RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 SCAPQ12770 1279 aa16.38■□□□□ 0.21
CNKSR1-202ENST00000374253 TUSC3Q13454 348 aa16.38■□□□□ 0.21
CNKSR1-202ENST00000374253 ITGA7Q13683 1181 aa16.38■□□□□ 0.21
CNKSR1-202ENST00000374253 PACS1Q6VY07 963 aa16.38■□□□□ 0.21
CNKSR1-202ENST00000374253 CHSY1Q86X52 802 aa16.38■□□□□ 0.21
CNKSR1-202ENST00000374253 SUGP1Q8IWZ8 645 aaKnown RBP16.38■□□□□ 0.21
CNKSR1-202ENST00000374253 UTP4Q969X6 686 aaKnown RBP16.38■□□□□ 0.21
CNKSR1-202ENST00000374253 ZNF669Q96BR6 464 aaPredicted RBP16.38■□□□□ 0.21
CNKSR1-202ENST00000374253 AGAP2Q99490 1192 aa16.38■□□□□ 0.21
CNKSR1-202ENST00000374253 MLPHQ9BV36 600 aaPredicted RBP16.38■□□□□ 0.21
CNKSR1-202ENST00000374253 TRPV6Q9H1D0 765 aa16.38■□□□□ 0.21
CNKSR1-202ENST00000374253 L3MBTL1Q9Y468 752 aa16.38■□□□□ 0.21
CNKSR1-202ENST00000374253 CCNB1P14635 433 aa16.38■□□□□ 0.21
CNKSR1-202ENST00000374253 PGAM1P18669 254 aa16.38■□□□□ 0.21
CNKSR1-202ENST00000374253 GPR15P49685 360 aa16.38■□□□□ 0.21
CNKSR1-202ENST00000374253 ARFIP2P53365 341 aa16.38■□□□□ 0.21
CNKSR1-202ENST00000374253 PGGT1BP53609 377 aa16.38■□□□□ 0.21
CNKSR1-202ENST00000374253 CCDC15Q0P6D6 951 aa16.38■□□□□ 0.21
CNKSR1-202ENST00000374253 DSC3Q14574 896 aa16.38■□□□□ 0.21
CNKSR1-202ENST00000374253 ICE2Q659A1 982 aa16.38■□□□□ 0.21
CNKSR1-202ENST00000374253 NUDCD3Q8IVD9 361 aa16.38■□□□□ 0.21
CNKSR1-202ENST00000374253 GPR152Q8TDT2 470 aa16.38■□□□□ 0.21
CNKSR1-202ENST00000374253 MFSD3Q96ES6 412 aa16.38■□□□□ 0.21
CNKSR1-202ENST00000374253 EPAS1Q99814 870 aa16.38■□□□□ 0.21
CNKSR1-202ENST00000374253 ABI2Q9NYB9 513 aaPredicted RBP16.38■□□□□ 0.21
CNKSR1-202ENST00000374253 ZFATQ9P243 1243 aa16.38■□□□□ 0.21
CNKSR1-202ENST00000374253 C2CD2LO14523 706 aa16.37■□□□□ 0.21
CNKSR1-202ENST00000374253 ZNF623O75123 536 aa16.37■□□□□ 0.21
CNKSR1-202ENST00000374253 DDHD2O94830 711 aa16.37■□□□□ 0.21
CNKSR1-202ENST00000374253 MYL2P10916 166 aa16.37■□□□□ 0.21
CNKSR1-202ENST00000374253 GARSP41250 739 aaKnown RBP16.37■□□□□ 0.21
CNKSR1-202ENST00000374253 SLC5A3P53794 718 aa16.37■□□□□ 0.21
CNKSR1-202ENST00000374253 PPIDQ08752 370 aaKnown RBP16.37■□□□□ 0.21
CNKSR1-202ENST00000374253 NIPAL4Q0D2K0 466 aa16.37■□□□□ 0.21
CNKSR1-202ENST00000374253 SLC39A12Q504Y0 691 aa16.37■□□□□ 0.21
CNKSR1-202ENST00000374253 STEAP4Q687X5 459 aa16.37■□□□□ 0.21
CNKSR1-202ENST00000374253 CMC1Q7Z7K0 106 aa16.37■□□□□ 0.21
CNKSR1-202ENST00000374253 NDFIP2Q9NV92 336 aa16.37■□□□□ 0.21
CNKSR1-202ENST00000374253 ZNF358Q9NW07 568 aa16.37■□□□□ 0.21
CNKSR1-202ENST00000374253 ARMCX1Q9P291 453 aa16.37■□□□□ 0.21
CNKSR1-202ENST00000374253 IGSF9Q9P2J2 1179 aa16.37■□□□□ 0.21
CNKSR1-202ENST00000374253 GSTA2P09210 222 aa16.37■□□□□ 0.21
CNKSR1-202ENST00000374253 FAM163BP0C2L3 166 aa16.37■□□□□ 0.21
CNKSR1-202ENST00000374253 MLNP12872 115 aa16.37■□□□□ 0.21
CNKSR1-202ENST00000374253 KCNA4P22459 653 aa16.37■□□□□ 0.21
CNKSR1-202ENST00000374253 CCNFP41002 786 aa16.37■□□□□ 0.21
CNKSR1-202ENST00000374253 RPL10AP62906 217 aaKnown RBP16.37■□□□□ 0.21
CNKSR1-202ENST00000374253 CDK16Q00536 496 aa16.37■□□□□ 0.21
CNKSR1-202ENST00000374253 PDE1BQ01064 536 aa16.37■□□□□ 0.21
CNKSR1-202ENST00000374253 ZBTB16Q05516 673 aa16.37■□□□□ 0.21
CNKSR1-202ENST00000374253 GRIK3Q13003 919 aa16.37■□□□□ 0.21
CNKSR1-202ENST00000374253 CBLBQ13191 982 aa16.37■□□□□ 0.21
CNKSR1-202ENST00000374253 KDELC2Q7Z4H8 507 aa16.37■□□□□ 0.21
CNKSR1-202ENST00000374253 CLNKQ7Z7G1 428 aa16.37■□□□□ 0.21
CNKSR1-202ENST00000374253 RTN4RL1Q86UN2 441 aaPredicted RBP16.37■□□□□ 0.21
CNKSR1-202ENST00000374253 ALYREFQ86V81 257 aaKnown RBP16.37■□□□□ 0.21
CNKSR1-202ENST00000374253 ARID3BQ8IVW6 561 aaPredicted RBP16.37■□□□□ 0.21
CNKSR1-202ENST00000374253 SPATA22Q8NHS9 363 aa16.37■□□□□ 0.21
CNKSR1-202ENST00000374253 CASP10Q92851 521 aa16.37■□□□□ 0.21
CNKSR1-202ENST00000374253 E2F7Q96AV8 911 aa16.37■□□□□ 0.21
CNKSR1-202ENST00000374253 B3GALT6Q96L58 329 aa16.37■□□□□ 0.21
CNKSR1-202ENST00000374253 PKMYT1Q99640 499 aa16.37■□□□□ 0.21
CNKSR1-202ENST00000374253 TXLNGQ9NUQ3 528 aa16.37■□□□□ 0.21
CNKSR1-202ENST00000374253 VANGL2Q9ULK5 521 aa16.37■□□□□ 0.21
CNKSR1-202ENST00000374253 ARHGAP42A6NI28 874 aa16.36■□□□□ 0.21
CNKSR1-202ENST00000374253 ALDH1A2O94788 518 aa16.36■□□□□ 0.21
CNKSR1-202ENST00000374253 DLDP09622 509 aaKnown RBP16.36■□□□□ 0.21
CNKSR1-202ENST00000374253 PDE1CQ14123 709 aaPredicted RBP16.36■□□□□ 0.21
CNKSR1-202ENST00000374253 PM20D1Q6GTS8 502 aa16.36■□□□□ 0.21
CNKSR1-202ENST00000374253 CCSAPQ6IQ19 270 aaPredicted RBP16.36■□□□□ 0.21
CNKSR1-202ENST00000374253 PDZD4Q76G19 769 aaPredicted RBP16.36■□□□□ 0.21
CNKSR1-202ENST00000374253 SPATA2LQ8IUW3 424 aaPredicted RBP16.36■□□□□ 0.21
CNKSR1-202ENST00000374253 SMC1BQ8NDV3 1235 aa16.36■□□□□ 0.21
CNKSR1-202ENST00000374253 PGAP3Q96FM1 320 aaPredicted RBP16.36■□□□□ 0.21
CNKSR1-202ENST00000374253 ZNF419Q96HQ0 510 aaPredicted RBP16.36■□□□□ 0.21
CNKSR1-202ENST00000374253 NMUR1Q9HB89 426 aa16.36■□□□□ 0.21
CNKSR1-202ENST00000374253 EIF2B3Q9NR50 452 aaKnown RBP16.36■□□□□ 0.21
CNKSR1-202ENST00000374253 CHRAC1Q9NRG0 131 aa16.36■□□□□ 0.21
CNKSR1-202ENST00000374253 SF3B1O75533 1304 aaKnown RBP eCLIP16.36■□□□□ 0.21
CNKSR1-202ENST00000374253 AOC2O75106 756 aa16.36■□□□□ 0.21
CNKSR1-202ENST00000374253 LYPLA1O75608 230 aaPredicted RBP16.36■□□□□ 0.21
CNKSR1-202ENST00000374253 POLBP06746 335 aa16.36■□□□□ 0.21
CNKSR1-202ENST00000374253 ITGA2BP08514 1039 aa16.36■□□□□ 0.21
CNKSR1-202ENST00000374253 TSPY1Q01534 308 aa16.36■□□□□ 0.21
CNKSR1-202ENST00000374253 YWHAHQ04917 246 aaPredicted RBP16.36■□□□□ 0.21
CNKSR1-202ENST00000374253 DDR2Q16832 855 aa16.36■□□□□ 0.21
CNKSR1-202ENST00000374253 N4BP2L1Q5TBK1 243 aaPredicted RBP16.36■□□□□ 0.21
CNKSR1-202ENST00000374253 KLHDC9Q8NEP7 349 aa16.36■□□□□ 0.21
CNKSR1-202ENST00000374253 CDKL2Q92772 493 aa16.36■□□□□ 0.21
CNKSR1-202ENST00000374253 SLC7A6OSQ96CW6 309 aaPredicted RBP16.36■□□□□ 0.21
CNKSR1-202ENST00000374253 MTBPQ96DY7 904 aa16.36■□□□□ 0.21
CNKSR1-202ENST00000374253 CERS2Q96G23 380 aa16.36■□□□□ 0.21
CNKSR1-202ENST00000374253 ZNF778Q96MU6 729 aa16.36■□□□□ 0.21
CNKSR1-202ENST00000374253 CAB39LQ9H9S4 337 aa16.36■□□□□ 0.21
CNKSR1-202ENST00000374253 DNAJB4Q9UDY4 337 aa16.36■□□□□ 0.21
CNKSR1-202ENST00000374253 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.36■□□□□ 0.21
CNKSR1-202ENST00000374253 M0QZQ0 153 aa16.35■□□□□ 0.21
CNKSR1-202ENST00000374253 AP2A1O95782 977 aa16.35■□□□□ 0.21
CNKSR1-202ENST00000374253 MT-CYBP00156 380 aaPredicted RBP16.35■□□□□ 0.21
CNKSR1-202ENST00000374253 F9P00740 461 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms