RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 SGCGQ13326 291 aa14.61□□□□□ -0.07
TRAF1-201ENST00000373887 ITIH4Q14624 930 aa14.61□□□□□ -0.07
TRAF1-201ENST00000373887 RIOX2Q8IUF8 465 aa14.61□□□□□ -0.07
TRAF1-201ENST00000373887 PHF21BQ96EK2 531 aa14.61□□□□□ -0.07
TRAF1-201ENST00000373887 GPAMQ9HCL2 828 aa14.61□□□□□ -0.07
TRAF1-201ENST00000373887 OSGEPQ9NPF4 335 aa14.61□□□□□ -0.07
TRAF1-201ENST00000373887 DEPDC5O75140 1603 aa14.61□□□□□ -0.07
TRAF1-201ENST00000373887 TMEM88BA6NKF7 163 aa14.61□□□□□ -0.07
TRAF1-201ENST00000373887 XYLBO75191 536 aa14.61□□□□□ -0.07
TRAF1-201ENST00000373887 GJB6O95452 261 aa14.61□□□□□ -0.07
TRAF1-201ENST00000373887 LTFP02788 710 aa14.61□□□□□ -0.07
TRAF1-201ENST00000373887 IL6P05231 212 aa14.61□□□□□ -0.07
TRAF1-201ENST00000373887 STIP1P31948 543 aaKnown RBP14.61□□□□□ -0.07
TRAF1-201ENST00000373887 GRK4P32298 578 aa14.61□□□□□ -0.07
TRAF1-201ENST00000373887 ADRM1Q16186 407 aa14.61□□□□□ -0.07
TRAF1-201ENST00000373887 RGL4Q8IZJ4 473 aa14.61□□□□□ -0.07
TRAF1-201ENST00000373887 CCDC126Q96EE4 140 aa14.61□□□□□ -0.07
TRAF1-201ENST00000373887 CORO1BQ9BR76 489 aa14.61□□□□□ -0.07
TRAF1-201ENST00000373887 PAIP1Q9H074 479 aaKnown RBP14.61□□□□□ -0.07
TRAF1-201ENST00000373887 RAD21L1Q9H4I0 556 aa14.61□□□□□ -0.07
TRAF1-201ENST00000373887 MRPL17Q9NRX2 175 aaKnown RBP14.61□□□□□ -0.07
TRAF1-201ENST00000373887 ZNF541Q9H0D2 1346 aa14.61□□□□□ -0.07
TRAF1-201ENST00000373887 MOXD2PA6NHM9 499 aa14.6□□□□□ -0.07
TRAF1-201ENST00000373887 SDR42E2A6NKP2 422 aa14.6□□□□□ -0.07
TRAF1-201ENST00000373887 H3BN98 237 aa14.6□□□□□ -0.07
TRAF1-201ENST00000373887 PSMD12O00232 456 aaPredicted RBP14.6□□□□□ -0.07
TRAF1-201ENST00000373887 SRP54P61011 504 aaKnown RBP14.6□□□□□ -0.07
TRAF1-201ENST00000373887 ACOX1Q15067 660 aa14.6□□□□□ -0.07
TRAF1-201ENST00000373887 DEFB107AQ8IZN7 70 aa14.6□□□□□ -0.07
TRAF1-201ENST00000373887 SERAC1Q96JX3 654 aa14.6□□□□□ -0.07
TRAF1-201ENST00000373887 DPP7Q9UHL4 492 aa14.6□□□□□ -0.07
TRAF1-201ENST00000373887 LNPEPQ9UIQ6 1025 aa14.6□□□□□ -0.07
TRAF1-201ENST00000373887 ANKRD63C9JTQ0 380 aa14.6□□□□□ -0.07
TRAF1-201ENST00000373887 SH3BGRLO75368 114 aa14.6□□□□□ -0.07
TRAF1-201ENST00000373887 NFE2Q16621 373 aaPredicted RBP14.6□□□□□ -0.07
TRAF1-201ENST00000373887 VPS33AQ96AX1 596 aa14.6□□□□□ -0.07
TRAF1-201ENST00000373887 PAFAH2Q99487 392 aa14.6□□□□□ -0.07
TRAF1-201ENST00000373887 PDGFCQ9NRA1 345 aa14.6□□□□□ -0.07
TRAF1-201ENST00000373887 CHURC1-FNTBB4DL54 471 aa14.6□□□□□ -0.07
TRAF1-201ENST00000373887 TRDMT1O14717 391 aaKnown RBP14.6□□□□□ -0.07
TRAF1-201ENST00000373887 TIGD7Q6NT04 549 aaPredicted RBP14.6□□□□□ -0.07
TRAF1-201ENST00000373887 SMARCD1Q96GM5 515 aa14.6□□□□□ -0.07
TRAF1-201ENST00000373887 CEP44Q9C0F1 390 aa14.6□□□□□ -0.07
TRAF1-201ENST00000373887 BARX2Q9UMQ3 279 aaPredicted RBP14.6□□□□□ -0.07
TRAF1-201ENST00000373887 FBXO21O94952 628 aa14.6□□□□□ -0.07
TRAF1-201ENST00000373887 SNX30Q5VWJ9 437 aa14.6□□□□□ -0.07
TRAF1-201ENST00000373887 ZCCHC8Q6NZY4 707 aaKnown RBP14.6□□□□□ -0.07
TRAF1-201ENST00000373887 SAMD3Q8N6K7 520 aa14.6□□□□□ -0.07
TRAF1-201ENST00000373887 ANKS1AQ92625 1134 aa14.6□□□□□ -0.07
TRAF1-201ENST00000373887 SLC5A5Q92911 643 aa14.6□□□□□ -0.07
TRAF1-201ENST00000373887 CYP2F1P24903 491 aa14.6□□□□□ -0.07
TRAF1-201ENST00000373887 TUBP50607 506 aa14.6□□□□□ -0.07
TRAF1-201ENST00000373887 KDM7AQ6ZMT4 941 aa14.6□□□□□ -0.07
TRAF1-201ENST00000373887 TRMT11Q7Z4G4 463 aaKnown RBP14.6□□□□□ -0.07
TRAF1-201ENST00000373887 KIAA0319LQ8IZA0 1049 aa14.6□□□□□ -0.07
TRAF1-201ENST00000373887 CD99L2Q8TCZ2 262 aa14.6□□□□□ -0.07
TRAF1-201ENST00000373887 ZSWIM1Q9BR11 485 aa14.6□□□□□ -0.07
TRAF1-201ENST00000373887 MRPL9Q9BYD2 267 aaKnown RBP14.6□□□□□ -0.07
TRAF1-201ENST00000373887 ATP13A1Q9HD20 1204 aa14.6□□□□□ -0.07
TRAF1-201ENST00000373887 SIK3Q9Y2K2 1263 aa14.6□□□□□ -0.07
TRAF1-201ENST00000373887 CALB2P22676 271 aa14.59□□□□□ -0.07
TRAF1-201ENST00000373887 MAP2K5Q13163 448 aa14.59□□□□□ -0.07
TRAF1-201ENST00000373887 TOMM20Q15388 145 aa14.59□□□□□ -0.07
TRAF1-201ENST00000373887 UTS2BQ765I0 119 aa14.59□□□□□ -0.07
TRAF1-201ENST00000373887 GPR152Q8TDT2 470 aa14.59□□□□□ -0.07
TRAF1-201ENST00000373887 TRIM63Q969Q1 353 aa14.59□□□□□ -0.07
TRAF1-201ENST00000373887 CD52P31358 61 aa14.59□□□□□ -0.07
TRAF1-201ENST00000373887 CCR1P32246 355 aa14.59□□□□□ -0.07
TRAF1-201ENST00000373887 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.59□□□□□ -0.07
TRAF1-201ENST00000373887 PRCCQ92733 491 aaPredicted RBP14.59□□□□□ -0.07
TRAF1-201ENST00000373887 MTFMTQ96DP5 389 aaKnown RBP14.59□□□□□ -0.07
TRAF1-201ENST00000373887 SYT17Q9BSW7 474 aa14.59□□□□□ -0.07
TRAF1-201ENST00000373887 SLC27A5Q9Y2P5 690 aa14.59□□□□□ -0.07
TRAF1-201ENST00000373887 TIMM44O43615 452 aa14.59□□□□□ -0.07
TRAF1-201ENST00000373887 F9P00740 461 aa14.59□□□□□ -0.07
TRAF1-201ENST00000373887 FLT3LGP49771 235 aa14.59□□□□□ -0.07
TRAF1-201ENST00000373887 SDHAF4Q5VUM1 108 aa14.59□□□□□ -0.07
TRAF1-201ENST00000373887 LRRC6Q86X45 466 aa14.59□□□□□ -0.07
TRAF1-201ENST00000373887 ZCCHC7Q8N3Z6 543 aaKnown RBP14.59□□□□□ -0.07
TRAF1-201ENST00000373887 C3orf20Q8ND61 904 aa14.59□□□□□ -0.07
TRAF1-201ENST00000373887 SPACA7Q96KW9 195 aa14.59□□□□□ -0.07
TRAF1-201ENST00000373887 ACTR8Q9H981 624 aa14.59□□□□□ -0.07
TRAF1-201ENST00000373887 GTF3C4Q9UKN8 822 aa14.59□□□□□ -0.07
TRAF1-201ENST00000373887 IQGAP1P46940 1657 aa14.59□□□□□ -0.07
TRAF1-201ENST00000373887 TLL1O43897 1013 aa14.59□□□□□ -0.07
TRAF1-201ENST00000373887 GLP2RO95838 553 aa14.59□□□□□ -0.07
TRAF1-201ENST00000373887 FAM58BPP0C7Q3 252 aa14.59□□□□□ -0.07
TRAF1-201ENST00000373887 ITGALP20701 1170 aa14.59□□□□□ -0.07
TRAF1-201ENST00000373887 SFSWAPQ12872 951 aaKnown RBP14.59□□□□□ -0.07
TRAF1-201ENST00000373887 NOGQ13253 232 aa14.59□□□□□ -0.07
TRAF1-201ENST00000373887 TAF13Q15543 124 aa14.59□□□□□ -0.07
TRAF1-201ENST00000373887 TFDP3Q5H9I0 405 aa14.59□□□□□ -0.07
TRAF1-201ENST00000373887 CDC73Q6P1J9 531 aa14.59□□□□□ -0.07
TRAF1-201ENST00000373887 RPRD1BQ9NQG5 326 aaKnown RBP14.59□□□□□ -0.07
TRAF1-201ENST00000373887 SH3GLB1Q9Y371 365 aa14.59□□□□□ -0.07
TRAF1-201ENST00000373887 PTGES3LE9PB15 166 aa14.59□□□□□ -0.07
TRAF1-201ENST00000373887 MTRF1O75570 445 aaKnown RBP14.59□□□□□ -0.07
TRAF1-201ENST00000373887 HLA-DQA2P01906 255 aa14.59□□□□□ -0.07
TRAF1-201ENST00000373887 SAPCD2Q86UD0 394 aa14.59□□□□□ -0.07
TRAF1-201ENST00000373887 GDPD5Q8WTR4 605 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms