCHD1-201ENST00000379361 METTL3Q86U44 580 aaKnown RBP11.43□□□□□ -0.58
PTCHD1-201ENST00000379361 JAZF1Q86VZ6 243 aa11.43□□□□□ -0.58
PTCHD1-201ENST00000379361 CCDC33Q8N5R6 958 aa11.43□□□□□ -0.58
PTCHD1-201ENST00000379361 MAGEE2Q8TD90 523 aaPredicted RBP11.43□□□□□ -0.58
PTCHD1-201ENST00000379361 ACTRT2Q8TDY3 377 aa11.43□□□□□ -0.58
PTCHD1-201ENST00000379361 KBTBD7Q8WVZ9 684 aa11.43□□□□□ -0.58
PTCHD1-201ENST00000379361 NUP153P49790 1475 aaKnown RBP11.43□□□□□ -0.58
PTCHD1-201ENST00000379361 RAMP2O60895 175 aa11.42□□□□□ -0.58
PTCHD1-201ENST00000379361 RECQL5O94762 991 aaPredicted RBP11.42□□□□□ -0.58
PTCHD1-201ENST00000379361 CALB2P22676 271 aa11.42□□□□□ -0.58
PTCHD1-201ENST00000379361 KELP23276 732 aa11.42□□□□□ -0.58
PTCHD1-201ENST00000379361 SRP54P61011 504 aaKnown RBP11.42□□□□□ -0.58
PTCHD1-201ENST00000379361 INSCQ1MX18 579 aa11.42□□□□□ -0.58
PTCHD1-201ENST00000379361 ACOX2Q99424 681 aa11.42□□□□□ -0.58
PTCHD1-201ENST00000379361 MROH8Q9H579 483 aa11.42□□□□□ -0.58
PTCHD1-201ENST00000379361 PPP2R3BQ9Y5P8 575 aa11.42□□□□□ -0.58
PTCHD1-201ENST00000379361 SSNA1O43805 119 aa11.42□□□□□ -0.58
PTCHD1-201ENST00000379361 SLC28A2O43868 658 aa11.42□□□□□ -0.58
PTCHD1-201ENST00000379361 PRKAR2AP13861 404 aaKnown RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms