RNA–Protein interactions for RNA: ENST00000377199.3

TRIM27-202, Transcript of tripartite motif containing 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM27, Length 2,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-202ENST00000377199 GOLGA8OA6NCC3 632 aa16.65■□□□□ 0.26
TRIM27-202ENST00000377199 GOLGA8NF8WBI6 632 aa16.65■□□□□ 0.26
TRIM27-202ENST00000377199 NEMP1O14524 444 aa16.65■□□□□ 0.26
TRIM27-202ENST00000377199 RALBP11234 206 aa16.65■□□□□ 0.26
TRIM27-202ENST00000377199 ACADSBP45954 432 aa16.65■□□□□ 0.26
TRIM27-202ENST00000377199 PDK1Q15118 436 aa16.65■□□□□ 0.26
TRIM27-202ENST00000377199 KYAT3Q6YP21 454 aaKnown RBP16.65■□□□□ 0.26
TRIM27-202ENST00000377199 CRYBG2Q8N1P7 616 aa16.65■□□□□ 0.26
TRIM27-202ENST00000377199 ACVR1CQ8NER5 493 aa16.65■□□□□ 0.26
TRIM27-202ENST00000377199 DDIT4Q9NX09 232 aa16.65■□□□□ 0.26
TRIM27-202ENST00000377199 PPP1R12AO14974 1030 aaPredicted RBP16.65■□□□□ 0.26
TRIM27-202ENST00000377199 MAP3K7O43318 606 aa16.65■□□□□ 0.26
TRIM27-202ENST00000377199 OPHN1O60890 802 aa16.65■□□□□ 0.26
TRIM27-202ENST00000377199 PROCP04070 461 aa16.65■□□□□ 0.26
TRIM27-202ENST00000377199 SERPINA6P08185 405 aa16.65■□□□□ 0.26
TRIM27-202ENST00000377199 UBTFL6P0CB48 400 aaPredicted RBP16.65■□□□□ 0.26
TRIM27-202ENST00000377199 NPR3P17342 541 aa16.65■□□□□ 0.26
TRIM27-202ENST00000377199 GLRBP48167 497 aa16.65■□□□□ 0.26
TRIM27-202ENST00000377199 NUMBP49757 651 aa16.65■□□□□ 0.26
TRIM27-202ENST00000377199 TPI1P60174 286 aa16.65■□□□□ 0.26
TRIM27-202ENST00000377199 CFAP157Q5JU67 520 aa16.65■□□□□ 0.26
TRIM27-202ENST00000377199 C9orf131Q5VYM1 1079 aa16.65■□□□□ 0.26
TRIM27-202ENST00000377199 C4orf22Q6V702 233 aa16.65■□□□□ 0.26
TRIM27-202ENST00000377199 MARK2Q7KZI7 788 aaKnown RBP16.65■□□□□ 0.26
TRIM27-202ENST00000377199 GPRIN1Q7Z2K8 1008 aa16.65■□□□□ 0.26
TRIM27-202ENST00000377199 NPLOC4Q8TAT6 608 aa16.65■□□□□ 0.26
TRIM27-202ENST00000377199 TINF2Q9BSI4 451 aa16.65■□□□□ 0.26
TRIM27-202ENST00000377199 I6L893 689 aaPredicted RBP16.65■□□□□ 0.26
TRIM27-202ENST00000377199 ZBTB24O43167 697 aaPredicted RBP16.65■□□□□ 0.26
TRIM27-202ENST00000377199 DCXO43602 365 aa16.65■□□□□ 0.26
TRIM27-202ENST00000377199 CD4P01730 458 aa16.65■□□□□ 0.26
TRIM27-202ENST00000377199 GSTA2P09210 222 aa16.65■□□□□ 0.26
TRIM27-202ENST00000377199 PTPN1P18031 435 aaKnown RBP16.65■□□□□ 0.26
TRIM27-202ENST00000377199 AVPR1AP37288 418 aa16.65■□□□□ 0.26
TRIM27-202ENST00000377199 SNX17Q15036 470 aa16.65■□□□□ 0.26
TRIM27-202ENST00000377199 KIAA0319Q5VV43 1072 aa16.65■□□□□ 0.26
TRIM27-202ENST00000377199 CLEC20AQ6ZU45 233 aa16.65■□□□□ 0.26
TRIM27-202ENST00000377199 MAVSQ7Z434 540 aa16.65■□□□□ 0.26
TRIM27-202ENST00000377199 NPWQ8N729 165 aa16.65■□□□□ 0.26
TRIM27-202ENST00000377199 HSFY1Q96LI6 401 aa16.65■□□□□ 0.26
TRIM27-202ENST00000377199 DUSP16Q9BY84 665 aa16.65■□□□□ 0.26
TRIM27-202ENST00000377199 CHRAC1Q9NRG0 131 aa16.65■□□□□ 0.26
TRIM27-202ENST00000377199 VANGL2Q9ULK5 521 aa16.65■□□□□ 0.26
TRIM27-202ENST00000377199 PPM1HQ9ULR3 514 aa16.65■□□□□ 0.26
TRIM27-202ENST00000377199 STAP1Q9ULZ2 295 aa16.65■□□□□ 0.26
TRIM27-202ENST00000377199 IPPQ9Y573 584 aa16.65■□□□□ 0.26
TRIM27-202ENST00000377199 ZNF638Q14966 1978 aaKnown RBP16.64■□□□□ 0.26
TRIM27-202ENST00000377199 XPO1O14980 1071 aaKnown RBP16.64■□□□□ 0.25
TRIM27-202ENST00000377199 BIRC5O15392 142 aa16.64■□□□□ 0.25
TRIM27-202ENST00000377199 SIN3BO75182 1162 aa16.64■□□□□ 0.25
TRIM27-202ENST00000377199 SRGAP2BP0DMP2 458 aa16.64■□□□□ 0.25
TRIM27-202ENST00000377199 EPHX2P34913 555 aa16.64■□□□□ 0.25
TRIM27-202ENST00000377199 CCR10P46092 362 aa16.64■□□□□ 0.25
TRIM27-202ENST00000377199 TCHHL1Q5QJ38 904 aaPredicted RBP16.64■□□□□ 0.25
TRIM27-202ENST00000377199 RAPH1Q70E73 1250 aa16.64■□□□□ 0.25
TRIM27-202ENST00000377199 SHCBP1Q8NEM2 672 aa16.64■□□□□ 0.25
TRIM27-202ENST00000377199 RNF34Q969K3 372 aa16.64■□□□□ 0.25
TRIM27-202ENST00000377199 STX18Q9P2W9 335 aaKnown RBP16.64■□□□□ 0.25
TRIM27-202ENST00000377199 COPG2Q9UBF2 871 aa16.64■□□□□ 0.25
TRIM27-202ENST00000377199 NUP205Q92621 2012 aa16.64■□□□□ 0.25
TRIM27-202ENST00000377199 MAP3K13O43283 966 aa16.64■□□□□ 0.25
TRIM27-202ENST00000377199 TM7SF2O76062 418 aa16.64■□□□□ 0.25
TRIM27-202ENST00000377199 MYL3P08590 195 aa16.64■□□□□ 0.25
TRIM27-202ENST00000377199 LINGO3P0C6S8 592 aa16.64■□□□□ 0.25
TRIM27-202ENST00000377199 ACADSP16219 412 aa16.64■□□□□ 0.25
TRIM27-202ENST00000377199 NOS2P35228 1153 aa16.64■□□□□ 0.25
TRIM27-202ENST00000377199 CCNHP51946 323 aaPredicted RBP16.64■□□□□ 0.25
TRIM27-202ENST00000377199 CACNA2D1P54289 1103 aa16.64■□□□□ 0.25
TRIM27-202ENST00000377199 ALKAL1Q6UXT8 129 aa16.64■□□□□ 0.25
TRIM27-202ENST00000377199 ARCQ7LC44 396 aa16.64■□□□□ 0.25
TRIM27-202ENST00000377199 SLC26A7Q8TE54 656 aa16.64■□□□□ 0.25
TRIM27-202ENST00000377199 SH3TC2Q8TF17 1288 aa16.64■□□□□ 0.25
TRIM27-202ENST00000377199 WNT8BQ93098 351 aa16.64■□□□□ 0.25
TRIM27-202ENST00000377199 SIK2Q9H0K1 926 aa16.64■□□□□ 0.25
TRIM27-202ENST00000377199 DDX43Q9NXZ2 648 aaKnown RBP16.64■□□□□ 0.25
TRIM27-202ENST00000377199 DERAQ9Y315 318 aa16.64■□□□□ 0.25
TRIM27-202ENST00000377199 AP1G2O75843 785 aa16.63■□□□□ 0.25
TRIM27-202ENST00000377199 HSPA4LO95757 839 aa16.63■□□□□ 0.25
TRIM27-202ENST00000377199 SKIP12755 728 aa16.63■□□□□ 0.25
TRIM27-202ENST00000377199 CPA3P15088 417 aa16.63■□□□□ 0.25
TRIM27-202ENST00000377199 CD1EP15812 388 aa16.63■□□□□ 0.25
TRIM27-202ENST00000377199 SV2CQ496J9 727 aa16.63■□□□□ 0.25
TRIM27-202ENST00000377199 FSTL4Q6MZW2 842 aa16.63■□□□□ 0.25
TRIM27-202ENST00000377199 IZUMO2Q6UXV1 221 aa16.63■□□□□ 0.25
TRIM27-202ENST00000377199 PAQR9Q6ZVX9 377 aa16.63■□□□□ 0.25
TRIM27-202ENST00000377199 PHTF2Q8N3S3 785 aa16.63■□□□□ 0.25
TRIM27-202ENST00000377199 SPATA6LQ8N4H0 392 aa16.63■□□□□ 0.25
TRIM27-202ENST00000377199 ZNF781Q8N8C0 355 aa16.63■□□□□ 0.25
TRIM27-202ENST00000377199 LPPQ93052 612 aa16.63■□□□□ 0.25
TRIM27-202ENST00000377199 IARS2Q9NSE4 1012 aaKnown RBP16.63■□□□□ 0.25
TRIM27-202ENST00000377199 C20orf96Q9NUD7 363 aaPredicted RBP16.63■□□□□ 0.25
TRIM27-202ENST00000377199 DCDC2Q9UHG0 476 aa16.63■□□□□ 0.25
TRIM27-202ENST00000377199 HACD1B0YJ81 288 aa16.63■□□□□ 0.25
TRIM27-202ENST00000377199 ALDH1A2O94788 518 aa16.63■□□□□ 0.25
TRIM27-202ENST00000377199 SERPINE1P05121 402 aa16.63■□□□□ 0.25
TRIM27-202ENST00000377199 ZCCHC18P0CG32 403 aa16.63■□□□□ 0.25
TRIM27-202ENST00000377199 PTPN3P26045 913 aa16.63■□□□□ 0.25
TRIM27-202ENST00000377199 GP5P40197 560 aa16.63■□□□□ 0.25
TRIM27-202ENST00000377199 CUL3Q13618 768 aa16.63■□□□□ 0.25
TRIM27-202ENST00000377199 SORT1Q99523 831 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms