RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 MPP6Q9NZW5 540 aa14.83□□□□□ -0.04
TCOF1-202ENST00000377797 CNTN3Q9P232 1028 aa14.83□□□□□ -0.04
TCOF1-202ENST00000377797 TULP2O00295 520 aa14.83□□□□□ -0.04
TCOF1-202ENST00000377797 ASMTLO95671 621 aa14.83□□□□□ -0.04
TCOF1-202ENST00000377797 GLP2RO95838 553 aa14.83□□□□□ -0.04
TCOF1-202ENST00000377797 DCAF12L1Q5VU92 463 aa14.83□□□□□ -0.04
TCOF1-202ENST00000377797 ZNF470Q6ECI4 717 aa14.83□□□□□ -0.04
TCOF1-202ENST00000377797 C12orf50Q8NA57 414 aaPredicted RBP14.83□□□□□ -0.04
TCOF1-202ENST00000377797 LPCAT1Q8NF37 534 aa14.83□□□□□ -0.04
TCOF1-202ENST00000377797 DQX1Q8TE96 717 aaKnown RBP14.83□□□□□ -0.04
TCOF1-202ENST00000377797 DPF3Q92784 378 aa14.83□□□□□ -0.04
TCOF1-202ENST00000377797 TBL1YQ9BQ87 522 aa14.83□□□□□ -0.04
TCOF1-202ENST00000377797 ILKAPQ9H0C8 392 aaPredicted RBP14.83□□□□□ -0.04
TCOF1-202ENST00000377797 SDCBP2Q9H190 292 aa14.83□□□□□ -0.04
TCOF1-202ENST00000377797 CD274Q9NZQ7 290 aa14.83□□□□□ -0.04
TCOF1-202ENST00000377797 ANGPTL2Q9UKU9 493 aa14.83□□□□□ -0.04
TCOF1-202ENST00000377797 LOC100653049A0A140TA62 436 aa14.83□□□□□ -0.04
TCOF1-202ENST00000377797 CFAP99D6REC4 459 aa14.83□□□□□ -0.04
TCOF1-202ENST00000377797 PAGE1O75459 146 aa14.83□□□□□ -0.04
TCOF1-202ENST00000377797 KRT34O76011 436 aa14.83□□□□□ -0.04
TCOF1-202ENST00000377797 ABHD2P08910 425 aa14.83□□□□□ -0.04
TCOF1-202ENST00000377797 ADRA1DP25100 572 aa14.83□□□□□ -0.04
TCOF1-202ENST00000377797 SERPINB4P48594 390 aa14.83□□□□□ -0.04
TCOF1-202ENST00000377797 CRYBG2Q8N1P7 616 aa14.83□□□□□ -0.04
TCOF1-202ENST00000377797 TMEM199Q8N511 208 aa14.83□□□□□ -0.04
TCOF1-202ENST00000377797 PDZD8Q8NEN9 1154 aa14.83□□□□□ -0.04
TCOF1-202ENST00000377797 APBB2Q92870 758 aa14.83□□□□□ -0.04
TCOF1-202ENST00000377797 CIPCQ9C0C6 399 aa14.83□□□□□ -0.04
TCOF1-202ENST00000377797 UBA2Q9UBT2 640 aaPredicted RBP14.83□□□□□ -0.04
TCOF1-202ENST00000377797 KIF3CO14782 793 aa14.82□□□□□ -0.04
TCOF1-202ENST00000377797 SUPT7LO94864 414 aa14.82□□□□□ -0.04
TCOF1-202ENST00000377797 RALBP11234 206 aa14.82□□□□□ -0.04
TCOF1-202ENST00000377797 CD151P48509 253 aa14.82□□□□□ -0.04
TCOF1-202ENST00000377797 ATXN1P54253 815 aaKnown RBP14.82□□□□□ -0.04
TCOF1-202ENST00000377797 AIF1P55008 147 aa14.82□□□□□ -0.04
TCOF1-202ENST00000377797 ECHDC2Q86YB7 292 aa14.82□□□□□ -0.04
TCOF1-202ENST00000377797 CCDC185Q8N715 623 aa14.82□□□□□ -0.04
TCOF1-202ENST00000377797 EMID1Q96A84 441 aaPredicted RBP14.82□□□□□ -0.04
TCOF1-202ENST00000377797 GPR88Q9GZN0 384 aa14.82□□□□□ -0.04
TCOF1-202ENST00000377797 XYLT2Q9H1B5 865 aa14.82□□□□□ -0.04
TCOF1-202ENST00000377797 Q9H521 79 aa14.82□□□□□ -0.04
TCOF1-202ENST00000377797 GPAMQ9HCL2 828 aa14.82□□□□□ -0.04
TCOF1-202ENST00000377797 A0A1W2PQH9 124 aa14.82□□□□□ -0.04
TCOF1-202ENST00000377797 HEATR9A2RTY3 570 aa14.82□□□□□ -0.04
TCOF1-202ENST00000377797 YJEFN3A6XGL0 299 aa14.82□□□□□ -0.04
TCOF1-202ENST00000377797 E7ENQ6 273 aa14.82□□□□□ -0.04
TCOF1-202ENST00000377797 HNRNPCL1O60812 293 aaKnown RBP14.82□□□□□ -0.04
TCOF1-202ENST00000377797 EOMESO95936 686 aa14.82□□□□□ -0.04
TCOF1-202ENST00000377797 HSPA8P11142 646 aaKnown RBP14.82□□□□□ -0.04
TCOF1-202ENST00000377797 HDCP19113 662 aa14.82□□□□□ -0.04
TCOF1-202ENST00000377797 PTGIRP43119 386 aa14.82□□□□□ -0.04
TCOF1-202ENST00000377797 DAOAP59103 153 aa14.82□□□□□ -0.04
TCOF1-202ENST00000377797 N4BP2L1Q5TBK1 243 aaPredicted RBP14.82□□□□□ -0.04
TCOF1-202ENST00000377797 ZNF572Q7Z3I7 529 aaPredicted RBP14.82□□□□□ -0.04
TCOF1-202ENST00000377797 PYROXD2Q8N2H3 581 aa14.82□□□□□ -0.04
TCOF1-202ENST00000377797 RSPH1Q8WYR4 309 aa14.82□□□□□ -0.04
TCOF1-202ENST00000377797 APOPT1Q96IL0 206 aa14.82□□□□□ -0.04
TCOF1-202ENST00000377797 NOP53Q9NZM5 478 aaKnown RBP14.82□□□□□ -0.04
TCOF1-202ENST00000377797 SEPT3Q9UH03 358 aa14.82□□□□□ -0.04
TCOF1-202ENST00000377797 TRMT6Q9UJA5 497 aaKnown RBP14.82□□□□□ -0.04
TCOF1-202ENST00000377797 CHUKO15111 745 aa14.82□□□□□ -0.04
TCOF1-202ENST00000377797 ABCG1P45844 678 aa14.82□□□□□ -0.04
TCOF1-202ENST00000377797 TXNRD3NBQ6F5E7 133 aa14.82□□□□□ -0.04
TCOF1-202ENST00000377797 SPDYE1Q8NFV5 336 aaPredicted RBP14.82□□□□□ -0.04
TCOF1-202ENST00000377797 PBXIP1Q96AQ6 731 aa14.82□□□□□ -0.04
TCOF1-202ENST00000377797 KCTD15Q96SI1 283 aaPredicted RBP14.82□□□□□ -0.04
TCOF1-202ENST00000377797 UNKQ9C0B0 810 aaKnown RBP14.82□□□□□ -0.04
TCOF1-202ENST00000377797 POLR1EQ9GZS1 481 aaKnown RBP14.82□□□□□ -0.04
TCOF1-202ENST00000377797 IL22Q9GZX6 179 aa14.82□□□□□ -0.04
TCOF1-202ENST00000377797 ACSS3Q9H6R3 686 aa14.82□□□□□ -0.04
TCOF1-202ENST00000377797 RCOR3Q9P2K3 495 aaPredicted RBP14.82□□□□□ -0.04
TCOF1-202ENST00000377797 SHANK3Q9BYB0 1731 aa14.82□□□□□ -0.04
TCOF1-202ENST00000377797 A0A0U1RQF3 1178 aa14.82□□□□□ -0.04
TCOF1-202ENST00000377797 FANCGO15287 622 aa14.82□□□□□ -0.04
TCOF1-202ENST00000377797 SLC10A3P09131 477 aa14.82□□□□□ -0.04
TCOF1-202ENST00000377797 TCF4P15884 667 aa14.82□□□□□ -0.04
TCOF1-202ENST00000377797 HADHAP40939 763 aa14.82□□□□□ -0.04
TCOF1-202ENST00000377797 CSE1LP55060 971 aaKnown RBP14.82□□□□□ -0.04
TCOF1-202ENST00000377797 GJA9P57773 515 aa14.82□□□□□ -0.04
TCOF1-202ENST00000377797 CSHL1Q14406 222 aa14.82□□□□□ -0.04
TCOF1-202ENST00000377797 SKIV2LQ15477 1246 aaKnown RBP14.82□□□□□ -0.04
TCOF1-202ENST00000377797 TAF11Q15544 211 aa14.82□□□□□ -0.04
TCOF1-202ENST00000377797 GRAMD1BQ3KR37 738 aa14.82□□□□□ -0.04
TCOF1-202ENST00000377797 PDPK2PQ6A1A2 396 aa14.82□□□□□ -0.04
TCOF1-202ENST00000377797 MS4A4AQ96JQ5 239 aa14.82□□□□□ -0.04
TCOF1-202ENST00000377797 EBNA1BP2Q99848 306 aaKnown RBP14.82□□□□□ -0.04
TCOF1-202ENST00000377797 EMILIN2Q9BXX0 1053 aa14.82□□□□□ -0.04
TCOF1-202ENST00000377797 CYP4F12Q9HCS2 524 aa14.82□□□□□ -0.04
TCOF1-202ENST00000377797 KLC4Q9NSK0 619 aa14.82□□□□□ -0.04
TCOF1-202ENST00000377797 A0A096LPK6 155 aa14.81□□□□□ -0.04
TCOF1-202ENST00000377797 B2RBV5 119 aa14.81□□□□□ -0.04
TCOF1-202ENST00000377797 KCNE1P15382 129 aa14.81□□□□□ -0.04
TCOF1-202ENST00000377797 HMOX2P30519 316 aa14.81□□□□□ -0.04
TCOF1-202ENST00000377797 ACTN3Q08043 901 aaPredicted RBP14.81□□□□□ -0.04
TCOF1-202ENST00000377797 TMTC4Q5T4D3 741 aa14.81□□□□□ -0.04
TCOF1-202ENST00000377797 THEMIS2Q5TEJ8 643 aa14.81□□□□□ -0.04
TCOF1-202ENST00000377797 FBXW10Q5XX13 1052 aa14.81□□□□□ -0.04
TCOF1-202ENST00000377797 KIRREL3Q8IZU9 778 aa14.81□□□□□ -0.04
TCOF1-202ENST00000377797 MYH10P35580 1976 aa14.81□□□□□ -0.04
TCOF1-202ENST00000377797 CPA2P48052 419 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms