RNA–Protein interactions for RNA: ENST00000375597.8

MCF2L-202, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-202ENST00000375597 FAM83AQ86UY5 434 aa12.08□□□□□ -0.48
MCF2L-202ENST00000375597 SPATA22Q8NHS9 363 aa12.08□□□□□ -0.48
MCF2L-202ENST00000375597 CSPG4P5Q96PW8 444 aa12.08□□□□□ -0.48
MCF2L-202ENST00000375597 RHOBTB2Q9BYZ6 727 aa12.08□□□□□ -0.48
MCF2L-202ENST00000375597 SNX25Q9H3E2 840 aa12.08□□□□□ -0.48
MCF2L-202ENST00000375597 PLAC1Q9HBJ0 212 aa12.08□□□□□ -0.48
MCF2L-202ENST00000375597 LRRC4Q9HBW1 653 aa12.08□□□□□ -0.48
MCF2L-202ENST00000375597 SETD4Q9NVD3 440 aa12.08□□□□□ -0.48
MCF2L-202ENST00000375597 TCRBV5S1A1TA0A578 114 aa12.07□□□□□ -0.48
MCF2L-202ENST00000375597 PMM2O15305 246 aa12.07□□□□□ -0.48
MCF2L-202ENST00000375597 PLIN3O60664 434 aa12.07□□□□□ -0.48
MCF2L-202ENST00000375597 CLPTM1O96005 669 aa12.07□□□□□ -0.48
MCF2L-202ENST00000375597 SERPINA6P08185 405 aa12.07□□□□□ -0.48
MCF2L-202ENST00000375597 CHRM1P11229 460 aaPredicted RBP12.07□□□□□ -0.48
MCF2L-202ENST00000375597 ITGAXP20702 1163 aa12.07□□□□□ -0.48
MCF2L-202ENST00000375597 MAP3K7CLP57077 242 aa12.07□□□□□ -0.48
MCF2L-202ENST00000375597 SLC18A2Q05940 514 aa12.07□□□□□ -0.48
MCF2L-202ENST00000375597 FAM47CQ5HY64 1035 aa12.07□□□□□ -0.48
MCF2L-202ENST00000375597 MARK2Q7KZI7 788 aaKnown RBP12.07□□□□□ -0.48
MCF2L-202ENST00000375597 NET1Q7Z628 596 aaPredicted RBP12.07□□□□□ -0.48
MCF2L-202ENST00000375597 RELL1Q8IUW5 271 aa12.07□□□□□ -0.48
MCF2L-202ENST00000375597 SLC41A1Q8IVJ1 513 aa12.07□□□□□ -0.48
MCF2L-202ENST00000375597 MYO1HQ8N1T3 1032 aa12.07□□□□□ -0.48
MCF2L-202ENST00000375597 RUVBL2Q9Y230 463 aaKnown RBP12.07□□□□□ -0.48
MCF2L-202ENST00000375597 ADGRA2Q96PE1 1338 aa12.07□□□□□ -0.48
MCF2L-202ENST00000375597 ACKR2O00590 384 aa12.07□□□□□ -0.48
MCF2L-202ENST00000375597 CHADO15335 359 aa12.07□□□□□ -0.48
MCF2L-202ENST00000375597 MAFO75444 373 aaPredicted RBP12.07□□□□□ -0.48
MCF2L-202ENST00000375597 CLIC3O95833 236 aa12.07□□□□□ -0.48
MCF2L-202ENST00000375597 FGF3P11487 239 aaPredicted RBP12.07□□□□□ -0.48
MCF2L-202ENST00000375597 ABCE1P61221 599 aaKnown RBP12.07□□□□□ -0.48
MCF2L-202ENST00000375597 LRRC8EQ6NSJ5 796 aa12.07□□□□□ -0.48
MCF2L-202ENST00000375597 HFE2Q6ZVN8 426 aa12.07□□□□□ -0.48
MCF2L-202ENST00000375597 EZH1Q92800 747 aaPredicted RBP12.07□□□□□ -0.48
MCF2L-202ENST00000375597 EIF2AQ9BY44 585 aaKnown RBP12.07□□□□□ -0.48
MCF2L-202ENST00000375597 NXF3Q9H4D5 531 aaKnown RBP12.07□□□□□ -0.48
MCF2L-202ENST00000375597 PREBQ9HCU5 417 aa12.07□□□□□ -0.48
MCF2L-202ENST00000375597 BARX2Q9UMQ3 279 aaPredicted RBP12.07□□□□□ -0.48
MCF2L-202ENST00000375597 MKI67P46013 3256 aaKnown RBP12.07□□□□□ -0.48
MCF2L-202ENST00000375597 E7ENQ6 273 aa12.07□□□□□ -0.48
MCF2L-202ENST00000375597 UGT1A6P19224 532 aa12.07□□□□□ -0.48
MCF2L-202ENST00000375597 MX2P20592 715 aa12.07□□□□□ -0.48
MCF2L-202ENST00000375597 RPS6KA3P51812 740 aa12.07□□□□□ -0.48
MCF2L-202ENST00000375597 PCLAFQ15004 111 aa12.07□□□□□ -0.48
MCF2L-202ENST00000375597 KRT80Q6KB66 452 aa12.07□□□□□ -0.48
MCF2L-202ENST00000375597 MTHFD1LQ6UB35 978 aa12.07□□□□□ -0.48
MCF2L-202ENST00000375597 OTOP3Q7RTS5 596 aa12.07□□□□□ -0.48
MCF2L-202ENST00000375597 DENND6AQ8IWF6 608 aa12.07□□□□□ -0.48
MCF2L-202ENST00000375597 NUP93Q8N1F7 819 aa12.07□□□□□ -0.48
MCF2L-202ENST00000375597 DCBLD1Q8N8Z6 715 aa12.07□□□□□ -0.48
MCF2L-202ENST00000375597 NAT14Q8WUY8 206 aa12.07□□□□□ -0.48
MCF2L-202ENST00000375597 PPP2R3CQ969Q6 453 aa12.07□□□□□ -0.48
MCF2L-202ENST00000375597 CCDC106Q9BWC9 280 aa12.07□□□□□ -0.48
MCF2L-202ENST00000375597 ZNF518BQ9C0D4 1074 aa12.07□□□□□ -0.48
MCF2L-202ENST00000375597 PDP2Q9P2J9 529 aa12.07□□□□□ -0.48
MCF2L-202ENST00000375597 THEGQ9P2T0 379 aa12.07□□□□□ -0.48
MCF2L-202ENST00000375597 LRRC37AA6NMS7 1700 aa12.06□□□□□ -0.48
MCF2L-202ENST00000375597 LTBP1Q14766 1721 aa12.06□□□□□ -0.48
MCF2L-202ENST00000375597 TRIP11Q15643 1979 aa12.06□□□□□ -0.48
MCF2L-202ENST00000375597 IRF6O14896 467 aa12.06□□□□□ -0.48
MCF2L-202ENST00000375597 SERPINE1P05121 402 aa12.06□□□□□ -0.48
MCF2L-202ENST00000375597 VDRP11473 427 aa12.06□□□□□ -0.48
MCF2L-202ENST00000375597 CES1P23141 567 aa12.06□□□□□ -0.48
MCF2L-202ENST00000375597 MXD4Q14582 209 aaPredicted RBP12.06□□□□□ -0.48
MCF2L-202ENST00000375597 MAP7D1Q3KQU3 841 aa12.06□□□□□ -0.48
MCF2L-202ENST00000375597 BOLA3Q53S33 107 aa12.06□□□□□ -0.48
MCF2L-202ENST00000375597 SYPL2Q5VXT5 272 aa12.06□□□□□ -0.48
MCF2L-202ENST00000375597 ARHGAP22Q7Z5H3 698 aa12.06□□□□□ -0.48
MCF2L-202ENST00000375597 SIX6OS1Q8N1H7 587 aa12.06□□□□□ -0.48
MCF2L-202ENST00000375597 MIPOL1Q8TD10 442 aa12.06□□□□□ -0.48
MCF2L-202ENST00000375597 FCRL3Q96P31 734 aaPredicted RBP12.06□□□□□ -0.48
MCF2L-202ENST00000375597 SPATA16Q9BXB7 569 aa12.06□□□□□ -0.48
MCF2L-202ENST00000375597 EMCNQ9ULC0 261 aa12.06□□□□□ -0.48
MCF2L-202ENST00000375597 FAM72CH0Y354 149 aa12.06□□□□□ -0.48
MCF2L-202ENST00000375597 MT-CYBP00156 380 aaPredicted RBP12.06□□□□□ -0.48
MCF2L-202ENST00000375597 KLF10Q13118 480 aa12.06□□□□□ -0.48
MCF2L-202ENST00000375597 TLR1Q15399 786 aa12.06□□□□□ -0.48
MCF2L-202ENST00000375597 FAM72AQ5TYM5 149 aa12.06□□□□□ -0.48
MCF2L-202ENST00000375597 FAM72DQ6L9T8 149 aa12.06□□□□□ -0.48
MCF2L-202ENST00000375597 CHSY1Q86X52 802 aa12.06□□□□□ -0.48
MCF2L-202ENST00000375597 FAM72BQ86X60 149 aa12.06□□□□□ -0.48
MCF2L-202ENST00000375597 PARP8Q8N3A8 854 aa12.06□□□□□ -0.48
MCF2L-202ENST00000375597 OR9I1Q8NGQ6 314 aa12.06□□□□□ -0.48
MCF2L-202ENST00000375597 GATA6Q92908 595 aa12.06□□□□□ -0.48
MCF2L-202ENST00000375597 ATP6V1E2Q96A05 226 aa12.06□□□□□ -0.48
MCF2L-202ENST00000375597 CMTM5Q96DZ9 223 aa12.06□□□□□ -0.48
MCF2L-202ENST00000375597 FTHL17Q9BXU8 183 aa12.06□□□□□ -0.48
MCF2L-202ENST00000375597 TMEM165Q9HC07 324 aa12.06□□□□□ -0.48
MCF2L-202ENST00000375597 VCX3AQ9NNX9 186 aa12.06□□□□□ -0.48
MCF2L-202ENST00000375597 COPG2Q9UBF2 871 aa12.06□□□□□ -0.48
MCF2L-202ENST00000375597 PIN4Q9Y237 131 aaKnown RBP12.06□□□□□ -0.48
MCF2L-202ENST00000375597 EVPLQ92817 2033 aa12.05□□□□□ -0.48
MCF2L-202ENST00000375597 CAPN14A8MX76 684 aa12.05□□□□□ -0.48
MCF2L-202ENST00000375597 E7ESA3 106 aa12.05□□□□□ -0.48
MCF2L-202ENST00000375597 EEF2KO00418 725 aaKnown RBP12.05□□□□□ -0.48
MCF2L-202ENST00000375597 TRAFD1O14545 582 aaPredicted RBP12.05□□□□□ -0.48
MCF2L-202ENST00000375597 MAFGO15525 162 aa12.05□□□□□ -0.48
MCF2L-202ENST00000375597 HNRNPCL1O60812 293 aaKnown RBP12.05□□□□□ -0.48
MCF2L-202ENST00000375597 GPC4O75487 556 aa12.05□□□□□ -0.48
MCF2L-202ENST00000375597 VAPBO95292 243 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms