RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 CDH19Q9H159 772 aa14.02□□□□□ -0.16
USP49-201ENST00000373006 TCF7L2Q9NQB0 619 aa14.02□□□□□ -0.16
USP49-201ENST00000373006 NRBP2Q9NSY0 501 aa14.02□□□□□ -0.16
USP49-201ENST00000373006 PAIP2BQ9ULR5 123 aaKnown RBP14.02□□□□□ -0.16
USP49-201ENST00000373006 A0A0J9YVX5 310 aa14.02□□□□□ -0.17
USP49-201ENST00000373006 TNFAIP8O95379 198 aa14.02□□□□□ -0.17
USP49-201ENST00000373006 PSMD7P51665 324 aa14.02□□□□□ -0.17
USP49-201ENST00000373006 EFNA5P52803 228 aa14.02□□□□□ -0.17
USP49-201ENST00000373006 NDST1P52848 882 aa14.02□□□□□ -0.17
USP49-201ENST00000373006 IRF9Q00978 393 aa14.02□□□□□ -0.17
USP49-201ENST00000373006 CXCL9Q07325 125 aa14.02□□□□□ -0.17
USP49-201ENST00000373006 SLC44A4Q53GD3 710 aa14.02□□□□□ -0.17
USP49-201ENST00000373006 TMEM198Q66K66 360 aa14.02□□□□□ -0.17
USP49-201ENST00000373006 PMF1Q6P1K2 205 aa14.02□□□□□ -0.17
USP49-201ENST00000373006 SAMD7Q7Z3H4 446 aa14.02□□□□□ -0.17
USP49-201ENST00000373006 PTAR1Q7Z6K3 402 aaPredicted RBP14.02□□□□□ -0.17
USP49-201ENST00000373006 TDRD5Q8NAT2 981 aaKnown RBP14.02□□□□□ -0.17
USP49-201ENST00000373006 ZSCAN18Q8TBC5 510 aaPredicted RBP14.02□□□□□ -0.17
USP49-201ENST00000373006 PPP1R16BQ96T49 567 aa14.02□□□□□ -0.17
USP49-201ENST00000373006 SNX15Q9NRS6 342 aa14.02□□□□□ -0.17
USP49-201ENST00000373006 FAM49BQ9NUQ9 324 aa14.02□□□□□ -0.17
USP49-201ENST00000373006 SEPT10Q9P0V9 454 aa14.02□□□□□ -0.17
USP49-201ENST00000373006 FAF1Q9UNN5 650 aaPredicted RBP14.02□□□□□ -0.17
USP49-201ENST00000373006 AFG3L2Q9Y4W6 797 aa14.02□□□□□ -0.17
USP49-201ENST00000373006 HES2Q9Y543 173 aa14.02□□□□□ -0.17
USP49-201ENST00000373006 ALOX15P16050 662 aaPredicted RBP14.02□□□□□ -0.17
USP49-201ENST00000373006 TPSB2P20231 275 aa14.02□□□□□ -0.17
USP49-201ENST00000373006 MX2P20592 715 aa14.02□□□□□ -0.17
USP49-201ENST00000373006 PIK3R1P27986 724 aa14.02□□□□□ -0.17
USP49-201ENST00000373006 TARBP2Q15633 366 aaKnown RBP14.02□□□□□ -0.17
USP49-201ENST00000373006 TPSAB1Q15661 275 aa14.02□□□□□ -0.17
USP49-201ENST00000373006 SH2D4BQ5SQS7 431 aa14.02□□□□□ -0.17
USP49-201ENST00000373006 ATF7IP2Q5U623 682 aa14.02□□□□□ -0.17
USP49-201ENST00000373006 KYQ8NBH2 561 aa14.02□□□□□ -0.17
USP49-201ENST00000373006 TRAPPC12Q8WVT3 735 aa14.02□□□□□ -0.17
USP49-201ENST00000373006 ARNTL2Q8WYA1 636 aa14.02□□□□□ -0.17
USP49-201ENST00000373006 RCN3Q96D15 328 aa14.02□□□□□ -0.17
USP49-201ENST00000373006 SYBUQ9NX95 663 aa14.02□□□□□ -0.17
USP49-201ENST00000373006 MTMR10Q9NXD2 777 aa14.02□□□□□ -0.17
USP49-201ENST00000373006 ZNF214Q9UL59 606 aaPredicted RBP14.02□□□□□ -0.17
USP49-201ENST00000373006 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.01□□□□□ -0.17
USP49-201ENST00000373006 STRNO43815 780 aa14.01□□□□□ -0.17
USP49-201ENST00000373006 ALDH1A2O94788 518 aa14.01□□□□□ -0.17
USP49-201ENST00000373006 LTFP02788 710 aa14.01□□□□□ -0.17
USP49-201ENST00000373006 FAM58BPP0C7Q3 252 aa14.01□□□□□ -0.17
USP49-201ENST00000373006 CEACAM7Q14002 265 aa14.01□□□□□ -0.17
USP49-201ENST00000373006 ADGRE1Q14246 886 aa14.01□□□□□ -0.17
USP49-201ENST00000373006 SURF1Q15526 300 aa14.01□□□□□ -0.17
USP49-201ENST00000373006 EML3Q32P44 896 aa14.01□□□□□ -0.17
USP49-201ENST00000373006 NBPF12Q5TAG4 269 aaPredicted RBP14.01□□□□□ -0.17
USP49-201ENST00000373006 JADE1Q6IE81 842 aa14.01□□□□□ -0.17
USP49-201ENST00000373006 MPZL3Q6UWV2 235 aa14.01□□□□□ -0.17
USP49-201ENST00000373006 PYROXD2Q8N2H3 581 aa14.01□□□□□ -0.17
USP49-201ENST00000373006 DCLK2Q8N568 766 aa14.01□□□□□ -0.17
USP49-201ENST00000373006 COLGALT1Q8NBJ5 622 aa14.01□□□□□ -0.17
USP49-201ENST00000373006 GRIN3AQ8TCU5 1115 aa14.01□□□□□ -0.17
USP49-201ENST00000373006 MRPS26Q9BYN8 205 aaKnown RBP14.01□□□□□ -0.17
USP49-201ENST00000373006 SEMA6AQ9H2E6 1030 aa14.01□□□□□ -0.17
USP49-201ENST00000373006 FAM96AQ9H5X1 160 aa14.01□□□□□ -0.17
USP49-201ENST00000373006 RPF1Q9H9Y2 349 aaKnown RBP14.01□□□□□ -0.17
USP49-201ENST00000373006 PFDN4Q9NQP4 134 aa14.01□□□□□ -0.17
USP49-201ENST00000373006 RAB26Q9ULW5 256 aa14.01□□□□□ -0.17
USP49-201ENST00000373006 CDY2AQ9Y6F7 541 aa14.01□□□□□ -0.17
USP49-201ENST00000373006 CDY1Q9Y6F8 540 aa14.01□□□□□ -0.17
USP49-201ENST00000373006 LACTBL1A8MY62 500 aa14.01□□□□□ -0.17
USP49-201ENST00000373006 B4GALT4O60513 344 aa14.01□□□□□ -0.17
USP49-201ENST00000373006 USP12O75317 370 aa14.01□□□□□ -0.17
USP49-201ENST00000373006 MAFO75444 373 aaPredicted RBP14.01□□□□□ -0.17
USP49-201ENST00000373006 TFPTP0C1Z6 253 aa14.01□□□□□ -0.17
USP49-201ENST00000373006 MPSTP25325 297 aa14.01□□□□□ -0.17
USP49-201ENST00000373006 CBLBQ13191 982 aa14.01□□□□□ -0.17
USP49-201ENST00000373006 STXBP2Q15833 593 aa14.01□□□□□ -0.17
USP49-201ENST00000373006 NXNQ6DKJ4 435 aa14.01□□□□□ -0.17
USP49-201ENST00000373006 ZBTB8OSQ8IWT0 167 aa14.01□□□□□ -0.17
USP49-201ENST00000373006 TMIGD2Q96BF3 282 aa14.01□□□□□ -0.17
USP49-201ENST00000373006 GCOM2Q9BZD3 368 aaPredicted RBP14.01□□□□□ -0.17
USP49-201ENST00000373006 RIMS3Q9UJD0 308 aa14.01□□□□□ -0.17
USP49-201ENST00000373006 ZNF510Q9Y2H8 683 aa14.01□□□□□ -0.17
USP49-201ENST00000373006 PCDHB12Q9Y5F1 795 aa14.01□□□□□ -0.17
USP49-201ENST00000373006 FOXD2O60548 495 aaPredicted RBP14□□□□□ -0.17
USP49-201ENST00000373006 PFKMP08237 780 aa14□□□□□ -0.17
USP49-201ENST00000373006 THRAP10827 490 aa14□□□□□ -0.17
USP49-201ENST00000373006 VDRP11473 427 aa14□□□□□ -0.17
USP49-201ENST00000373006 SAT1P21673 171 aa14□□□□□ -0.17
USP49-201ENST00000373006 ACAT1P24752 427 aaKnown RBP14□□□□□ -0.17
USP49-201ENST00000373006 CA8P35219 290 aa14□□□□□ -0.17
USP49-201ENST00000373006 DPP6P42658 865 aa14□□□□□ -0.17
USP49-201ENST00000373006 SEMA5AQ13591 1074 aa14□□□□□ -0.17
USP49-201ENST00000373006 HSP90AA5PQ58FG0 334 aa14□□□□□ -0.17
USP49-201ENST00000373006 BNC2Q6ZN30 1099 aaPredicted RBP14□□□□□ -0.17
USP49-201ENST00000373006 NIM1KQ8IY84 436 aa14□□□□□ -0.17
USP49-201ENST00000373006 KBTBD7Q8WVZ9 684 aa14□□□□□ -0.17
USP49-201ENST00000373006 AGAP2Q99490 1192 aa14□□□□□ -0.17
USP49-201ENST00000373006 SERPINI1Q99574 410 aa14□□□□□ -0.17
USP49-201ENST00000373006 NUF2Q9BZD4 464 aa14□□□□□ -0.17
USP49-201ENST00000373006 DTLQ9NZJ0 730 aa14□□□□□ -0.17
USP49-201ENST00000373006 DMTF1Q9Y222 760 aa14□□□□□ -0.17
USP49-201ENST00000373006 CYLC2Q14093 348 aaPredicted RBP14□□□□□ -0.17
USP49-201ENST00000373006 ZNF423Q2M1K9 1284 aa14□□□□□ -0.17
USP49-201ENST00000373006 LSM12Q3MHD2 195 aaKnown RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms