RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 CYTH1Q15438 398 aa11.78□□□□□ -0.52
TM9SF2-201ENST00000376387 FAM47CQ5HY64 1035 aa11.78□□□□□ -0.52
TM9SF2-201ENST00000376387 SH3D19Q5HYK7 790 aa11.78□□□□□ -0.52
TM9SF2-201ENST00000376387 SNX32Q86XE0 403 aa11.78□□□□□ -0.52
TM9SF2-201ENST00000376387 TICAM1Q8IUC6 712 aa11.78□□□□□ -0.52
TM9SF2-201ENST00000376387 SAMD14Q8IZD0 417 aaPredicted RBP11.78□□□□□ -0.52
TM9SF2-201ENST00000376387 NELL1Q92832 810 aa11.78□□□□□ -0.52
TM9SF2-201ENST00000376387 MARK4Q96L34 752 aa11.78□□□□□ -0.52
TM9SF2-201ENST00000376387 KLHL32Q96NJ5 620 aa11.78□□□□□ -0.52
TM9SF2-201ENST00000376387 SIKE1Q9BRV8 207 aa11.78□□□□□ -0.52
TM9SF2-201ENST00000376387 CEP41Q9BYV8 373 aa11.78□□□□□ -0.52
TM9SF2-201ENST00000376387 PCDH18Q9HCL0 1135 aa11.78□□□□□ -0.52
TM9SF2-201ENST00000376387 RNF146Q9NTX7 359 aa11.78□□□□□ -0.52
TM9SF2-201ENST00000376387 MTMR10Q9NXD2 777 aa11.78□□□□□ -0.52
TM9SF2-201ENST00000376387 C6orf203Q9P0P8 240 aaPredicted RBP11.78□□□□□ -0.52
TM9SF2-201ENST00000376387 FZD1Q9UP38 647 aa11.78□□□□□ -0.52
TM9SF2-201ENST00000376387 DMTF1Q9Y222 760 aa11.78□□□□□ -0.52
TM9SF2-201ENST00000376387 HES2Q9Y543 173 aa11.78□□□□□ -0.52
TM9SF2-201ENST00000376387 PRPSAP2O60256 369 aa11.77□□□□□ -0.52
TM9SF2-201ENST00000376387 GLRA3O75311 464 aa11.77□□□□□ -0.52
TM9SF2-201ENST00000376387 MAGEA6P43360 314 aa11.77□□□□□ -0.52
TM9SF2-201ENST00000376387 SERPINB9P50453 376 aa11.77□□□□□ -0.52
TM9SF2-201ENST00000376387 ATXN1P54253 815 aaKnown RBP11.77□□□□□ -0.52
TM9SF2-201ENST00000376387 RPL26P61254 145 aaKnown RBP11.77□□□□□ -0.52
TM9SF2-201ENST00000376387 OLIG2Q13516 323 aa11.77□□□□□ -0.52
TM9SF2-201ENST00000376387 EPGNQ6UW88 154 aa11.77□□□□□ -0.52
TM9SF2-201ENST00000376387 FAM183BPQ6ZVS7 135 aa11.77□□□□□ -0.52
TM9SF2-201ENST00000376387 PTAR1Q7Z6K3 402 aaPredicted RBP11.77□□□□□ -0.52
TM9SF2-201ENST00000376387 BHLHE22Q8NFJ8 381 aaPredicted RBP11.77□□□□□ -0.52
TM9SF2-201ENST00000376387 KBTBD7Q8WVZ9 684 aa11.77□□□□□ -0.52
TM9SF2-201ENST00000376387 GPRASP2Q96D09 838 aa11.77□□□□□ -0.52
TM9SF2-201ENST00000376387 KCNK16Q96T55 309 aa11.77□□□□□ -0.52
TM9SF2-201ENST00000376387 STN1Q9H668 368 aaKnown RBP11.77□□□□□ -0.52
TM9SF2-201ENST00000376387 ZNF696Q9H7X3 374 aa11.77□□□□□ -0.52
TM9SF2-201ENST00000376387 NGRNQ9NPE2 291 aaKnown RBP11.77□□□□□ -0.52
TM9SF2-201ENST00000376387 C2CD4BA6NLJ0 364 aa11.77□□□□□ -0.53
TM9SF2-201ENST00000376387 SUPT20HL2P0C7V6 817 aa11.77□□□□□ -0.53
TM9SF2-201ENST00000376387 ERVK-10P10266 1014 aa11.77□□□□□ -0.53
TM9SF2-201ENST00000376387 PTPN1P18031 435 aaKnown RBP11.77□□□□□ -0.53
TM9SF2-201ENST00000376387 TCN1P20061 433 aaPredicted RBP11.77□□□□□ -0.53
TM9SF2-201ENST00000376387 CYP3A5P20815 502 aa11.77□□□□□ -0.53
TM9SF2-201ENST00000376387 RPL10P27635 214 aaKnown RBP11.77□□□□□ -0.53
TM9SF2-201ENST00000376387 EPHA3P29320 983 aa11.77□□□□□ -0.53
TM9SF2-201ENST00000376387 GPD2P43304 727 aa11.77□□□□□ -0.53
TM9SF2-201ENST00000376387 HARS2P49590 506 aaKnown RBP11.77□□□□□ -0.53
TM9SF2-201ENST00000376387 RGS7P49802 495 aa11.77□□□□□ -0.53
TM9SF2-201ENST00000376387 NIPAL4Q0D2K0 466 aa11.77□□□□□ -0.53
TM9SF2-201ENST00000376387 CBLBQ13191 982 aa11.77□□□□□ -0.53
TM9SF2-201ENST00000376387 CEACAM7Q14002 265 aa11.77□□□□□ -0.53
TM9SF2-201ENST00000376387 FLOT2Q14254 428 aa11.77□□□□□ -0.53
TM9SF2-201ENST00000376387 STILQ15468 1287 aa11.77□□□□□ -0.53
TM9SF2-201ENST00000376387 NRF1Q16656 503 aa11.77□□□□□ -0.53
TM9SF2-201ENST00000376387 ZNF423Q2M1K9 1284 aa11.77□□□□□ -0.53
TM9SF2-201ENST00000376387 SUPT20HL1Q3ZLR7 823 aa11.77□□□□□ -0.53
TM9SF2-201ENST00000376387 CCDC14Q49A88 953 aa11.77□□□□□ -0.53
TM9SF2-201ENST00000376387 OR6B2Q6IFH4 312 aa11.77□□□□□ -0.53
TM9SF2-201ENST00000376387 KLC3Q6P597 504 aa11.77□□□□□ -0.53
TM9SF2-201ENST00000376387 DSELQ8IZU8 1212 aa11.77□□□□□ -0.53
TM9SF2-201ENST00000376387 APBB2Q92870 758 aa11.77□□□□□ -0.53
TM9SF2-201ENST00000376387 ATG4CQ96DT6 458 aa11.77□□□□□ -0.53
TM9SF2-201ENST00000376387 ACO2Q99798 780 aaKnown RBP11.77□□□□□ -0.53
TM9SF2-201ENST00000376387 RTKNQ9BST9 563 aa11.77□□□□□ -0.53
TM9SF2-201ENST00000376387 STK39Q9UEW8 545 aa11.77□□□□□ -0.53
TM9SF2-201ENST00000376387 RAB26Q9ULW5 256 aa11.77□□□□□ -0.53
TM9SF2-201ENST00000376387 BCLAF3A2AJT9 711 aaKnown RBP11.77□□□□□ -0.53
TM9SF2-201ENST00000376387 TBC1D12O60347 775 aa11.77□□□□□ -0.53
TM9SF2-201ENST00000376387 TRMUO75648 421 aaKnown RBP11.77□□□□□ -0.53
TM9SF2-201ENST00000376387 TNFAIP8O95379 198 aa11.77□□□□□ -0.53
TM9SF2-201ENST00000376387 CDH2P19022 906 aaPredicted RBP11.77□□□□□ -0.53
TM9SF2-201ENST00000376387 TMEM198Q66K66 360 aa11.77□□□□□ -0.53
TM9SF2-201ENST00000376387 AHI1Q8N157 1196 aa11.77□□□□□ -0.53
TM9SF2-201ENST00000376387 MCUQ8NE86 351 aa11.77□□□□□ -0.53
TM9SF2-201ENST00000376387 CATSPER2Q96P56 530 aa11.77□□□□□ -0.53
TM9SF2-201ENST00000376387 GMEB1Q9Y692 573 aa11.77□□□□□ -0.53
TM9SF2-201ENST00000376387 STRNO43815 780 aa11.76□□□□□ -0.53
TM9SF2-201ENST00000376387 MSCO60682 206 aa11.76□□□□□ -0.53
TM9SF2-201ENST00000376387 CHRNGP07510 517 aa11.76□□□□□ -0.53
TM9SF2-201ENST00000376387 FAM58BPP0C7Q3 252 aa11.76□□□□□ -0.53
TM9SF2-201ENST00000376387 CCDC166P0CW27 439 aa11.76□□□□□ -0.53
TM9SF2-201ENST00000376387 MGAT1P26572 445 aa11.76□□□□□ -0.53
TM9SF2-201ENST00000376387 PIK3R1P27986 724 aa11.76□□□□□ -0.53
TM9SF2-201ENST00000376387 CHRNA5P30532 468 aa11.76□□□□□ -0.53
TM9SF2-201ENST00000376387 STT3AP46977 705 aa11.76□□□□□ -0.53
TM9SF2-201ENST00000376387 COG7P83436 770 aa11.76□□□□□ -0.53
TM9SF2-201ENST00000376387 IRF9Q00978 393 aa11.76□□□□□ -0.53
TM9SF2-201ENST00000376387 RARS2Q5T160 578 aaKnown RBP11.76□□□□□ -0.53
TM9SF2-201ENST00000376387 MAP1SQ66K74 1059 aaPredicted RBP11.76□□□□□ -0.53
TM9SF2-201ENST00000376387 KLHL35Q6PF15 583 aa11.76□□□□□ -0.53
TM9SF2-201ENST00000376387 MAP7D3Q8IWC1 876 aa11.76□□□□□ -0.53
TM9SF2-201ENST00000376387 ZSCAN18Q8TBC5 510 aaPredicted RBP11.76□□□□□ -0.53
TM9SF2-201ENST00000376387 AKT1S1Q96B36 256 aa11.76□□□□□ -0.53
TM9SF2-201ENST00000376387 RCN3Q96D15 328 aa11.76□□□□□ -0.53
TM9SF2-201ENST00000376387 CNPY3Q9BT09 278 aa11.76□□□□□ -0.53
TM9SF2-201ENST00000376387 SNRNP25Q9BV90 132 aaKnown RBP11.76□□□□□ -0.53
TM9SF2-201ENST00000376387 SEMA6AQ9H2E6 1030 aa11.76□□□□□ -0.53
TM9SF2-201ENST00000376387 CCDC68Q9H2F9 335 aa11.76□□□□□ -0.53
TM9SF2-201ENST00000376387 NOP56O00567 594 aaKnown RBP11.76□□□□□ -0.53
TM9SF2-201ENST00000376387 WDR46O15213 610 aaKnown RBP11.76□□□□□ -0.53
TM9SF2-201ENST00000376387 KATNA1O75449 491 aa11.76□□□□□ -0.53
TM9SF2-201ENST00000376387 LTFP02788 710 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms