RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 AZIN2Q96A70 460 aa11.21□□□□□ -0.62
BEST1-201ENST00000378043 ZNF560Q96MR9 790 aa11.21□□□□□ -0.62
BEST1-201ENST00000378043 AGAP3Q96P47 875 aa11.21□□□□□ -0.62
BEST1-201ENST00000378043 SLC2A13Q96QE2 648 aa11.21□□□□□ -0.62
BEST1-201ENST00000378043 OXCT2Q9BYC2 517 aaPredicted RBP11.21□□□□□ -0.62
BEST1-201ENST00000378043 SOX13Q9UN79 622 aa11.21□□□□□ -0.62
BEST1-201ENST00000378043 ZNF236Q9UL36 1845 aa11.2□□□□□ -0.62
BEST1-201ENST00000378043 PDHXO00330 501 aa11.2□□□□□ -0.62
BEST1-201ENST00000378043 MAP3K13O43283 966 aa11.2□□□□□ -0.62
BEST1-201ENST00000378043 STRNO43815 780 aa11.2□□□□□ -0.62
BEST1-201ENST00000378043 ANPEPP15144 967 aa11.2□□□□□ -0.62
BEST1-201ENST00000378043 ALOX15P16050 662 aaPredicted RBP11.2□□□□□ -0.62
BEST1-201ENST00000378043 NPR3P17342 541 aa11.2□□□□□ -0.62
BEST1-201ENST00000378043 PTPN3P26045 913 aa11.2□□□□□ -0.62
BEST1-201ENST00000378043 GP5P40197 560 aa11.2□□□□□ -0.62
BEST1-201ENST00000378043 SEMA3BQ13214 749 aa11.2□□□□□ -0.62
BEST1-201ENST00000378043 SNX17Q15036 470 aa11.2□□□□□ -0.62
BEST1-201ENST00000378043 INSCQ1MX18 579 aa11.2□□□□□ -0.62
BEST1-201ENST00000378043 TNS4Q8IZW8 715 aa11.2□□□□□ -0.62
BEST1-201ENST00000378043 SLC25A41Q8N5S1 370 aa11.2□□□□□ -0.62
BEST1-201ENST00000378043 ADAM32Q8TC27 787 aa11.2□□□□□ -0.62
BEST1-201ENST00000378043 DNAJB3Q8WWF6 145 aa11.2□□□□□ -0.62
BEST1-201ENST00000378043 ISL2Q96A47 359 aa11.2□□□□□ -0.62
BEST1-201ENST00000378043 TNIP3Q96KP6 325 aa11.2□□□□□ -0.62
BEST1-201ENST00000378043 AGAP2Q99490 1192 aa11.2□□□□□ -0.62
BEST1-201ENST00000378043 PRDM16Q9HAZ2 1276 aa11.2□□□□□ -0.62
BEST1-201ENST00000378043 WDR6Q9NNW5 1121 aaKnown RBP11.2□□□□□ -0.62
BEST1-201ENST00000378043 SNX15Q9NRS6 342 aa11.2□□□□□ -0.62
BEST1-201ENST00000378043 PPM1HQ9ULR3 514 aa11.2□□□□□ -0.62
BEST1-201ENST00000378043 ZCWPW2A0A1B0GU75 182 aa11.2□□□□□ -0.62
BEST1-201ENST00000378043 SMIM35A0A1B0GVV1 85 aa11.2□□□□□ -0.62
BEST1-201ENST00000378043 HUS1O60921 280 aa11.2□□□□□ -0.62
BEST1-201ENST00000378043 CYP2C9P11712 490 aa11.2□□□□□ -0.62
BEST1-201ENST00000378043 ERCC2P18074 760 aa11.2□□□□□ -0.62
BEST1-201ENST00000378043 ADRA1BP35368 520 aa11.2□□□□□ -0.62
BEST1-201ENST00000378043 PNPLA4P41247 253 aa11.2□□□□□ -0.62
BEST1-201ENST00000378043 HARS2P49590 506 aaKnown RBP11.2□□□□□ -0.62
BEST1-201ENST00000378043 ITGA9Q13797 1035 aa11.2□□□□□ -0.62
BEST1-201ENST00000378043 RALGPS1Q5JS13 557 aa11.2□□□□□ -0.62
BEST1-201ENST00000378043 IRGCQ6NXR0 463 aa11.2□□□□□ -0.62
BEST1-201ENST00000378043 TMEM135Q86UB9 458 aa11.2□□□□□ -0.62
BEST1-201ENST00000378043 RSPH3Q86UC2 560 aa11.2□□□□□ -0.62
BEST1-201ENST00000378043 DCLK2Q8N568 766 aa11.2□□□□□ -0.62
BEST1-201ENST00000378043 NPWQ8N729 165 aa11.2□□□□□ -0.62
BEST1-201ENST00000378043 GSTCDQ8NEC7 633 aa11.2□□□□□ -0.62
BEST1-201ENST00000378043 WNT8BQ93098 351 aa11.2□□□□□ -0.62
BEST1-201ENST00000378043 ATXN7L3BQ96GX2 97 aa11.2□□□□□ -0.62
BEST1-201ENST00000378043 STN1Q9H668 368 aaKnown RBP11.2□□□□□ -0.62
BEST1-201ENST00000378043 TMEM30AQ9NV96 361 aa11.2□□□□□ -0.62
BEST1-201ENST00000378043 RNF181Q9P0P0 153 aa11.2□□□□□ -0.62
BEST1-201ENST00000378043 CACNG4Q9UBN1 327 aa11.2□□□□□ -0.62
BEST1-201ENST00000378043 APOBEC2Q9Y235 224 aaKnown RBP11.2□□□□□ -0.62
BEST1-201ENST00000378043 NRCAMQ92823 1304 aa11.19□□□□□ -0.62
BEST1-201ENST00000378043 EEF2KO00418 725 aaKnown RBP11.19□□□□□ -0.62
BEST1-201ENST00000378043 PPP1R12AO14974 1030 aaPredicted RBP11.19□□□□□ -0.62
BEST1-201ENST00000378043 SORBS2O94875 1100 aaKnown RBP11.19□□□□□ -0.62
BEST1-201ENST00000378043 F2P00734 622 aa11.19□□□□□ -0.62
BEST1-201ENST00000378043 RALBP11234 206 aa11.19□□□□□ -0.62
BEST1-201ENST00000378043 PTPN1P18031 435 aaKnown RBP11.19□□□□□ -0.62
BEST1-201ENST00000378043 WARSP23381 471 aaKnown RBP11.19□□□□□ -0.62
BEST1-201ENST00000378043 GRK2P25098 689 aa11.19□□□□□ -0.62
BEST1-201ENST00000378043 CCNHP51946 323 aaPredicted RBP11.19□□□□□ -0.62
BEST1-201ENST00000378043 ADAM17P78536 824 aa11.19□□□□□ -0.62
BEST1-201ENST00000378043 DEUP1Q05D60 604 aa11.19□□□□□ -0.62
BEST1-201ENST00000378043 IFRD2Q12894 506 aaPredicted RBP11.19□□□□□ -0.62
BEST1-201ENST00000378043 DLG2Q15700 870 aa11.19□□□□□ -0.62
BEST1-201ENST00000378043 SV2CQ496J9 727 aa11.19□□□□□ -0.62
BEST1-201ENST00000378043 SPANXN3Q5MJ09 141 aa11.19□□□□□ -0.62
BEST1-201ENST00000378043 WSCD1Q658N2 575 aa11.19□□□□□ -0.62
BEST1-201ENST00000378043 KCTD11Q693B1 232 aa11.19□□□□□ -0.62
BEST1-201ENST00000378043 FSTL4Q6MZW2 842 aa11.19□□□□□ -0.62
BEST1-201ENST00000378043 TMEM154Q6P9G4 183 aa11.19□□□□□ -0.62
BEST1-201ENST00000378043 NAPRTQ6XQN6 538 aa11.19□□□□□ -0.62
BEST1-201ENST00000378043 GPR142Q7Z601 462 aa11.19□□□□□ -0.62
BEST1-201ENST00000378043 CTU1Q7Z7A3 348 aaKnown RBP11.19□□□□□ -0.62
BEST1-201ENST00000378043 DPP9Q86TI2 863 aa11.19□□□□□ -0.62
BEST1-201ENST00000378043 SMG8Q8ND04 991 aaKnown RBP11.19□□□□□ -0.62
BEST1-201ENST00000378043 KCTD13Q8WZ19 329 aa11.19□□□□□ -0.62
BEST1-201ENST00000378043 MS4A4AQ96JQ5 239 aa11.19□□□□□ -0.62
BEST1-201ENST00000378043 ZNF184Q99676 751 aaPredicted RBP11.19□□□□□ -0.62
BEST1-201ENST00000378043 RBBP8Q99708 897 aa11.19□□□□□ -0.62
BEST1-201ENST00000378043 CPNE1Q99829 537 aa11.19□□□□□ -0.62
BEST1-201ENST00000378043 TINF2Q9BSI4 451 aa11.19□□□□□ -0.62
BEST1-201ENST00000378043 ABHD16BQ9H3Z7 469 aa11.19□□□□□ -0.62
BEST1-201ENST00000378043 YJEFN3A6XGL0 299 aa11.19□□□□□ -0.62
BEST1-201ENST00000378043 BTBD19C9JJ37 291 aa11.19□□□□□ -0.62
BEST1-201ENST00000378043 PTGESO14684 152 aa11.19□□□□□ -0.62
BEST1-201ENST00000378043 AP2A1O95782 977 aa11.19□□□□□ -0.62
BEST1-201ENST00000378043 SKIP12755 728 aa11.19□□□□□ -0.62
BEST1-201ENST00000378043 CD68P34810 354 aaPredicted RBP11.19□□□□□ -0.62
BEST1-201ENST00000378043 ABCG1P45844 678 aa11.19□□□□□ -0.62
BEST1-201ENST00000378043 TKTL1P51854 596 aa11.19□□□□□ -0.62
BEST1-201ENST00000378043 ABCE1P61221 599 aaKnown RBP11.19□□□□□ -0.62
BEST1-201ENST00000378043 MXRA7P84157 204 aa11.19□□□□□ -0.62
BEST1-201ENST00000378043 CDC42EP1Q00587 391 aa11.19□□□□□ -0.62
BEST1-201ENST00000378043 LBRQ14739 615 aaKnown RBP11.19□□□□□ -0.62
BEST1-201ENST00000378043 PCBP1Q15365 356 aaKnown RBP eCLIP11.19□□□□□ -0.62
BEST1-201ENST00000378043 GRTP1Q5TC63 336 aa11.19□□□□□ -0.62
BEST1-201ENST00000378043 C1orf146Q5VVC0 180 aa11.19□□□□□ -0.62
BEST1-201ENST00000378043 RNF111Q6ZNA4 994 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms