RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 PMM2O15305 246 aa17.76■□□□□ 0.43
PTPRU-202ENST00000373779 BAIAP3O94812 1187 aa17.76■□□□□ 0.43
PTPRU-202ENST00000373779 TRIM16LQ309B1 348 aa17.76■□□□□ 0.43
PTPRU-202ENST00000373779 UGT3A1Q6NUS8 523 aa17.76■□□□□ 0.43
PTPRU-202ENST00000373779 ABHD15Q6UXT9 468 aa17.76■□□□□ 0.43
PTPRU-202ENST00000373779 PACS1Q6VY07 963 aa17.76■□□□□ 0.43
PTPRU-202ENST00000373779 CATSPERGQ6ZRH7 1159 aa17.76■□□□□ 0.43
PTPRU-202ENST00000373779 HORMAD1Q86X24 394 aa17.76■□□□□ 0.43
PTPRU-202ENST00000373779 XYLT1Q86Y38 959 aa17.76■□□□□ 0.43
PTPRU-202ENST00000373779 PPP1R10Q96QC0 940 aaKnown RBP17.76■□□□□ 0.43
PTPRU-202ENST00000373779 CDHR5Q9HBB8 845 aa17.76■□□□□ 0.43
PTPRU-202ENST00000373779 SYTL2Q9HCH5 934 aa17.76■□□□□ 0.43
PTPRU-202ENST00000373779 WRAP73Q9P2S5 460 aaPredicted RBP17.76■□□□□ 0.43
PTPRU-202ENST00000373779 EIF3LQ9Y262 564 aaKnown RBP17.76■□□□□ 0.43
PTPRU-202ENST00000373779 COQ4Q9Y3A0 265 aa17.76■□□□□ 0.43
PTPRU-202ENST00000373779 C2orf81A6NN90 581 aa17.76■□□□□ 0.43
PTPRU-202ENST00000373779 CRHR1P34998 444 aa17.76■□□□□ 0.43
PTPRU-202ENST00000373779 TMED10P49755 219 aaKnown RBP17.76■□□□□ 0.43
PTPRU-202ENST00000373779 NAGLUP54802 743 aa17.76■□□□□ 0.43
PTPRU-202ENST00000373779 PLIN5Q00G26 463 aa17.76■□□□□ 0.43
PTPRU-202ENST00000373779 EFCAB3Q8N7B9 438 aa17.76■□□□□ 0.43
PTPRU-202ENST00000373779 RBM15BQ8NDT2 890 aaKnown RBP17.76■□□□□ 0.43
PTPRU-202ENST00000373779 L3MBTL3Q96JM7 780 aaPredicted RBP17.76■□□□□ 0.43
PTPRU-202ENST00000373779 MAN1C1Q9NR34 630 aa17.76■□□□□ 0.43
PTPRU-202ENST00000373779 COMMD3-BMI1R4GMX3 469 aa17.76■□□□□ 0.43
PTPRU-202ENST00000373779 RGSL1A5PLK6 1076 aa17.76■□□□□ 0.43
PTPRU-202ENST00000373779 STX7O15400 261 aaKnown RBP17.76■□□□□ 0.43
PTPRU-202ENST00000373779 SZRD1Q7Z422 152 aa17.76■□□□□ 0.43
PTPRU-202ENST00000373779 ZNF410Q86VK4 478 aa17.76■□□□□ 0.43
PTPRU-202ENST00000373779 CPXM1Q96SM3 734 aa17.76■□□□□ 0.43
PTPRU-202ENST00000373779 PCDH18Q9HCL0 1135 aa17.76■□□□□ 0.43
PTPRU-202ENST00000373779 PDGFCQ9NRA1 345 aa17.76■□□□□ 0.43
PTPRU-202ENST00000373779 PACSIN3Q9UKS6 424 aa17.76■□□□□ 0.43
PTPRU-202ENST00000373779 A0A087X1B8 175 aa17.75■□□□□ 0.43
PTPRU-202ENST00000373779 NOS2P35228 1153 aa17.75■□□□□ 0.43
PTPRU-202ENST00000373779 TMCO5AQ8N6Q1 288 aa17.75■□□□□ 0.43
PTPRU-202ENST00000373779 ZMAT2Q96NC0 199 aaKnown RBP17.75■□□□□ 0.43
PTPRU-202ENST00000373779 DAB1O75553 588 aa17.75■□□□□ 0.43
PTPRU-202ENST00000373779 TM7SF2O76062 418 aa17.75■□□□□ 0.43
PTPRU-202ENST00000373779 S100A5P33763 92 aa17.75■□□□□ 0.43
PTPRU-202ENST00000373779 DMC1Q14565 340 aa17.75■□□□□ 0.43
PTPRU-202ENST00000373779 PCDH20Q8N6Y1 951 aaKnown RBP17.75■□□□□ 0.43
PTPRU-202ENST00000373779 FNIP1Q8TF40 1166 aa17.75■□□□□ 0.43
PTPRU-202ENST00000373779 GPR63Q9BZJ6 419 aa17.75■□□□□ 0.43
PTPRU-202ENST00000373779 MGAT5BQ3V5L5 792 aa17.75■□□□□ 0.43
PTPRU-202ENST00000373779 WNT8BQ93098 351 aa17.75■□□□□ 0.43
PTPRU-202ENST00000373779 PNPOQ9NVS9 261 aa17.75■□□□□ 0.43
PTPRU-202ENST00000373779 COL20A1Q9P218 1284 aa17.75■□□□□ 0.43
PTPRU-202ENST00000373779 NDUFAF1Q9Y375 327 aa17.75■□□□□ 0.43
PTPRU-202ENST00000373779 MAGEC1O60732 1142 aa17.75■□□□□ 0.43
PTPRU-202ENST00000373779 PGM3O95394 542 aa17.75■□□□□ 0.43
PTPRU-202ENST00000373779 THP07101 528 aa17.75■□□□□ 0.43
PTPRU-202ENST00000373779 ATP6AP1LQ52LC2 224 aa17.75■□□□□ 0.43
PTPRU-202ENST00000373779 CELF3Q5SZQ8 465 aaKnown RBP17.75■□□□□ 0.43
PTPRU-202ENST00000373779 DAW1Q8N136 415 aa17.75■□□□□ 0.43
PTPRU-202ENST00000373779 MARK4Q96L34 752 aa17.75■□□□□ 0.43
PTPRU-202ENST00000373779 P2RX7Q99572 595 aaKnown RBP17.75■□□□□ 0.43
PTPRU-202ENST00000373779 C6orf203Q9P0P8 240 aaPredicted RBP17.75■□□□□ 0.43
PTPRU-202ENST00000373779 CCL15-CCL14A0A0B4J2E2 113 aa17.74■□□□□ 0.43
PTPRU-202ENST00000373779 SMIM31A0A1B0GVY4 71 aa17.74■□□□□ 0.43
PTPRU-202ENST00000373779 GOT1P17174 413 aa17.74■□□□□ 0.43
PTPRU-202ENST00000373779 ADSSP30520 456 aa17.74■□□□□ 0.43
PTPRU-202ENST00000373779 HOXD13P35453 343 aa17.74■□□□□ 0.43
PTPRU-202ENST00000373779 GRIA4P48058 902 aa17.74■□□□□ 0.43
PTPRU-202ENST00000373779 XIAPP98170 497 aa17.74■□□□□ 0.43
PTPRU-202ENST00000373779 MAP3K10Q02779 954 aa17.74■□□□□ 0.43
PTPRU-202ENST00000373779 NRF1Q16656 503 aa17.74■□□□□ 0.43
PTPRU-202ENST00000373779 CCL15Q16663 113 aa17.74■□□□□ 0.43
PTPRU-202ENST00000373779 GLB1LQ6UWU2 654 aa17.74■□□□□ 0.43
PTPRU-202ENST00000373779 CCDC81Q6ZN84 652 aa17.74■□□□□ 0.43
PTPRU-202ENST00000373779 SNX15Q9NRS6 342 aa17.74■□□□□ 0.43
PTPRU-202ENST00000373779 SNCAIPQ9Y6H5 919 aa17.74■□□□□ 0.43
PTPRU-202ENST00000373779 B4GALT5O43286 388 aa17.74■□□□□ 0.43
PTPRU-202ENST00000373779 CETPP11597 493 aa17.74■□□□□ 0.43
PTPRU-202ENST00000373779 CLK1P49759 484 aaKnown RBP17.74■□□□□ 0.43
PTPRU-202ENST00000373779 WDR4P57081 412 aaKnown RBP17.74■□□□□ 0.43
PTPRU-202ENST00000373779 CLVS1Q8IUQ0 354 aaPredicted RBP17.74■□□□□ 0.43
PTPRU-202ENST00000373779 SNX31Q8N9S9 440 aa17.74■□□□□ 0.43
PTPRU-202ENST00000373779 RP9Q8TA86 221 aaKnown RBP17.74■□□□□ 0.43
PTPRU-202ENST00000373779 CADM1Q9BY67 442 aaKnown RBP17.74■□□□□ 0.43
PTPRU-202ENST00000373779 GPBP1L1Q9HC44 474 aaPredicted RBP17.74■□□□□ 0.43
PTPRU-202ENST00000373779 CHCHD3Q9NX63 227 aaKnown RBP17.74■□□□□ 0.43
PTPRU-202ENST00000373779 SYBUQ9NX95 663 aa17.74■□□□□ 0.43
PTPRU-202ENST00000373779 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.74■□□□□ 0.43
PTPRU-202ENST00000373779 ZNF197O14709 1029 aa17.74■□□□□ 0.43
PTPRU-202ENST00000373779 CST3P01034 146 aaPredicted RBP17.74■□□□□ 0.43
PTPRU-202ENST00000373779 ENPEPQ07075 957 aa17.74■□□□□ 0.43
PTPRU-202ENST00000373779 TMEM132BQ14DG7 1078 aa17.74■□□□□ 0.43
PTPRU-202ENST00000373779 ANKS1BQ7Z6G8 1248 aa17.74■□□□□ 0.43
PTPRU-202ENST00000373779 LGMNQ99538 433 aa17.74■□□□□ 0.43
PTPRU-202ENST00000373779 PCDHGC3Q9UN70 934 aa17.74■□□□□ 0.43
PTPRU-202ENST00000373779 EVPLLA8MZ36 301 aa17.74■□□□□ 0.43
PTPRU-202ENST00000373779 MSLNQ13421 630 aaPredicted RBP17.74■□□□□ 0.43
PTPRU-202ENST00000373779 CACHD1Q5VU97 1274 aa17.74■□□□□ 0.43
PTPRU-202ENST00000373779 EEF1DP3Q658K8 133 aa17.74■□□□□ 0.43
PTPRU-202ENST00000373779 LZICQ8WZA0 190 aa17.74■□□□□ 0.43
PTPRU-202ENST00000373779 DCUN1D1Q96GG9 259 aa17.74■□□□□ 0.43
PTPRU-202ENST00000373779 RAP2CQ9Y3L5 183 aa17.74■□□□□ 0.43
PTPRU-202ENST00000373779 DPPA5A6NC42 116 aa17.74■□□□□ 0.43
PTPRU-202ENST00000373779 CCR1P32246 355 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms