RNA–Protein interactions for RNA: ENST00000376491.7

CLCN6-204, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 927 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-204ENST00000376491 CYTH4Q9UIA0 394 aa15.47■□□□□ 0.07
CLCN6-204ENST00000376491 SLCO3A1Q9UIG8 710 aa15.47■□□□□ 0.07
CLCN6-204ENST00000376491 SCML1Q9UN30 329 aa15.47■□□□□ 0.07
CLCN6-204ENST00000376491 NCKAP1Q9Y2A7 1128 aa15.47■□□□□ 0.07
CLCN6-204ENST00000376491 TYW5A2RUC4 315 aaKnown RBP15.46■□□□□ 0.07
CLCN6-204ENST00000376491 IGLV3-25P01717 112 aa15.46■□□□□ 0.07
CLCN6-204ENST00000376491 WNT1P04628 370 aa15.46■□□□□ 0.07
CLCN6-204ENST00000376491 SRPRAP08240 638 aaKnown RBP15.46■□□□□ 0.07
CLCN6-204ENST00000376491 STX17P56962 302 aa15.46■□□□□ 0.07
CLCN6-204ENST00000376491 RACK1P63244 317 aaKnown RBP15.46■□□□□ 0.07
CLCN6-204ENST00000376491 IL9RQ01113 521 aa15.46■□□□□ 0.07
CLCN6-204ENST00000376491 EIF4EBP2Q13542 120 aaPredicted RBP15.46■□□□□ 0.07
CLCN6-204ENST00000376491 KCNJ12Q14500 433 aa15.46■□□□□ 0.07
CLCN6-204ENST00000376491 ZC3H12AQ5D1E8 599 aaKnown RBP15.46■□□□□ 0.07
CLCN6-204ENST00000376491 PRAMEF14Q5SWL7 426 aa15.46■□□□□ 0.07
CLCN6-204ENST00000376491 RAP1GAP2Q684P5 730 aa15.46■□□□□ 0.07
CLCN6-204ENST00000376491 NCEH1Q6PIU2 408 aa15.46■□□□□ 0.07
CLCN6-204ENST00000376491 FOXR2Q6PJQ5 311 aa15.46■□□□□ 0.07
CLCN6-204ENST00000376491 BEND5Q7L4P6 421 aa15.46■□□□□ 0.07
CLCN6-204ENST00000376491 LGI2Q8N0V4 545 aa15.46■□□□□ 0.07
CLCN6-204ENST00000376491 KDM1BQ8NB78 822 aa15.46■□□□□ 0.07
CLCN6-204ENST00000376491 FAM129BQ96TA1 746 aa15.46■□□□□ 0.07
CLCN6-204ENST00000376491 ACP6Q9NPH0 428 aa15.46■□□□□ 0.07
CLCN6-204ENST00000376491 TJP2Q9UDY2 1190 aa15.46■□□□□ 0.07
CLCN6-204ENST00000376491 HOOK1Q9UJC3 728 aaKnown RBP15.46■□□□□ 0.07
CLCN6-204ENST00000376491 CTNND2Q9UQB3 1225 aa15.46■□□□□ 0.07
CLCN6-204ENST00000376491 ARID1BQ8NFD5 2236 aaPredicted RBP15.45■□□□□ 0.06
CLCN6-204ENST00000376491 ITIH6Q6UXX5 1313 aa15.45■□□□□ 0.06
CLCN6-204ENST00000376491 BAHCC1Q9P281 2608 aa15.45■□□□□ 0.06
CLCN6-204ENST00000376491 TARSL2A2RTX5 802 aaKnown RBP15.45■□□□□ 0.06
CLCN6-204ENST00000376491 E5RJQ4 531 aa15.45■□□□□ 0.06
CLCN6-204ENST00000376491 WNT9AO14904 365 aa15.45■□□□□ 0.06
CLCN6-204ENST00000376491 VILLO15195 856 aa15.45■□□□□ 0.06
CLCN6-204ENST00000376491 SART1O43290 800 aaKnown RBP15.45■□□□□ 0.06
CLCN6-204ENST00000376491 TNFSF14O43557 240 aa15.45■□□□□ 0.06
CLCN6-204ENST00000376491 KRT5P13647 590 aa15.45■□□□□ 0.06
CLCN6-204ENST00000376491 TACR2P21452 398 aa15.45■□□□□ 0.06
CLCN6-204ENST00000376491 SLC8A1P32418 973 aa15.45■□□□□ 0.06
CLCN6-204ENST00000376491 PPP1R2P41236 205 aa15.45■□□□□ 0.06
CLCN6-204ENST00000376491 GRK6P43250 576 aa15.45■□□□□ 0.06
CLCN6-204ENST00000376491 ACADSBP45954 432 aa15.45■□□□□ 0.06
CLCN6-204ENST00000376491 NUMBP49757 651 aa15.45■□□□□ 0.06
CLCN6-204ENST00000376491 MARSP56192 900 aaKnown RBP15.45■□□□□ 0.06
CLCN6-204ENST00000376491 MORC3Q14149 939 aa15.45■□□□□ 0.06
CLCN6-204ENST00000376491 ADAT2Q7Z6V5 191 aaKnown RBP15.45■□□□□ 0.06
CLCN6-204ENST00000376491 TMEM110Q86TL2 294 aa15.45■□□□□ 0.06
CLCN6-204ENST00000376491 STK40Q8N2I9 435 aa15.45■□□□□ 0.06
CLCN6-204ENST00000376491 AADATQ8N5Z0 425 aa15.45■□□□□ 0.06
CLCN6-204ENST00000376491 STK32AQ8WU08 396 aa15.45■□□□□ 0.06
CLCN6-204ENST00000376491 ZNF606Q8WXB4 792 aa15.45■□□□□ 0.06
CLCN6-204ENST00000376491 PTPRN2Q92932 1015 aa15.45■□□□□ 0.06
CLCN6-204ENST00000376491 RPL10LQ96L21 214 aaKnown RBP15.45■□□□□ 0.06
CLCN6-204ENST00000376491 INTS2Q9H0H0 1204 aaKnown RBP15.45■□□□□ 0.06
CLCN6-204ENST00000376491 ADAMTS1Q9UHI8 967 aa15.45■□□□□ 0.06
CLCN6-204ENST00000376491 A0A1B0GTQ1 180 aa15.44■□□□□ 0.06
CLCN6-204ENST00000376491 EDDM13A0A1B0GTR0 161 aa15.44■□□□□ 0.06
CLCN6-204ENST00000376491 BICDL2A1A5D9 508 aa15.44■□□□□ 0.06
CLCN6-204ENST00000376491 FAM149AA5PLN7 773 aa15.44■□□□□ 0.06
CLCN6-204ENST00000376491 CAPN9O14815 690 aa15.44■□□□□ 0.06
CLCN6-204ENST00000376491 RNASEH1O60930 286 aaKnown RBP15.44■□□□□ 0.06
CLCN6-204ENST00000376491 TRUB2O95900 331 aaKnown RBP15.44■□□□□ 0.06
CLCN6-204ENST00000376491 AFPP02771 609 aaKnown RBP15.44■□□□□ 0.06
CLCN6-204ENST00000376491 VAV1P15498 845 aa15.44■□□□□ 0.06
CLCN6-204ENST00000376491 STK19P49842 368 aaPredicted RBP15.44■□□□□ 0.06
CLCN6-204ENST00000376491 ECT2LQ008S8 904 aa15.44■□□□□ 0.06
CLCN6-204ENST00000376491 CAMK2BQ13554 666 aa15.44■□□□□ 0.06
CLCN6-204ENST00000376491 SHBQ15464 509 aa15.44■□□□□ 0.06
CLCN6-204ENST00000376491 CHSY1Q86X52 802 aa15.44■□□□□ 0.06
CLCN6-204ENST00000376491 GATAD2AQ86YP4 633 aa15.44■□□□□ 0.06
CLCN6-204ENST00000376491 OR2T34Q8NGX1 318 aa15.44■□□□□ 0.06
CLCN6-204ENST00000376491 PRMT1Q99873 361 aaKnown RBP15.44■□□□□ 0.06
CLCN6-204ENST00000376491 OMDQ99983 421 aa15.44■□□□□ 0.06
CLCN6-204ENST00000376491 SRRTQ9BXP5 876 aaKnown RBP15.44■□□□□ 0.06
CLCN6-204ENST00000376491 ACE2Q9BYF1 805 aaPredicted RBP15.44■□□□□ 0.06
CLCN6-204ENST00000376491 POPDC2Q9HBU9 364 aa15.44■□□□□ 0.06
CLCN6-204ENST00000376491 UBE2TQ9NPD8 197 aaPredicted RBP15.44■□□□□ 0.06
CLCN6-204ENST00000376491 FZD4Q9ULV1 537 aa15.44■□□□□ 0.06
CLCN6-204ENST00000376491 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.44■□□□□ 0.06
CLCN6-204ENST00000376491 COL5A1P20908 1838 aaPredicted RBP15.44■□□□□ 0.06
CLCN6-204ENST00000376491 CELSR3Q9NYQ7 3312 aa15.44■□□□□ 0.06
CLCN6-204ENST00000376491 A0A1W2PR77 199 aa15.43■□□□□ 0.06
CLCN6-204ENST00000376491 BIN1O00499 593 aa15.43■□□□□ 0.06
CLCN6-204ENST00000376491 RNASEH2AO75792 299 aaKnown RBP15.43■□□□□ 0.06
CLCN6-204ENST00000376491 LETM1O95202 739 aaPredicted RBP15.43■□□□□ 0.06
CLCN6-204ENST00000376491 MOCS3O95396 460 aa15.43■□□□□ 0.06
CLCN6-204ENST00000376491 APOEP02649 317 aa15.43■□□□□ 0.06
CLCN6-204ENST00000376491 MZF1P28698 734 aaPredicted RBP15.43■□□□□ 0.06
CLCN6-204ENST00000376491 PSMD8P48556 350 aa15.43■□□□□ 0.06
CLCN6-204ENST00000376491 C21orf59P57076 290 aa15.43■□□□□ 0.06
CLCN6-204ENST00000376491 NUCB2P80303 420 aa15.43■□□□□ 0.06
CLCN6-204ENST00000376491 TAF5Q15542 800 aa15.43■□□□□ 0.06
CLCN6-204ENST00000376491 MEA1Q16626 185 aa15.43■□□□□ 0.06
CLCN6-204ENST00000376491 COL28A1Q2UY09 1125 aa15.43■□□□□ 0.06
CLCN6-204ENST00000376491 GJB7Q6PEY0 223 aa15.43■□□□□ 0.06
CLCN6-204ENST00000376491 DHRS13Q6UX07 377 aa15.43■□□□□ 0.06
CLCN6-204ENST00000376491 CCDC117Q8IWD4 279 aaPredicted RBP15.43■□□□□ 0.06
CLCN6-204ENST00000376491 BTN2A3PQ96KV6 586 aa15.43■□□□□ 0.06
CLCN6-204ENST00000376491 ELF4Q99607 663 aaPredicted RBP15.43■□□□□ 0.06
CLCN6-204ENST00000376491 THAP9Q9H5L6 903 aa15.43■□□□□ 0.06
CLCN6-204ENST00000376491 DKK4Q9UBT3 224 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms