RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 APPL1Q9UKG1 709 aa8.4□□□□□ -1.07
PTPRR-203ENST00000378778 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.39□□□□□ -1.07
PTPRR-203ENST00000378778 C2CD4BA6NLJ0 364 aa8.39□□□□□ -1.07
PTPRR-203ENST00000378778 TRPC5OSA6NMA1 111 aa8.39□□□□□ -1.07
PTPRR-203ENST00000378778 POLRMTO00411 1230 aaKnown RBP8.39□□□□□ -1.07
PTPRR-203ENST00000378778 ZBTB14O43829 449 aa8.39□□□□□ -1.07
PTPRR-203ENST00000378778 AVILO75366 819 aa8.39□□□□□ -1.07
PTPRR-203ENST00000378778 PIAS1O75925 651 aa8.39□□□□□ -1.07
PTPRR-203ENST00000378778 COL6A2P12110 1019 aa8.39□□□□□ -1.07
PTPRR-203ENST00000378778 DNAJB2P25686 324 aa8.39□□□□□ -1.07
PTPRR-203ENST00000378778 RBL1P28749 1068 aa8.39□□□□□ -1.07
PTPRR-203ENST00000378778 ASPAP45381 313 aa8.39□□□□□ -1.07
PTPRR-203ENST00000378778 THOP1P52888 689 aa8.39□□□□□ -1.07
PTPRR-203ENST00000378778 RHDQ02161 417 aa8.39□□□□□ -1.07
PTPRR-203ENST00000378778 ZBTB17Q13105 803 aa8.39□□□□□ -1.07
PTPRR-203ENST00000378778 STX5Q13190 355 aa8.39□□□□□ -1.07
PTPRR-203ENST00000378778 MGAT5BQ3V5L5 792 aa8.39□□□□□ -1.07
PTPRR-203ENST00000378778 KCNT1Q5JUK3 1230 aa8.39□□□□□ -1.07
PTPRR-203ENST00000378778 SEL1L3Q68CR1 1132 aa8.39□□□□□ -1.07
PTPRR-203ENST00000378778 KRT80Q6KB66 452 aa8.39□□□□□ -1.07
PTPRR-203ENST00000378778 PPP4R4Q6NUP7 873 aa8.39□□□□□ -1.07
PTPRR-203ENST00000378778 MAMDC4Q6UXC1 1216 aa8.39□□□□□ -1.07
PTPRR-203ENST00000378778 ABHD15Q6UXT9 468 aa8.39□□□□□ -1.07
PTPRR-203ENST00000378778 CLEC14AQ86T13 490 aa8.39□□□□□ -1.07
PTPRR-203ENST00000378778 SLC51AQ86UW1 340 aa8.39□□□□□ -1.07
PTPRR-203ENST00000378778 KIAA0319LQ8IZA0 1049 aa8.39□□□□□ -1.07
PTPRR-203ENST00000378778 PHTF2Q8N3S3 785 aa8.39□□□□□ -1.07
PTPRR-203ENST00000378778 TDRD5Q8NAT2 981 aaKnown RBP8.39□□□□□ -1.07
PTPRR-203ENST00000378778 MINDY2Q8NBR6 621 aa8.39□□□□□ -1.07
PTPRR-203ENST00000378778 BHLHE22Q8NFJ8 381 aaPredicted RBP8.39□□□□□ -1.07
PTPRR-203ENST00000378778 TFAP2BQ92481 460 aa8.39□□□□□ -1.07
PTPRR-203ENST00000378778 EME1Q96AY2 570 aa8.39□□□□□ -1.07
PTPRR-203ENST00000378778 ANKRD36BP1Q96IX9 119 aa8.39□□□□□ -1.07
PTPRR-203ENST00000378778 RANBP9Q96S59 729 aa8.39□□□□□ -1.07
PTPRR-203ENST00000378778 CDRT15Q96T59 188 aa8.39□□□□□ -1.07
PTPRR-203ENST00000378778 HNRNPABQ99729 332 aaKnown RBP8.39□□□□□ -1.07
PTPRR-203ENST00000378778 WDR41Q9HAD4 459 aa8.39□□□□□ -1.07
PTPRR-203ENST00000378778 SLC38A10Q9HBR0 1119 aa8.39□□□□□ -1.07
PTPRR-203ENST00000378778 SEPT9Q9UHD8 586 aaPredicted RBP8.39□□□□□ -1.07
PTPRR-203ENST00000378778 FADS3Q9Y5Q0 445 aa8.39□□□□□ -1.07
PTPRR-203ENST00000378778 SLC30A1Q9Y6M5 507 aa8.39□□□□□ -1.07
PTPRR-203ENST00000378778 FER1L6Q2WGJ9 1857 aa8.39□□□□□ -1.07
PTPRR-203ENST00000378778 PIK3R2O00459 728 aa8.39□□□□□ -1.07
PTPRR-203ENST00000378778 TIMM44O43615 452 aa8.39□□□□□ -1.07
PTPRR-203ENST00000378778 CABYRO75952 493 aa8.39□□□□□ -1.07
PTPRR-203ENST00000378778 PRKCGP05129 697 aa8.39□□□□□ -1.07
PTPRR-203ENST00000378778 POLBP06746 335 aa8.39□□□□□ -1.07
PTPRR-203ENST00000378778 ASNSP08243 561 aa8.39□□□□□ -1.07
PTPRR-203ENST00000378778 PCSK6P29122 969 aa8.39□□□□□ -1.07
PTPRR-203ENST00000378778 TYK2P29597 1187 aa8.39□□□□□ -1.07
PTPRR-203ENST00000378778 RPL14P50914 215 aaKnown RBP8.39□□□□□ -1.07
PTPRR-203ENST00000378778 MRPS22P82650 360 aaKnown RBP8.39□□□□□ -1.07
PTPRR-203ENST00000378778 PRKCEQ02156 737 aa8.39□□□□□ -1.07
PTPRR-203ENST00000378778 GRSF1Q12849 480 aaKnown RBP eCLIP8.39□□□□□ -1.07
PTPRR-203ENST00000378778 IKBKEQ14164 716 aa8.39□□□□□ -1.07
PTPRR-203ENST00000378778 TRIM25Q14258 630 aaKnown RBP8.39□□□□□ -1.07
PTPRR-203ENST00000378778 MOGQ16653 247 aa8.39□□□□□ -1.07
PTPRR-203ENST00000378778 C1QTNF12Q5T7M4 302 aa8.39□□□□□ -1.07
PTPRR-203ENST00000378778 INTS11Q5TA45 600 aaKnown RBP8.39□□□□□ -1.07
PTPRR-203ENST00000378778 ARHGEF16Q5VV41 709 aa8.39□□□□□ -1.07
PTPRR-203ENST00000378778 GRAMD4Q6IC98 578 aa8.39□□□□□ -1.07
PTPRR-203ENST00000378778 NIPAL1Q6NVV3 410 aa8.39□□□□□ -1.07
PTPRR-203ENST00000378778 DUS1LQ6P1R4 473 aaKnown RBP8.39□□□□□ -1.07
PTPRR-203ENST00000378778 IYDQ6PHW0 289 aa8.39□□□□□ -1.07
PTPRR-203ENST00000378778 CYP4V2Q6ZWL3 525 aaPredicted RBP8.39□□□□□ -1.07
PTPRR-203ENST00000378778 GPR180Q86V85 440 aa8.39□□□□□ -1.07
PTPRR-203ENST00000378778 SNX32Q86XE0 403 aa8.39□□□□□ -1.07
PTPRR-203ENST00000378778 PSTKQ8IV42 348 aaKnown RBP8.39□□□□□ -1.07
PTPRR-203ENST00000378778 PQLC3Q8N755 202 aa8.39□□□□□ -1.07
PTPRR-203ENST00000378778 DDHD1Q8NEL9 900 aa8.39□□□□□ -1.07
PTPRR-203ENST00000378778 RMDN3Q96TC7 470 aa8.39□□□□□ -1.07
PTPRR-203ENST00000378778 OLFM1Q99784 485 aa8.39□□□□□ -1.07
PTPRR-203ENST00000378778 PKP2Q99959 881 aa8.39□□□□□ -1.07
PTPRR-203ENST00000378778 MRPL4Q9BYD3 311 aaKnown RBP8.39□□□□□ -1.07
PTPRR-203ENST00000378778 UNKQ9C0B0 810 aaKnown RBP8.39□□□□□ -1.07
PTPRR-203ENST00000378778 COPS7BQ9H9Q2 264 aaPredicted RBP8.39□□□□□ -1.07
PTPRR-203ENST00000378778 ZBTB26Q9HCK0 441 aa8.39□□□□□ -1.07
PTPRR-203ENST00000378778 SCHIP1Q9P0W5 487 aaPredicted RBP8.39□□□□□ -1.07
PTPRR-203ENST00000378778 CDYLQ9Y232 598 aa8.39□□□□□ -1.07
PTPRR-203ENST00000378778 KIAA1217Q5T5P2 1943 aa8.38□□□□□ -1.07
PTPRR-203ENST00000378778 TCRBV3S1A0A5B6 114 aa8.38□□□□□ -1.07
PTPRR-203ENST00000378778 MAGEB16A2A368 324 aa8.38□□□□□ -1.07
PTPRR-203ENST00000378778 TMEM150BA6NC51 233 aa8.38□□□□□ -1.07
PTPRR-203ENST00000378778 IQCA1LA6NCM1 817 aa8.38□□□□□ -1.07
PTPRR-203ENST00000378778 NFIBO00712 420 aa8.38□□□□□ -1.07
PTPRR-203ENST00000378778 PAPSS1O43252 624 aaPredicted RBP8.38□□□□□ -1.07
PTPRR-203ENST00000378778 UGT1A9O60656 530 aa8.38□□□□□ -1.07
PTPRR-203ENST00000378778 ALDH2P05091 517 aa8.38□□□□□ -1.07
PTPRR-203ENST00000378778 SUPT20HL2P0C7V6 817 aa8.38□□□□□ -1.07
PTPRR-203ENST00000378778 HSPA8P11142 646 aaKnown RBP8.38□□□□□ -1.07
PTPRR-203ENST00000378778 CYP2C9P11712 490 aa8.38□□□□□ -1.07
PTPRR-203ENST00000378778 BMP2P12643 396 aa8.38□□□□□ -1.07
PTPRR-203ENST00000378778 KCNA2P16389 499 aa8.38□□□□□ -1.07
PTPRR-203ENST00000378778 XRCC1P18887 633 aaPredicted RBP8.38□□□□□ -1.07
PTPRR-203ENST00000378778 MLH1P40692 756 aa8.38□□□□□ -1.07
PTPRR-203ENST00000378778 OAZ1P54368 228 aa8.38□□□□□ -1.07
PTPRR-203ENST00000378778 WNT7BP56706 349 aa8.38□□□□□ -1.07
PTPRR-203ENST00000378778 KCNC4Q03721 635 aa8.38□□□□□ -1.07
PTPRR-203ENST00000378778 DOK7Q18PE1 504 aa8.38□□□□□ -1.07
PTPRR-203ENST00000378778 SUPT20HL1Q3ZLR7 823 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms