RNA–Protein interactions for RNA: ENST00000372330.3

MMP9-201, Transcript of matrix metallopeptidase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP9, Length 2,336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP9-201ENST00000372330 TBX20Q9UMR3 447 aa18.73■□□□□ 0.59
MMP9-201ENST00000372330 AGTPBP1Q9UPW5 1226 aa18.73■□□□□ 0.59
MMP9-201ENST00000372330 TESPA1A2RU30 521 aaPredicted RBP18.72■□□□□ 0.59
MMP9-201ENST00000372330 CHADO15335 359 aa18.72■□□□□ 0.59
MMP9-201ENST00000372330 NOL3O60936 208 aaKnown RBP18.72■□□□□ 0.59
MMP9-201ENST00000372330 TCF4P15884 667 aa18.72■□□□□ 0.59
MMP9-201ENST00000372330 PROZP22891 400 aa18.72■□□□□ 0.59
MMP9-201ENST00000372330 HARS2P49590 506 aaKnown RBP18.72■□□□□ 0.59
MMP9-201ENST00000372330 NUMBP49757 651 aa18.72■□□□□ 0.59
MMP9-201ENST00000372330 CDH15P55291 814 aa18.72■□□□□ 0.59
MMP9-201ENST00000372330 MS4A2Q01362 244 aa18.72■□□□□ 0.59
MMP9-201ENST00000372330 ITGADQ13349 1161 aa18.72■□□□□ 0.59
MMP9-201ENST00000372330 TNFAIP1Q13829 316 aa18.72■□□□□ 0.59
MMP9-201ENST00000372330 PIGHQ14442 188 aaPredicted RBP18.72■□□□□ 0.59
MMP9-201ENST00000372330 MAP4K3Q8IVH8 894 aa18.72■□□□□ 0.59
MMP9-201ENST00000372330 COLGALT2Q8IYK4 626 aa18.72■□□□□ 0.59
MMP9-201ENST00000372330 ABRAQ8N0Z2 381 aa18.72■□□□□ 0.59
MMP9-201ENST00000372330 SIX6OS1Q8N1H7 587 aa18.72■□□□□ 0.59
MMP9-201ENST00000372330 ATP2A3Q93084 1043 aa18.72■□□□□ 0.59
MMP9-201ENST00000372330 CCDC127Q96BQ5 260 aa18.72■□□□□ 0.59
MMP9-201ENST00000372330 C1orf112Q9NSG2 853 aa18.72■□□□□ 0.59
MMP9-201ENST00000372330 CDY2AQ9Y6F7 541 aa18.72■□□□□ 0.59
MMP9-201ENST00000372330 CDY1Q9Y6F8 540 aa18.72■□□□□ 0.59
MMP9-201ENST00000372330 NFKBIEO00221 500 aa18.72■□□□□ 0.59
MMP9-201ENST00000372330 ZBTB14O43829 449 aa18.72■□□□□ 0.59
MMP9-201ENST00000372330 POLR2EP19388 210 aaKnown RBP18.72■□□□□ 0.59
MMP9-201ENST00000372330 HNRNPFP52597 415 aaKnown RBP18.72■□□□□ 0.59
MMP9-201ENST00000372330 FGD3Q5JSP0 725 aa18.72■□□□□ 0.59
MMP9-201ENST00000372330 ARHGEF16Q5VV41 709 aa18.72■□□□□ 0.59
MMP9-201ENST00000372330 SCARA3Q6AZY7 606 aa18.72■□□□□ 0.59
MMP9-201ENST00000372330 EPGNQ6UW88 154 aa18.72■□□□□ 0.59
MMP9-201ENST00000372330 CFAP36Q96G28 342 aa18.72■□□□□ 0.59
MMP9-201ENST00000372330 SORT1Q99523 831 aa18.72■□□□□ 0.59
MMP9-201ENST00000372330 NPLQ9BXD5 320 aaPredicted RBP18.72■□□□□ 0.59
MMP9-201ENST00000372330 EHD1Q9H4M9 534 aa18.72■□□□□ 0.59
MMP9-201ENST00000372330 ZC3H7BQ9UGR2 993 aaKnown RBP18.72■□□□□ 0.59
MMP9-201ENST00000372330 IFT52Q9Y366 437 aa18.72■□□□□ 0.59
MMP9-201ENST00000372330 SPO11Q9Y5K1 396 aa18.72■□□□□ 0.59
MMP9-201ENST00000372330 BRCA1P38398 1863 aaKnown RBP18.72■□□□□ 0.59
MMP9-201ENST00000372330 CXorf49A8MYA2 514 aaPredicted RBP18.71■□□□□ 0.59
MMP9-201ENST00000372330 EIF3FO00303 357 aaPredicted RBP18.71■□□□□ 0.59
MMP9-201ENST00000372330 ACOT8O14734 319 aa18.71■□□□□ 0.59
MMP9-201ENST00000372330 GLRA3O75311 464 aa18.71■□□□□ 0.59
MMP9-201ENST00000372330 ADSLP30566 484 aaPredicted RBP18.71■□□□□ 0.59
MMP9-201ENST00000372330 NPTX2P47972 431 aa18.71■□□□□ 0.59
MMP9-201ENST00000372330 GALNT2Q10471 571 aa18.71■□□□□ 0.59
MMP9-201ENST00000372330 GRSF1Q12849 480 aaKnown RBP eCLIP18.71■□□□□ 0.59
MMP9-201ENST00000372330 BNIP3Q12983 259 aa18.71■□□□□ 0.59
MMP9-201ENST00000372330 DMP1Q13316 513 aaPredicted RBP18.71■□□□□ 0.59
MMP9-201ENST00000372330 BMPR2Q13873 1038 aa18.71■□□□□ 0.59
MMP9-201ENST00000372330 CEACAM7Q14002 265 aa18.71■□□□□ 0.59
MMP9-201ENST00000372330 SMUG1Q53HV7 270 aa18.71■□□□□ 0.59
MMP9-201ENST00000372330 SLC15A4Q8N697 577 aa18.71■□□□□ 0.59
MMP9-201ENST00000372330 CALCAP01258 141 aa18.71■□□□□ 0.58
MMP9-201ENST00000372330 PTPN1P18031 435 aaKnown RBP18.71■□□□□ 0.58
MMP9-201ENST00000372330 GNL1P36915 607 aaPredicted RBP18.71■□□□□ 0.58
MMP9-201ENST00000372330 IREB2P48200 963 aaKnown RBP18.71■□□□□ 0.58
MMP9-201ENST00000372330 KCNJ11Q14654 390 aa18.71■□□□□ 0.58
MMP9-201ENST00000372330 RFTN1Q14699 578 aaPredicted RBP18.71■□□□□ 0.58
MMP9-201ENST00000372330 AARS2Q5JTZ9 985 aaKnown RBP18.71■□□□□ 0.58
MMP9-201ENST00000372330 UNC45BQ8IWX7 931 aa18.71■□□□□ 0.58
MMP9-201ENST00000372330 RDM1Q8NG50 284 aa18.71■□□□□ 0.58
MMP9-201ENST00000372330 LRRC39Q96DD0 335 aa18.71■□□□□ 0.58
MMP9-201ENST00000372330 WNK4Q96J92 1243 aa18.71■□□□□ 0.58
MMP9-201ENST00000372330 KLHL32Q96NJ5 620 aa18.71■□□□□ 0.58
MMP9-201ENST00000372330 TUBA1CQ9BQE3 449 aa18.71■□□□□ 0.58
MMP9-201ENST00000372330 KIFC3Q9BVG8 833 aa18.71■□□□□ 0.58
MMP9-201ENST00000372330 RPAP3Q9H6T3 665 aaPredicted RBP18.71■□□□□ 0.58
MMP9-201ENST00000372330 MRPL40Q9NQ50 206 aaKnown RBP18.71■□□□□ 0.58
MMP9-201ENST00000372330 HTRA2O43464 458 aaPredicted RBP18.7■□□□□ 0.58
MMP9-201ENST00000372330 MGEA5O60502 916 aa18.7■□□□□ 0.58
MMP9-201ENST00000372330 CST8O60676 142 aa18.7■□□□□ 0.58
MMP9-201ENST00000372330 GCATO75600 419 aa18.7■□□□□ 0.58
MMP9-201ENST00000372330 APOEP02649 317 aa18.7■□□□□ 0.58
MMP9-201ENST00000372330 ERBB2P04626 1255 aa18.7■□□□□ 0.58
MMP9-201ENST00000372330 KPNA1P52294 538 aaPredicted RBP18.7■□□□□ 0.58
MMP9-201ENST00000372330 ABCE1P61221 599 aaKnown RBP18.7■□□□□ 0.58
MMP9-201ENST00000372330 RPL7AP62424 266 aaKnown RBP18.7■□□□□ 0.58
MMP9-201ENST00000372330 TAP1Q03518 808 aa18.7■□□□□ 0.58
MMP9-201ENST00000372330 ENPEPQ07075 957 aa18.7■□□□□ 0.58
MMP9-201ENST00000372330 LSM12Q3MHD2 195 aaKnown RBP18.7■□□□□ 0.58
MMP9-201ENST00000372330 TTC33Q6PID6 262 aaPredicted RBP18.7■□□□□ 0.58
MMP9-201ENST00000372330 SV2AQ7L0J3 742 aa18.7■□□□□ 0.58
MMP9-201ENST00000372330 THNSL1Q8IYQ7 743 aa18.7■□□□□ 0.58
MMP9-201ENST00000372330 FAM47BQ8NA70 645 aa18.7■□□□□ 0.58
MMP9-201ENST00000372330 TOP1MTQ969P6 601 aa18.7■□□□□ 0.58
MMP9-201ENST00000372330 GPRC5DQ9NZD1 345 aa18.7■□□□□ 0.58
MMP9-201ENST00000372330 DCDC2Q9UHG0 476 aa18.7■□□□□ 0.58
MMP9-201ENST00000372330 PACSIN3Q9UKS6 424 aa18.7■□□□□ 0.58
MMP9-201ENST00000372330 J3QRK9 145 aa18.69■□□□□ 0.58
MMP9-201ENST00000372330 GLDCP23378 1020 aa18.69■□□□□ 0.58
MMP9-201ENST00000372330 PSMC1P62191 440 aaKnown RBP18.69■□□□□ 0.58
MMP9-201ENST00000372330 RPL10AP62906 217 aaKnown RBP18.69■□□□□ 0.58
MMP9-201ENST00000372330 NHSL2Q5HYW2 709 aa18.69■□□□□ 0.58
MMP9-201ENST00000372330 MROH9Q5TGP6 573 aa18.69■□□□□ 0.58
MMP9-201ENST00000372330 GPR107Q5VW38 600 aa18.69■□□□□ 0.58
MMP9-201ENST00000372330 MAMDC4Q6UXC1 1216 aa18.69■□□□□ 0.58
MMP9-201ENST00000372330 MYO1HQ8N1T3 1032 aa18.69■□□□□ 0.58
MMP9-201ENST00000372330 TAB3Q8N5C8 712 aaPredicted RBP18.69■□□□□ 0.58
MMP9-201ENST00000372330 FAM71DQ8N9W8 422 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms