RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 GSTK1Q9Y2Q3 226 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 FAM92AA1XBS5 289 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 AGPSO00116 658 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 SPATA31C1P0DKV0 1188 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 ENO3P13929 434 aaPredicted RBP5.04□□□□□ -1.6
PCDH9-201ENST00000377861 EEF1B2P24534 225 aaKnown RBP5.04□□□□□ -1.6
PCDH9-201ENST00000377861 MRPS9P82933 396 aaKnown RBP5.04□□□□□ -1.6
PCDH9-201ENST00000377861 RHDQ02161 417 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 SRSF11Q05519 484 aaKnown RBP5.04□□□□□ -1.6
PCDH9-201ENST00000377861 PGAM4Q8N0Y7 254 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 DHRSXQ8N5I4 330 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 CYP2W1Q8TAV3 490 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 CETPP11597 493 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 DALRD3Q5D0E6 543 aaKnown RBP5.04□□□□□ -1.6
PCDH9-201ENST00000377861 RRM2BQ7LG56 351 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 TOP6BLQ8N6T0 577 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 PIK3C3Q8NEB9 887 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 OSBPL2Q9H1P3 480 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 PABPC1P11940 636 aaKnown RBP5.04□□□□□ -1.6
PCDH9-201ENST00000377861 ATP13A4Q4VNC1 1196 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 TRUB1Q8WWH5 349 aaKnown RBP5.04□□□□□ -1.6
PCDH9-201ENST00000377861 PRMT6Q96LA8 375 aaPredicted RBP5.04□□□□□ -1.6
PCDH9-201ENST00000377861 IFT80Q9P2H3 777 aaPredicted RBP5.04□□□□□ -1.6
PCDH9-201ENST00000377861 GOLGA8RI6L899 631 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 RPN2P04844 631 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 HIST2H2ACQ16777 129 aaPredicted RBP5.04□□□□□ -1.6
PCDH9-201ENST00000377861 HIST2H2AA3Q6FI13 130 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 IFNLR1Q8IU57 520 aaPredicted RBP5.04□□□□□ -1.6
PCDH9-201ENST00000377861 C12orf42Q96LP6 360 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 HERC2P3Q9BVR0 1158 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 MAFBQ9Y5Q3 323 aaPredicted RBP5.04□□□□□ -1.6
PCDH9-201ENST00000377861 IL1RNP18510 177 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 CCNCP24863 283 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 SERPINB1P30740 379 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 HECTD3Q5T447 861 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 C1orf54Q8WWF1 131 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 TMEM117Q9H0C3 514 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 GDAP2Q9NXN4 497 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.04□□□□□ -1.6
PCDH9-201ENST00000377861 UBA6A0AVT1 1052 aaPredicted RBP5.04□□□□□ -1.6
PCDH9-201ENST00000377861 TRIM24O15164 1050 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 UBDO15205 165 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 USP1O94782 785 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 IPO13O94829 963 aaKnown RBP5.04□□□□□ -1.6
PCDH9-201ENST00000377861 HLA-DRAP01903 254 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 KCNC3Q14003 757 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 PRPF39Q86UA1 669 aaKnown RBP5.04□□□□□ -1.6
PCDH9-201ENST00000377861 CYP4Z1Q86W10 505 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 HAS1Q92839 578 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 GMIPQ9P107 970 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 SLC13A4Q9UKG4 626 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 SH3GLB1Q9Y371 365 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 PKP3Q9Y446 797 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 ZNF185O15231 689 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 SLC7A1P30825 629 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 ZNF783Q6ZMS7 281 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 BORCS6Q96GS4 357 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 ETAA1Q9NY74 926 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 TNFAIP8L3Q5GJ75 292 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 PRR5LQ6MZQ0 368 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 PANX3Q96QZ0 392 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 DNAJC28Q9NX36 388 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 MBD2Q9UBB5 411 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 H3BUI4 141 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 PDE2AO00408 941 aaPredicted RBP5.04□□□□□ -1.6
PCDH9-201ENST00000377861 ZNF544Q6NX49 715 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 FAM71DQ8N9W8 422 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 SLC35B2Q8TB61 432 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 ELOVL4Q9GZR5 314 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 PCDHB1Q9Y5F3 818 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 UNC13AQ9UPW8 1703 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 IGKV6D-41A0A0C4DH26 115 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 BPGMP07738 259 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 CXCR2P25025 360 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 ADSSP30520 456 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 SUOXP51687 545 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 CLCN5P51795 746 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 ZNF347Q96SE7 839 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 SMURF2Q9HAU4 748 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 C20orf96Q9NUD7 363 aaPredicted RBP5.04□□□□□ -1.6
PCDH9-201ENST00000377861 NCF1P14598 390 aaPredicted RBP5.04□□□□□ -1.6
PCDH9-201ENST00000377861 HNMTP50135 292 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 KCTD1Q719H9 257 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 C9orf43Q8TAL5 461 aaPredicted RBP5.04□□□□□ -1.6
PCDH9-201ENST00000377861 CPXM1Q96SM3 734 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 SLC6A3Q01959 620 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 TRIM16LQ309B1 348 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 CLPTM1LQ96KA5 538 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 RNF157Q96PX1 679 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 FANCEQ9HB96 536 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 ARHGAP28Q9P2N2 729 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 ENDOUP21128 410 aaKnown RBP5.04□□□□□ -1.6
PCDH9-201ENST00000377861 SAT1P21673 171 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 SHMT1P34896 483 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 SLC1A6P48664 564 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 FAM212AQ96EL1 285 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 ZBTB21Q9ULJ3 1066 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 PCDHGB1Q9Y5G3 927 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 LIPMQ5VYY2 423 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 XKRXQ6PP77 449 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms