RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 ADGRF2Q8IZF7 708 aa13.25□□□□□ -0.29
MSH5-204ENST00000375755 BBS5Q8N3I7 341 aa13.25□□□□□ -0.29
MSH5-204ENST00000375755 PPP1R14CQ8TAE6 165 aa13.25□□□□□ -0.29
MSH5-204ENST00000375755 CCDC97Q96F63 343 aaPredicted RBP13.25□□□□□ -0.29
MSH5-204ENST00000375755 NRDE2Q9H7Z3 1164 aa13.25□□□□□ -0.29
MSH5-204ENST00000375755 TSPAN1O60635 241 aa13.25□□□□□ -0.29
MSH5-204ENST00000375755 TRPA1O75762 1119 aa13.25□□□□□ -0.29
MSH5-204ENST00000375755 FAM58BPP0C7Q3 252 aa13.25□□□□□ -0.29
MSH5-204ENST00000375755 RBP3P10745 1247 aa13.25□□□□□ -0.29
MSH5-204ENST00000375755 EIF4BP23588 611 aaKnown RBP13.25□□□□□ -0.29
MSH5-204ENST00000375755 RPL10AP62906 217 aaKnown RBP13.25□□□□□ -0.29
MSH5-204ENST00000375755 YWHAZP63104 245 aaKnown RBP13.25□□□□□ -0.29
MSH5-204ENST00000375755 KCNJ11Q14654 390 aa13.25□□□□□ -0.29
MSH5-204ENST00000375755 DGKDQ16760 1214 aa13.25□□□□□ -0.29
MSH5-204ENST00000375755 ZNF699Q32M78 642 aa13.25□□□□□ -0.29
MSH5-204ENST00000375755 FASTKD1Q53R41 847 aaKnown RBP13.25□□□□□ -0.29
MSH5-204ENST00000375755 MROH9Q5TGP6 573 aa13.25□□□□□ -0.29
MSH5-204ENST00000375755 VWA5B1Q5TIE3 1220 aa13.25□□□□□ -0.29
MSH5-204ENST00000375755 C16orf46Q6P387 395 aa13.25□□□□□ -0.29
MSH5-204ENST00000375755 POLNQ7Z5Q5 900 aa13.25□□□□□ -0.29
MSH5-204ENST00000375755 DDI1Q8WTU0 396 aa13.25□□□□□ -0.29
MSH5-204ENST00000375755 RPF1Q9H9Y2 349 aaKnown RBP13.25□□□□□ -0.29
MSH5-204ENST00000375755 PNPOQ9NVS9 261 aa13.25□□□□□ -0.29
MSH5-204ENST00000375755 PAIP2BQ9ULR5 123 aaKnown RBP13.25□□□□□ -0.29
MSH5-204ENST00000375755 GNEQ9Y223 722 aaKnown RBP13.25□□□□□ -0.29
MSH5-204ENST00000375755 CRHR1P34998 444 aa13.24□□□□□ -0.29
MSH5-204ENST00000375755 PIGHQ14442 188 aaPredicted RBP13.24□□□□□ -0.29
MSH5-204ENST00000375755 MBLAC2Q68D91 279 aa13.24□□□□□ -0.29
MSH5-204ENST00000375755 PDPK2PQ6A1A2 396 aa13.24□□□□□ -0.29
MSH5-204ENST00000375755 ARCQ7LC44 396 aa13.24□□□□□ -0.29
MSH5-204ENST00000375755 TICAM1Q8IUC6 712 aa13.24□□□□□ -0.29
MSH5-204ENST00000375755 ARFGAP1Q8N6T3 406 aa13.24□□□□□ -0.29
MSH5-204ENST00000375755 SMYD1Q8NB12 490 aa13.24□□□□□ -0.29
MSH5-204ENST00000375755 TMIGD2Q96BF3 282 aa13.24□□□□□ -0.29
MSH5-204ENST00000375755 TWNKQ96RR1 684 aa13.24□□□□□ -0.29
MSH5-204ENST00000375755 OSMRQ99650 979 aa13.24□□□□□ -0.29
MSH5-204ENST00000375755 TRIM56Q9BRZ2 755 aaKnown RBP13.24□□□□□ -0.29
MSH5-204ENST00000375755 ZNF865P0CJ78 1059 aaPredicted RBP13.24□□□□□ -0.29
MSH5-204ENST00000375755 NCF2P19878 526 aaPredicted RBP13.24□□□□□ -0.29
MSH5-204ENST00000375755 STT3AP46977 705 aa13.24□□□□□ -0.29
MSH5-204ENST00000375755 ZNF132P52740 706 aa13.24□□□□□ -0.29
MSH5-204ENST00000375755 SLC25A11Q02978 314 aaKnown RBP13.24□□□□□ -0.29
MSH5-204ENST00000375755 MAP2K5Q13163 448 aa13.24□□□□□ -0.29
MSH5-204ENST00000375755 PDK1Q15118 436 aa13.24□□□□□ -0.29
MSH5-204ENST00000375755 CYP4A22Q5TCH4 519 aa13.24□□□□□ -0.29
MSH5-204ENST00000375755 DNAJC14Q6Y2X3 702 aaPredicted RBP13.24□□□□□ -0.29
MSH5-204ENST00000375755 Q6ZNX1 250 aa13.24□□□□□ -0.29
MSH5-204ENST00000375755 SAPCD2Q86UD0 394 aa13.24□□□□□ -0.29
MSH5-204ENST00000375755 WDTC1Q8N5D0 677 aa13.24□□□□□ -0.29
MSH5-204ENST00000375755 CMTM5Q96DZ9 223 aa13.24□□□□□ -0.29
MSH5-204ENST00000375755 ARHGAP39Q9C0H5 1083 aa13.24□□□□□ -0.29
MSH5-204ENST00000375755 PRMT7Q9NVM4 692 aaPredicted RBP13.24□□□□□ -0.29
MSH5-204ENST00000375755 TBCCD1Q9NVR7 557 aa13.24□□□□□ -0.29
MSH5-204ENST00000375755 ZC3H7BQ9UGR2 993 aaKnown RBP13.24□□□□□ -0.29
MSH5-204ENST00000375755 CITO14578 2027 aa13.24□□□□□ -0.29
MSH5-204ENST00000375755 SLC15A5A6NIM6 579 aa13.24□□□□□ -0.29
MSH5-204ENST00000375755 SMIM10L2AP0DMW4 78 aa13.24□□□□□ -0.29
MSH5-204ENST00000375755 SMIM10L2BP0DMW5 78 aa13.24□□□□□ -0.29
MSH5-204ENST00000375755 FGF3P11487 239 aaPredicted RBP13.24□□□□□ -0.29
MSH5-204ENST00000375755 SLC1A6P48664 564 aa13.24□□□□□ -0.29
MSH5-204ENST00000375755 ADGRE1Q14246 886 aa13.24□□□□□ -0.29
MSH5-204ENST00000375755 RARS2Q5T160 578 aaKnown RBP13.24□□□□□ -0.29
MSH5-204ENST00000375755 LGSNQ5TDP6 509 aa13.24□□□□□ -0.29
MSH5-204ENST00000375755 TLK2Q86UE8 772 aa13.24□□□□□ -0.29
MSH5-204ENST00000375755 EXOC8Q8IYI6 725 aa13.24□□□□□ -0.29
MSH5-204ENST00000375755 GALNT4Q8N4A0 578 aa13.24□□□□□ -0.29
MSH5-204ENST00000375755 CXorf38Q8TB03 319 aa13.24□□□□□ -0.29
MSH5-204ENST00000375755 SLC35B4Q969S0 331 aa13.24□□□□□ -0.29
MSH5-204ENST00000375755 EIF2AQ9BY44 585 aaKnown RBP13.24□□□□□ -0.29
MSH5-204ENST00000375755 IMPG2Q9BZV3 1241 aa13.24□□□□□ -0.29
MSH5-204ENST00000375755 POPDC2Q9HBU9 364 aa13.24□□□□□ -0.29
MSH5-204ENST00000375755 RIMS3Q9UJD0 308 aa13.24□□□□□ -0.29
MSH5-204ENST00000375755 FAF1Q9UNN5 650 aaPredicted RBP13.24□□□□□ -0.29
MSH5-204ENST00000375755 SCN1AP35498 2009 aa13.23□□□□□ -0.29
MSH5-204ENST00000375755 B4GALT4O60513 344 aa13.23□□□□□ -0.29
MSH5-204ENST00000375755 CD1EP15812 388 aa13.23□□□□□ -0.29
MSH5-204ENST00000375755 KDELR1P24390 212 aa13.23□□□□□ -0.29
MSH5-204ENST00000375755 PRKCHP24723 683 aa13.23□□□□□ -0.29
MSH5-204ENST00000375755 PHEXP78562 749 aa13.23□□□□□ -0.29
MSH5-204ENST00000375755 MRPS22P82650 360 aaKnown RBP13.23□□□□□ -0.29
MSH5-204ENST00000375755 CREB5Q02930 508 aa13.23□□□□□ -0.29
MSH5-204ENST00000375755 NPNTQ6UXI9 565 aa13.23□□□□□ -0.29
MSH5-204ENST00000375755 RFX6Q8HWS3 928 aa13.23□□□□□ -0.29
MSH5-204ENST00000375755 ERI1Q8IV48 349 aaKnown RBP13.23□□□□□ -0.29
MSH5-204ENST00000375755 LILRA2Q8N149 483 aa13.23□□□□□ -0.29
MSH5-204ENST00000375755 TMEM40Q8WWA1 233 aa13.23□□□□□ -0.29
MSH5-204ENST00000375755 GFM2Q969S9 779 aaKnown RBP13.23□□□□□ -0.29
MSH5-204ENST00000375755 FAF2Q96CS3 445 aa13.23□□□□□ -0.29
MSH5-204ENST00000375755 LRGUKQ96M69 825 aa13.23□□□□□ -0.29
MSH5-204ENST00000375755 SLX1AQ9BQ83 275 aa13.23□□□□□ -0.29
MSH5-204ENST00000375755 FRMD8P1Q9BZ68 369 aaPredicted RBP13.23□□□□□ -0.29
MSH5-204ENST00000375755 NIF3L1Q9GZT8 377 aa13.23□□□□□ -0.29
MSH5-204ENST00000375755 THEGQ9P2T0 379 aa13.23□□□□□ -0.29
MSH5-204ENST00000375755 RSL24D1Q9UHA3 163 aaKnown RBP13.23□□□□□ -0.29
MSH5-204ENST00000375755 CNTN6Q9UQ52 1028 aa13.23□□□□□ -0.29
MSH5-204ENST00000375755 EFR3BQ9Y2G0 817 aa13.23□□□□□ -0.29
MSH5-204ENST00000375755 MYADML2A6NDP7 307 aa13.23□□□□□ -0.29
MSH5-204ENST00000375755 PPEF2O14830 753 aa13.23□□□□□ -0.29
MSH5-204ENST00000375755 CALB1P05937 261 aa13.23□□□□□ -0.29
MSH5-204ENST00000375755 COX4I1P13073 169 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms