RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 GP5P40197 560 aa15.34■□□□□ 0.05
NPHP4-201ENST00000378156 CRYBB1P53674 252 aaPredicted RBP15.34■□□□□ 0.05
NPHP4-201ENST00000378156 MMRN1Q13201 1228 aa15.34■□□□□ 0.05
NPHP4-201ENST00000378156 P3H2Q8IVL5 708 aa15.34■□□□□ 0.05
NPHP4-201ENST00000378156 VPS37AQ8NEZ2 397 aa15.34■□□□□ 0.05
NPHP4-201ENST00000378156 CNDP1Q96KN2 507 aa15.34■□□□□ 0.05
NPHP4-201ENST00000378156 VAT1Q99536 393 aa15.34■□□□□ 0.05
NPHP4-201ENST00000378156 CYP4F12Q9HCS2 524 aa15.34■□□□□ 0.05
NPHP4-201ENST00000378156 C15orf41Q9Y2V0 281 aa15.34■□□□□ 0.05
NPHP4-201ENST00000378156 H2AFYO75367 372 aaKnown RBP15.33■□□□□ 0.05
NPHP4-201ENST00000378156 USP2O75604 605 aaPredicted RBP15.33■□□□□ 0.05
NPHP4-201ENST00000378156 PKN3Q6P5Z2 889 aa15.33■□□□□ 0.05
NPHP4-201ENST00000378156 GPR20Q99678 358 aa15.33■□□□□ 0.05
NPHP4-201ENST00000378156 RNPEPQ9H4A4 650 aa15.33■□□□□ 0.05
NPHP4-201ENST00000378156 ABCC13Q9NSE7 274 aa15.33■□□□□ 0.05
NPHP4-201ENST00000378156 ZNF541Q9H0D2 1346 aa15.33■□□□□ 0.04
NPHP4-201ENST00000378156 GLTPD2A6NH11 291 aa15.33■□□□□ 0.04
NPHP4-201ENST00000378156 PRR23D1E9PI22 279 aaPredicted RBP15.33■□□□□ 0.04
NPHP4-201ENST00000378156 PRR23D2P0DMB1 279 aaPredicted RBP15.33■□□□□ 0.04
NPHP4-201ENST00000378156 THRAP10827 490 aa15.33■□□□□ 0.04
NPHP4-201ENST00000378156 PLOD1Q02809 727 aaPredicted RBP15.33■□□□□ 0.04
NPHP4-201ENST00000378156 FAM110CQ1W6H9 321 aa15.33■□□□□ 0.04
NPHP4-201ENST00000378156 POU5F2Q8N7G0 328 aa15.33■□□□□ 0.04
NPHP4-201ENST00000378156 AGAP11Q8TF27 550 aa15.33■□□□□ 0.04
NPHP4-201ENST00000378156 LRRN4Q8WUT4 740 aa15.33■□□□□ 0.04
NPHP4-201ENST00000378156 NCKIPSDQ9NZQ3 722 aa15.33■□□□□ 0.04
NPHP4-201ENST00000378156 ACTL7BQ9Y614 415 aa15.33■□□□□ 0.04
NPHP4-201ENST00000378156 NOGQ13253 232 aa15.33■□□□□ 0.04
NPHP4-201ENST00000378156 ZNF284Q2VY69 593 aa15.33■□□□□ 0.04
NPHP4-201ENST00000378156 ANKRD52Q8NB46 1076 aa15.33■□□□□ 0.04
NPHP4-201ENST00000378156 B3GALNT2Q8NCR0 500 aa15.33■□□□□ 0.04
NPHP4-201ENST00000378156 PPTC7Q8NI37 304 aa15.33■□□□□ 0.04
NPHP4-201ENST00000378156 ADGRA3Q8IWK6 1321 aa15.33■□□□□ 0.04
NPHP4-201ENST00000378156 TRUB2O95900 331 aaKnown RBP15.33■□□□□ 0.04
NPHP4-201ENST00000378156 PSMC3P17980 439 aa15.33■□□□□ 0.04
NPHP4-201ENST00000378156 NPY2RP49146 381 aa15.33■□□□□ 0.04
NPHP4-201ENST00000378156 CSHL1Q14406 222 aa15.33■□□□□ 0.04
NPHP4-201ENST00000378156 PRKD2Q9BZL6 878 aa15.33■□□□□ 0.04
NPHP4-201ENST00000378156 TMEM245Q9H330 911 aa15.33■□□□□ 0.04
NPHP4-201ENST00000378156 ST3GAL5Q9UNP4 418 aa15.33■□□□□ 0.04
NPHP4-201ENST00000378156 C5orf58C9J3I9 102 aa15.32■□□□□ 0.04
NPHP4-201ENST00000378156 KLRC2P26717 231 aa15.32■□□□□ 0.04
NPHP4-201ENST00000378156 WEE1P30291 646 aa15.32■□□□□ 0.04
NPHP4-201ENST00000378156 GRM5P41594 1212 aa15.32■□□□□ 0.04
NPHP4-201ENST00000378156 DEFB115Q30KQ5 88 aa15.32■□□□□ 0.04
NPHP4-201ENST00000378156 WASHC2DQ5SRD0 308 aa15.32■□□□□ 0.04
NPHP4-201ENST00000378156 SPATA16Q9BXB7 569 aa15.32■□□□□ 0.04
NPHP4-201ENST00000378156 DOLKQ9UPQ8 538 aa15.32■□□□□ 0.04
NPHP4-201ENST00000378156 STARD13Q9Y3M8 1113 aa15.32■□□□□ 0.04
NPHP4-201ENST00000378156 RGPD1P0DJD0 1748 aa15.32■□□□□ 0.04
NPHP4-201ENST00000378156 KANSL1LA0AUZ9 987 aa15.32■□□□□ 0.04
NPHP4-201ENST00000378156 USP12O75317 370 aa15.32■□□□□ 0.04
NPHP4-201ENST00000378156 CLPTM1O96005 669 aa15.32■□□□□ 0.04
NPHP4-201ENST00000378156 CD151P48509 253 aa15.32■□□□□ 0.04
NPHP4-201ENST00000378156 SEL1L3Q68CR1 1132 aa15.32■□□□□ 0.04
NPHP4-201ENST00000378156 C16orf46Q6P387 395 aa15.32■□□□□ 0.04
NPHP4-201ENST00000378156 MARCH2Q9P0N8 246 aa15.32■□□□□ 0.04
NPHP4-201ENST00000378156 OR12D3Q9UGF7 316 aa15.32■□□□□ 0.04
NPHP4-201ENST00000378156 CDH9Q9ULB4 789 aa15.32■□□□□ 0.04
NPHP4-201ENST00000378156 PLA2G4CQ9UP65 541 aa15.32■□□□□ 0.04
NPHP4-201ENST00000378156 PCDHA2Q9Y5H9 948 aa15.32■□□□□ 0.04
NPHP4-201ENST00000378156 FOXO6A8MYZ6 492 aa15.32■□□□□ 0.04
NPHP4-201ENST00000378156 ALADP13716 330 aa15.32■□□□□ 0.04
NPHP4-201ENST00000378156 SNX30Q5VWJ9 437 aa15.32■□□□□ 0.04
NPHP4-201ENST00000378156 PDPK2PQ6A1A2 396 aa15.32■□□□□ 0.04
NPHP4-201ENST00000378156 TMPRSS6Q8IU80 811 aa15.32■□□□□ 0.04
NPHP4-201ENST00000378156 MYO1HQ8N1T3 1032 aa15.32■□□□□ 0.04
NPHP4-201ENST00000378156 LRRC52Q8N7C0 313 aa15.32■□□□□ 0.04
NPHP4-201ENST00000378156 RBBP8Q99708 897 aa15.32■□□□□ 0.04
NPHP4-201ENST00000378156 DMAC2Q9NW81 257 aa15.32■□□□□ 0.04
NPHP4-201ENST00000378156 TSPAN3O60637 253 aa15.32■□□□□ 0.04
NPHP4-201ENST00000378156 ITGAVP06756 1048 aa15.32■□□□□ 0.04
NPHP4-201ENST00000378156 ABHD2P08910 425 aa15.32■□□□□ 0.04
NPHP4-201ENST00000378156 SLC1A6P48664 564 aa15.32■□□□□ 0.04
NPHP4-201ENST00000378156 IKBKEQ14164 716 aa15.32■□□□□ 0.04
NPHP4-201ENST00000378156 TRMT5Q32P41 509 aaKnown RBP15.32■□□□□ 0.04
NPHP4-201ENST00000378156 FAM183BPQ6ZVS7 135 aa15.32■□□□□ 0.04
NPHP4-201ENST00000378156 BBS12Q6ZW61 710 aa15.32■□□□□ 0.04
NPHP4-201ENST00000378156 LGI2Q8N0V4 545 aa15.32■□□□□ 0.04
NPHP4-201ENST00000378156 C18orf25Q96B23 403 aaPredicted RBP15.32■□□□□ 0.04
NPHP4-201ENST00000378156 PRDM16Q9HAZ2 1276 aa15.32■□□□□ 0.04
NPHP4-201ENST00000378156 CAB39Q9Y376 341 aaPredicted RBP15.32■□□□□ 0.04
NPHP4-201ENST00000378156 PRR23AA6NEV1 266 aa15.31■□□□□ 0.04
NPHP4-201ENST00000378156 UNC5CO95185 931 aa15.31■□□□□ 0.04
NPHP4-201ENST00000378156 AMHP03971 560 aa15.31■□□□□ 0.04
NPHP4-201ENST00000378156 CDK16Q00536 496 aa15.31■□□□□ 0.04
NPHP4-201ENST00000378156 HIST2H2ACQ16777 129 aaPredicted RBP15.31■□□□□ 0.04
NPHP4-201ENST00000378156 HIST2H2AA3Q6FI13 130 aa15.31■□□□□ 0.04
NPHP4-201ENST00000378156 LPCAT1Q8NF37 534 aa15.31■□□□□ 0.04
NPHP4-201ENST00000378156 ZNF333Q96JL9 665 aa15.31■□□□□ 0.04
NPHP4-201ENST00000378156 SENP6Q9GZR1 1112 aaPredicted RBP15.31■□□□□ 0.04
NPHP4-201ENST00000378156 ATXN3LQ9H3M9 355 aa15.31■□□□□ 0.04
NPHP4-201ENST00000378156 ETNK2Q9NVF9 386 aa15.31■□□□□ 0.04
NPHP4-201ENST00000378156 CLCA2Q9UQC9 943 aa15.31■□□□□ 0.04
NPHP4-201ENST00000378156 SNED1Q8TER0 1413 aa15.31■□□□□ 0.04
NPHP4-201ENST00000378156 NCF1BA6NI72 391 aaPredicted RBP15.31■□□□□ 0.04
NPHP4-201ENST00000378156 ZNF839A8K0R7 811 aa15.31■□□□□ 0.04
NPHP4-201ENST00000378156 NCF1CA8MVU1 366 aaPredicted RBP15.31■□□□□ 0.04
NPHP4-201ENST00000378156 MEI4A8MW99 385 aa15.31■□□□□ 0.04
NPHP4-201ENST00000378156 EVPLLA8MZ36 301 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms