RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 EPAS1Q99814 870 aa19.2■□□□□ 0.66
USP49-202ENST00000373010 ADAM2Q99965 735 aa19.2■□□□□ 0.66
USP49-202ENST00000373010 C20orf27Q9GZN8 174 aa19.2■□□□□ 0.66
USP49-202ENST00000373010 SAR1AQ9NR31 198 aa19.2■□□□□ 0.66
USP49-202ENST00000373010 RRN3Q9NYV6 651 aa19.2■□□□□ 0.66
USP49-202ENST00000373010 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.2■□□□□ 0.66
USP49-202ENST00000373010 ZNF623O75123 536 aa19.2■□□□□ 0.66
USP49-202ENST00000373010 AP2A1O95782 977 aa19.2■□□□□ 0.66
USP49-202ENST00000373010 POLBP06746 335 aa19.2■□□□□ 0.66
USP49-202ENST00000373010 GMPRP36959 345 aa19.2■□□□□ 0.66
USP49-202ENST00000373010 FLT3LGP49771 235 aa19.2■□□□□ 0.66
USP49-202ENST00000373010 PDE1CQ14123 709 aaPredicted RBP19.2■□□□□ 0.66
USP49-202ENST00000373010 LPIN1Q14693 890 aa19.2■□□□□ 0.66
USP49-202ENST00000373010 PREPLQ4J6C6 727 aaPredicted RBP19.2■□□□□ 0.66
USP49-202ENST00000373010 SPDYAQ5MJ70 313 aa19.2■□□□□ 0.66
USP49-202ENST00000373010 ATG16L1Q676U5 607 aa19.2■□□□□ 0.66
USP49-202ENST00000373010 PM20D1Q6GTS8 502 aa19.2■□□□□ 0.66
USP49-202ENST00000373010 TTC7BQ86TV6 843 aa19.2■□□□□ 0.66
USP49-202ENST00000373010 DQX1Q8TE96 717 aaKnown RBP19.2■□□□□ 0.66
USP49-202ENST00000373010 APOL2Q9BQE5 337 aa19.2■□□□□ 0.66
USP49-202ENST00000373010 NAT9Q9BTE0 207 aa19.2■□□□□ 0.66
USP49-202ENST00000373010 MLPHQ9BV36 600 aaPredicted RBP19.2■□□□□ 0.66
USP49-202ENST00000373010 EMCNQ9ULC0 261 aa19.2■□□□□ 0.66
USP49-202ENST00000373010 RAD54BQ9Y620 910 aa19.2■□□□□ 0.66
USP49-202ENST00000373010 ADAMTS4O75173 837 aa19.19■□□□□ 0.66
USP49-202ENST00000373010 GARSP41250 739 aaKnown RBP19.19■□□□□ 0.66
USP49-202ENST00000373010 OCRLQ01968 901 aa19.19■□□□□ 0.66
USP49-202ENST00000373010 GALNT2Q10471 571 aa19.19■□□□□ 0.66
USP49-202ENST00000373010 DSC3Q14574 896 aa19.19■□□□□ 0.66
USP49-202ENST00000373010 KCNA10Q16322 511 aa19.19■□□□□ 0.66
USP49-202ENST00000373010 C7orf26Q96N11 449 aa19.19■□□□□ 0.66
USP49-202ENST00000373010 PKMYT1Q99640 499 aa19.19■□□□□ 0.66
USP49-202ENST00000373010 DMAP1Q9NPF5 467 aaPredicted RBP19.19■□□□□ 0.66
USP49-202ENST00000373010 ZFATQ9P243 1243 aa19.19■□□□□ 0.66
USP49-202ENST00000373010 MARCOQ9UEW3 520 aaPredicted RBP19.19■□□□□ 0.66
USP49-202ENST00000373010 A0A0U1RQF3 1178 aa19.19■□□□□ 0.66
USP49-202ENST00000373010 NCAM2O15394 837 aa19.19■□□□□ 0.66
USP49-202ENST00000373010 SEPT4O43236 478 aa19.19■□□□□ 0.66
USP49-202ENST00000373010 ITGA2BP08514 1039 aa19.19■□□□□ 0.66
USP49-202ENST00000373010 KITP10721 976 aa19.19■□□□□ 0.66
USP49-202ENST00000373010 NFKB1P19838 968 aa19.19■□□□□ 0.66
USP49-202ENST00000373010 WLSQ5T9L3 541 aa19.19■□□□□ 0.66
USP49-202ENST00000373010 N4BP2L1Q5TBK1 243 aaPredicted RBP19.19■□□□□ 0.66
USP49-202ENST00000373010 RPAINQ86UA6 219 aa19.19■□□□□ 0.66
USP49-202ENST00000373010 ARID3BQ8IVW6 561 aaPredicted RBP19.19■□□□□ 0.66
USP49-202ENST00000373010 DNAAF3Q8N9W5 541 aa19.19■□□□□ 0.66
USP49-202ENST00000373010 SMC1BQ8NDV3 1235 aa19.19■□□□□ 0.66
USP49-202ENST00000373010 IRGQQ8WZA9 623 aa19.19■□□□□ 0.66
USP49-202ENST00000373010 ZNF669Q96BR6 464 aaPredicted RBP19.19■□□□□ 0.66
USP49-202ENST00000373010 HDAC11Q96DB2 347 aa19.19■□□□□ 0.66
USP49-202ENST00000373010 CERS2Q96G23 380 aa19.19■□□□□ 0.66
USP49-202ENST00000373010 VANGL2Q9ULK5 521 aa19.19■□□□□ 0.66
USP49-202ENST00000373010 GSRP00390 522 aa19.18■□□□□ 0.66
USP49-202ENST00000373010 CYP11A1P05108 521 aa19.18■□□□□ 0.66
USP49-202ENST00000373010 SRGAP2BP0DMP2 458 aa19.18■□□□□ 0.66
USP49-202ENST00000373010 INHBEP58166 350 aa19.18■□□□□ 0.66
USP49-202ENST00000373010 PDE1BQ01064 536 aa19.18■□□□□ 0.66
USP49-202ENST00000373010 CACNB2Q08289 660 aaPredicted RBP19.18■□□□□ 0.66
USP49-202ENST00000373010 HSF5Q4G112 596 aaPredicted RBP19.18■□□□□ 0.66
USP49-202ENST00000373010 PPM1JQ5JR12 505 aa19.18■□□□□ 0.66
USP49-202ENST00000373010 ALYREFQ86V81 257 aaKnown RBP19.18■□□□□ 0.66
USP49-202ENST00000373010 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.18■□□□□ 0.66
USP49-202ENST00000373010 SIK2Q9H0K1 926 aa19.18■□□□□ 0.66
USP49-202ENST00000373010 GBA3Q9H227 469 aa19.18■□□□□ 0.66
USP49-202ENST00000373010 UBP1Q9NZI7 540 aa19.18■□□□□ 0.66
USP49-202ENST00000373010 MRPL42Q9Y6G3 142 aaKnown RBP19.18■□□□□ 0.66
USP49-202ENST00000373010 E2F8A0AVK6 867 aa19.17■□□□□ 0.66
USP49-202ENST00000373010 DNAJC6O75061 913 aa19.17■□□□□ 0.66
USP49-202ENST00000373010 PTPN4P29074 926 aa19.17■□□□□ 0.66
USP49-202ENST00000373010 RASSF2P50749 326 aa19.17■□□□□ 0.66
USP49-202ENST00000373010 RAB27AP51159 221 aa19.17■□□□□ 0.66
USP49-202ENST00000373010 TUSC3Q13454 348 aa19.17■□□□□ 0.66
USP49-202ENST00000373010 SPANXN3Q5MJ09 141 aa19.17■□□□□ 0.66
USP49-202ENST00000373010 CERCAMQ5T4B2 595 aa19.17■□□□□ 0.66
USP49-202ENST00000373010 KCTD11Q693B1 232 aa19.17■□□□□ 0.66
USP49-202ENST00000373010 OVOS1Q6IE37 1185 aa19.17■□□□□ 0.66
USP49-202ENST00000373010 RSPH1Q8WYR4 309 aa19.17■□□□□ 0.66
USP49-202ENST00000373010 CASS4Q9NQ75 786 aa19.17■□□□□ 0.66
USP49-202ENST00000373010 PTPRDP23468 1912 aa19.17■□□□□ 0.66
USP49-202ENST00000373010 NLRC5Q86WI3 1866 aa19.17■□□□□ 0.66
USP49-202ENST00000373010 FAM155AB1AL88 458 aaPredicted RBP19.17■□□□□ 0.66
USP49-202ENST00000373010 M0QZQ0 153 aa19.17■□□□□ 0.66
USP49-202ENST00000373010 TRAFD1O14545 582 aaPredicted RBP19.17■□□□□ 0.66
USP49-202ENST00000373010 BIRC5O15392 142 aa19.17■□□□□ 0.66
USP49-202ENST00000373010 JCHAINP01591 159 aa19.17■□□□□ 0.66
USP49-202ENST00000373010 MX2P20592 715 aa19.17■□□□□ 0.66
USP49-202ENST00000373010 CCND3P30281 292 aaPredicted RBP19.17■□□□□ 0.66
USP49-202ENST00000373010 PGFP49763 221 aa19.17■□□□□ 0.66
USP49-202ENST00000373010 FCGRTP55899 365 aa19.17■□□□□ 0.66
USP49-202ENST00000373010 RPL10AP62906 217 aaKnown RBP19.17■□□□□ 0.66
USP49-202ENST00000373010 GRIK3Q13003 919 aa19.17■□□□□ 0.66
USP49-202ENST00000373010 NAB1Q13506 487 aa19.17■□□□□ 0.66
USP49-202ENST00000373010 FASTKD1Q53R41 847 aaKnown RBP19.17■□□□□ 0.66
USP49-202ENST00000373010 RWDD4Q6NW29 188 aaKnown RBP19.17■□□□□ 0.66
USP49-202ENST00000373010 FAM13CQ8NE31 585 aa19.17■□□□□ 0.66
USP49-202ENST00000373010 USP33Q8TEY7 942 aa19.17■□□□□ 0.66
USP49-202ENST00000373010 PTCD3Q96EY7 689 aaKnown RBP19.17■□□□□ 0.66
USP49-202ENST00000373010 LRRC40Q9H9A6 602 aa19.17■□□□□ 0.66
USP49-202ENST00000373010 TRMT13Q9NUP7 481 aaKnown RBP19.17■□□□□ 0.66
USP49-202ENST00000373010 BFARQ9NZS9 450 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms