RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 GRK5P34947 590 aa8.9□□□□□ -0.99
LIG3-202ENST00000378526 ARFIP1P53367 373 aa8.9□□□□□ -0.99
LIG3-202ENST00000378526 MOGSQ13724 837 aa8.9□□□□□ -0.99
LIG3-202ENST00000378526 ZNF267Q14586 743 aaPredicted RBP8.9□□□□□ -0.99
LIG3-202ENST00000378526 LRRC41Q15345 812 aa8.9□□□□□ -0.99
LIG3-202ENST00000378526 RAB12Q6IQ22 244 aa8.9□□□□□ -0.99
LIG3-202ENST00000378526 QSOX2Q6ZRP7 698 aa8.9□□□□□ -0.99
LIG3-202ENST00000378526 CPXCR1Q8N123 301 aa8.9□□□□□ -0.99
LIG3-202ENST00000378526 ELMOD1Q8N336 334 aa8.9□□□□□ -0.99
LIG3-202ENST00000378526 NACC2Q96BF6 587 aa8.9□□□□□ -0.99
LIG3-202ENST00000378526 TCEAL4Q96EI5 215 aa8.9□□□□□ -0.99
LIG3-202ENST00000378526 C9orf72Q96LT7 481 aa8.9□□□□□ -0.99
LIG3-202ENST00000378526 MUC13Q9H3R2 512 aa8.9□□□□□ -0.99
LIG3-202ENST00000378526 PCDHA1Q9Y5I3 950 aa8.9□□□□□ -0.99
LIG3-202ENST00000378526 PLXNC1O60486 1568 aa8.9□□□□□ -0.99
LIG3-202ENST00000378526 HTR2AP28223 471 aa8.89□□□□□ -0.99
LIG3-202ENST00000378526 USP11P51784 963 aa8.89□□□□□ -0.99
LIG3-202ENST00000378526 GRB14Q14449 540 aa8.89□□□□□ -0.99
LIG3-202ENST00000378526 ELOA2Q8IYF1 753 aaPredicted RBP8.89□□□□□ -0.99
LIG3-202ENST00000378526 ZNF283Q8N7M2 679 aa8.89□□□□□ -0.99
LIG3-202ENST00000378526 ELMO1Q92556 727 aa8.89□□□□□ -0.99
LIG3-202ENST00000378526 RIT2Q99578 217 aa8.89□□□□□ -0.99
LIG3-202ENST00000378526 KANSL2Q9H9L4 492 aa8.89□□□□□ -0.99
LIG3-202ENST00000378526 TAS2R7Q9NYW3 318 aa8.89□□□□□ -0.99
LIG3-202ENST00000378526 GMIPQ9P107 970 aa8.89□□□□□ -0.99
LIG3-202ENST00000378526 SLC39A10Q9ULF5 831 aa8.89□□□□□ -0.99
LIG3-202ENST00000378526 PRCPP42785 496 aa8.89□□□□□ -0.99
LIG3-202ENST00000378526 OVGP1Q12889 678 aa8.89□□□□□ -0.99
LIG3-202ENST00000378526 OXR1Q8N573 874 aa8.89□□□□□ -0.99
LIG3-202ENST00000378526 ATL1Q8WXF7 558 aa8.89□□□□□ -0.99
LIG3-202ENST00000378526 KCNB2Q92953 911 aa8.89□□□□□ -0.99
LIG3-202ENST00000378526 RBM17Q96I25 401 aaKnown RBP8.89□□□□□ -0.99
LIG3-202ENST00000378526 AHSPQ9NZD4 102 aa8.89□□□□□ -0.99
LIG3-202ENST00000378526 OIP5O43482 229 aa8.89□□□□□ -0.99
LIG3-202ENST00000378526 TSPAN1O60635 241 aa8.89□□□□□ -0.99
LIG3-202ENST00000378526 CLPXO76031 633 aa8.89□□□□□ -0.99
LIG3-202ENST00000378526 ECHS1P30084 290 aa8.89□□□□□ -0.99
LIG3-202ENST00000378526 RGS19P49795 217 aa8.89□□□□□ -0.99
LIG3-202ENST00000378526 TAF13Q15543 124 aa8.89□□□□□ -0.99
LIG3-202ENST00000378526 KRT28Q7Z3Y7 464 aa8.89□□□□□ -0.99
LIG3-202ENST00000378526 SLC25A41Q8N5S1 370 aa8.89□□□□□ -0.99
LIG3-202ENST00000378526 ATAD1Q8NBU5 361 aa8.89□□□□□ -0.99
LIG3-202ENST00000378526 METTL6Q8TCB7 284 aa8.89□□□□□ -0.99
LIG3-202ENST00000378526 UNKLQ9H9P5 680 aaKnown RBP8.89□□□□□ -0.99
LIG3-202ENST00000378526 DNAJC16Q9Y2G8 782 aa8.89□□□□□ -0.99
LIG3-202ENST00000378526 RBM47A0AV96 593 aaKnown RBP8.89□□□□□ -0.99
LIG3-202ENST00000378526 KCNH1O95259 989 aa8.89□□□□□ -0.99
LIG3-202ENST00000378526 TPBGLP0DKB5 382 aa8.89□□□□□ -0.99
LIG3-202ENST00000378526 CDK17Q00537 523 aa8.89□□□□□ -0.99
LIG3-202ENST00000378526 NFIAQ12857 509 aa8.89□□□□□ -0.99
LIG3-202ENST00000378526 PARP6Q2NL67 630 aa8.89□□□□□ -0.99
LIG3-202ENST00000378526 SGO1Q5FBB7 561 aa8.89□□□□□ -0.99
LIG3-202ENST00000378526 GPRC6AQ5T6X5 926 aa8.89□□□□□ -0.99
LIG3-202ENST00000378526 SLC25A25Q6KCM7 469 aa8.89□□□□□ -0.99
LIG3-202ENST00000378526 KYAT3Q6YP21 454 aaKnown RBP8.89□□□□□ -0.99
LIG3-202ENST00000378526 NUDT18Q6ZVK8 323 aa8.89□□□□□ -0.99
LIG3-202ENST00000378526 SSX6Q7RTT6 188 aa8.89□□□□□ -0.99
LIG3-202ENST00000378526 ZNF614Q8N883 585 aa8.89□□□□□ -0.99
LIG3-202ENST00000378526 LEMD2Q8NC56 503 aa8.89□□□□□ -0.99
LIG3-202ENST00000378526 MCPH1Q8NEM0 835 aa8.89□□□□□ -0.99
LIG3-202ENST00000378526 SHCBP1LQ9BZQ2 653 aa8.89□□□□□ -0.99
LIG3-202ENST00000378526 GPRC5DQ9NZD1 345 aa8.89□□□□□ -0.99
LIG3-202ENST00000378526 ZNF639Q9UID6 485 aa8.89□□□□□ -0.99
LIG3-202ENST00000378526 INVSQ9Y283 1065 aa8.89□□□□□ -0.99
LIG3-202ENST00000378526 PPIP5K1Q6PFW1 1433 aa8.89□□□□□ -0.99
LIG3-202ENST00000378526 RNF123Q5XPI4 1314 aa8.89□□□□□ -0.99
LIG3-202ENST00000378526 PLD2O14939 933 aa8.89□□□□□ -0.99
LIG3-202ENST00000378526 SLC16A3O15427 465 aaKnown RBP8.89□□□□□ -0.99
LIG3-202ENST00000378526 MAGEB3O15480 346 aa8.89□□□□□ -0.99
LIG3-202ENST00000378526 ERN1O75460 977 aaKnown RBP8.89□□□□□ -0.99
LIG3-202ENST00000378526 IFNA17P01571 189 aa8.89□□□□□ -0.99
LIG3-202ENST00000378526 PET100P0DJ07 73 aa8.89□□□□□ -0.99
LIG3-202ENST00000378526 ETS2P15036 469 aa8.89□□□□□ -0.99
LIG3-202ENST00000378526 NCK1P16333 377 aa8.89□□□□□ -0.99
LIG3-202ENST00000378526 PRKACBP22694 351 aa8.89□□□□□ -0.99
LIG3-202ENST00000378526 PLEKHG6Q3KR16 790 aa8.89□□□□□ -0.99
LIG3-202ENST00000378526 VWA5B1Q5TIE3 1220 aa8.89□□□□□ -0.99
LIG3-202ENST00000378526 CYP2U1Q7Z449 544 aa8.89□□□□□ -0.99
LIG3-202ENST00000378526 GIMAP5Q96F15 307 aa8.89□□□□□ -0.99
LIG3-202ENST00000378526 DIRAS2Q96HU8 199 aa8.89□□□□□ -0.99
LIG3-202ENST00000378526 SPATA5L1Q9BVQ7 753 aa8.89□□□□□ -0.99
LIG3-202ENST00000378526 C19orf12Q9NSK7 152 aa8.89□□□□□ -0.99
LIG3-202ENST00000378526 SEC14L4Q9UDX3 406 aa8.89□□□□□ -0.99
LIG3-202ENST00000378526 SLC30A1Q9Y6M5 507 aa8.89□□□□□ -0.99
LIG3-202ENST00000378526 NPIPA7E9PJI5 369 aa8.89□□□□□ -0.99
LIG3-202ENST00000378526 SERPINE1P05121 402 aa8.89□□□□□ -0.99
LIG3-202ENST00000378526 NPIPA8P0DM63 369 aa8.89□□□□□ -0.99
LIG3-202ENST00000378526 NEK3P51956 506 aa8.89□□□□□ -0.99
LIG3-202ENST00000378526 RPL6Q02878 288 aaKnown RBP8.89□□□□□ -0.99
LIG3-202ENST00000378526 STILQ15468 1287 aa8.89□□□□□ -0.99
LIG3-202ENST00000378526 FAM187BQ17R55 369 aa8.89□□□□□ -0.99
LIG3-202ENST00000378526 LIN52Q52LA3 116 aa8.89□□□□□ -0.99
LIG3-202ENST00000378526 TTMPQ5BVD1 217 aa8.89□□□□□ -0.99
LIG3-202ENST00000378526 ERI1Q8IV48 349 aaKnown RBP8.89□□□□□ -0.99
LIG3-202ENST00000378526 GMCL1Q96IK5 515 aa8.89□□□□□ -0.99
LIG3-202ENST00000378526 VCPIP1Q96JH7 1222 aa8.89□□□□□ -0.99
LIG3-202ENST00000378526 CD93Q9NPY3 652 aa8.89□□□□□ -0.99
LIG3-202ENST00000378526 PRPF19Q9UMS4 504 aaKnown RBP8.89□□□□□ -0.99
LIG3-202ENST00000378526 NUP160Q12769 1436 aa8.89□□□□□ -0.99
LIG3-202ENST00000378526 ILVBLA1L0T0 632 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms