RNA–Protein interactions for RNA: ENST00000372067.7

VEGFA-205, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 3,535 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-205ENST00000372067 SDR42E2A6NKP2 422 aa17.5■□□□□ 0.39
VEGFA-205ENST00000372067 EDF1O60869 148 aaKnown RBP17.5■□□□□ 0.39
VEGFA-205ENST00000372067 ENDOD1O94919 500 aa17.5■□□□□ 0.39
VEGFA-205ENST00000372067 JCHAINP01591 159 aa17.5■□□□□ 0.39
VEGFA-205ENST00000372067 CCNFP41002 786 aa17.5■□□□□ 0.39
VEGFA-205ENST00000372067 ITKQ08881 620 aa17.5■□□□□ 0.39
VEGFA-205ENST00000372067 CHI3L2Q15782 390 aa17.5■□□□□ 0.39
VEGFA-205ENST00000372067 C16orf46Q6P387 395 aa17.5■□□□□ 0.39
VEGFA-205ENST00000372067 ALKAL1Q6UXT8 129 aa17.5■□□□□ 0.39
VEGFA-205ENST00000372067 CAND1Q86VP6 1230 aaKnown RBP17.5■□□□□ 0.39
VEGFA-205ENST00000372067 AGO3Q9H9G7 860 aaKnown RBP17.5■□□□□ 0.39
VEGFA-205ENST00000372067 INIPQ9NRY2 104 aa17.5■□□□□ 0.39
VEGFA-205ENST00000372067 TRIP12Q14669 1992 aaPredicted RBP17.5■□□□□ 0.39
VEGFA-205ENST00000372067 CBX6O95503 412 aa17.5■□□□□ 0.39
VEGFA-205ENST00000372067 SERPINB4P48594 390 aa17.5■□□□□ 0.39
VEGFA-205ENST00000372067 TIGD5Q53EQ6 642 aa17.5■□□□□ 0.39
VEGFA-205ENST00000372067 SPATA2LQ8IUW3 424 aaPredicted RBP17.5■□□□□ 0.39
VEGFA-205ENST00000372067 PGLYRP2Q96PD5 576 aa17.5■□□□□ 0.39
VEGFA-205ENST00000372067 TRAPPC9Q96Q05 1148 aa17.5■□□□□ 0.39
VEGFA-205ENST00000372067 BFARQ9NZS9 450 aa17.5■□□□□ 0.39
VEGFA-205ENST00000372067 GABRQQ9UN88 632 aa17.5■□□□□ 0.39
VEGFA-205ENST00000372067 LOC285556D6RIA3 1793 aa17.5■□□□□ 0.39
VEGFA-205ENST00000372067 DICER1Q9UPY3 1922 aaKnown RBP17.5■□□□□ 0.39
VEGFA-205ENST00000372067 C2orf71A6NGG8 1288 aa17.5■□□□□ 0.39
VEGFA-205ENST00000372067 CSH1P0DML2 217 aa17.5■□□□□ 0.39
VEGFA-205ENST00000372067 CSH2P0DML3 217 aa17.5■□□□□ 0.39
VEGFA-205ENST00000372067 HOXD8P13378 290 aaPredicted RBP17.5■□□□□ 0.39
VEGFA-205ENST00000372067 VAV1P15498 845 aa17.5■□□□□ 0.39
VEGFA-205ENST00000372067 ADRA1BP35368 520 aa17.5■□□□□ 0.39
VEGFA-205ENST00000372067 FDFT1P37268 417 aa17.5■□□□□ 0.39
VEGFA-205ENST00000372067 GALNTL6Q49A17 601 aa17.5■□□□□ 0.39
VEGFA-205ENST00000372067 ZCCHC23Q6ZST2 131 aa17.5■□□□□ 0.39
VEGFA-205ENST00000372067 LMNTD2Q8IXW0 634 aa17.5■□□□□ 0.39
VEGFA-205ENST00000372067 STKLD1Q8NE28 680 aa17.5■□□□□ 0.39
VEGFA-205ENST00000372067 OR52K1Q8NGK4 314 aa17.5■□□□□ 0.39
VEGFA-205ENST00000372067 QKIQ96PU8 341 aaKnown RBP eCLIP17.5■□□□□ 0.39
VEGFA-205ENST00000372067 FAM124BQ9H5Z6 455 aaPredicted RBP17.5■□□□□ 0.39
VEGFA-205ENST00000372067 HEY2Q9UBP5 337 aa17.5■□□□□ 0.39
VEGFA-205ENST00000372067 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.49■□□□□ 0.39
VEGFA-205ENST00000372067 E7ESA3 106 aa17.49■□□□□ 0.39
VEGFA-205ENST00000372067 TM9SF1O15321 606 aa17.49■□□□□ 0.39
VEGFA-205ENST00000372067 ASGR1P07306 291 aa17.49■□□□□ 0.39
VEGFA-205ENST00000372067 TYK2P29597 1187 aa17.49■□□□□ 0.39
VEGFA-205ENST00000372067 OVOS1Q6IE37 1185 aa17.49■□□□□ 0.39
VEGFA-205ENST00000372067 GPRIN1Q7Z2K8 1008 aa17.49■□□□□ 0.39
VEGFA-205ENST00000372067 APLFQ8IW19 511 aaPredicted RBP17.49■□□□□ 0.39
VEGFA-205ENST00000372067 TMCO1Q9UM00 188 aa17.49■□□□□ 0.39
VEGFA-205ENST00000372067 GOLGA8TH3BQL2 631 aa17.49■□□□□ 0.39
VEGFA-205ENST00000372067 OR4Q2P0C623 313 aa17.49■□□□□ 0.39
VEGFA-205ENST00000372067 ERVK-10P10266 1014 aa17.49■□□□□ 0.39
VEGFA-205ENST00000372067 OR1G1P47890 313 aa17.49■□□□□ 0.39
VEGFA-205ENST00000372067 TAF1BQ53T94 588 aaPredicted RBP17.49■□□□□ 0.39
VEGFA-205ENST00000372067 SDHAF4Q5VUM1 108 aa17.49■□□□□ 0.39
VEGFA-205ENST00000372067 ASRGL1Q7L266 308 aa17.49■□□□□ 0.39
VEGFA-205ENST00000372067 SMARCD1Q96GM5 515 aa17.49■□□□□ 0.39
VEGFA-205ENST00000372067 SMOQ99835 787 aa17.49■□□□□ 0.39
VEGFA-205ENST00000372067 OXCT2Q9BYC2 517 aaPredicted RBP17.49■□□□□ 0.39
VEGFA-205ENST00000372067 PPARGC1AQ9UBK2 798 aaKnown RBP17.49■□□□□ 0.39
VEGFA-205ENST00000372067 SAPCD2Q86UD0 394 aa17.48■□□□□ 0.39
VEGFA-205ENST00000372067 ARID3BQ8IVW6 561 aaPredicted RBP17.48■□□□□ 0.39
VEGFA-205ENST00000372067 BRD8Q9H0E9 1235 aa17.48■□□□□ 0.39
VEGFA-205ENST00000372067 GTF2IRD1Q9UHL9 959 aa17.48■□□□□ 0.39
VEGFA-205ENST00000372067 FAM72CH0Y354 149 aa17.48■□□□□ 0.39
VEGFA-205ENST00000372067 TYROBPO43914 113 aa17.48■□□□□ 0.39
VEGFA-205ENST00000372067 FBXO21O94952 628 aa17.48■□□□□ 0.39
VEGFA-205ENST00000372067 FAM72AQ5TYM5 149 aa17.48■□□□□ 0.39
VEGFA-205ENST00000372067 FAM72DQ6L9T8 149 aa17.48■□□□□ 0.39
VEGFA-205ENST00000372067 C4orf22Q6V702 233 aa17.48■□□□□ 0.39
VEGFA-205ENST00000372067 FAM72BQ86X60 149 aa17.48■□□□□ 0.39
VEGFA-205ENST00000372067 BANPQ8N9N5 519 aa17.48■□□□□ 0.39
VEGFA-205ENST00000372067 RFWD2Q8NHY2 731 aa17.48■□□□□ 0.39
VEGFA-205ENST00000372067 MCUR1Q96AQ8 359 aa17.48■□□□□ 0.39
VEGFA-205ENST00000372067 OR12D3Q9UGF7 316 aa17.48■□□□□ 0.39
VEGFA-205ENST00000372067 STARD13Q9Y3M8 1113 aa17.48■□□□□ 0.39
VEGFA-205ENST00000372067 GMEB1Q9Y692 573 aa17.48■□□□□ 0.39
VEGFA-205ENST00000372067 A0A0G2JMZ2 1700 aa17.48■□□□□ 0.39
VEGFA-205ENST00000372067 HAUS5O94927 633 aa17.48■□□□□ 0.39
VEGFA-205ENST00000372067 ETS2P15036 469 aa17.48■□□□□ 0.39
VEGFA-205ENST00000372067 DAOAP59103 153 aa17.48■□□□□ 0.39
VEGFA-205ENST00000372067 KCNA10Q16322 511 aa17.48■□□□□ 0.39
VEGFA-205ENST00000372067 RAPH1Q70E73 1250 aa17.48■□□□□ 0.39
VEGFA-205ENST00000372067 SMYD2Q9NRG4 433 aa17.48■□□□□ 0.39
VEGFA-205ENST00000372067 MTMR10Q9NXD2 777 aa17.48■□□□□ 0.39
VEGFA-205ENST00000372067 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.47■□□□□ 0.39
VEGFA-205ENST00000372067 TOP3BO95985 862 aaKnown RBP17.47■□□□□ 0.39
VEGFA-205ENST00000372067 ERFP50548 548 aa17.47■□□□□ 0.39
VEGFA-205ENST00000372067 SEPT6Q14141 434 aa17.47■□□□□ 0.39
VEGFA-205ENST00000372067 PRPSAP1Q14558 356 aa17.47■□□□□ 0.39
VEGFA-205ENST00000372067 CNPY1Q3B7I2 92 aa17.47■□□□□ 0.39
VEGFA-205ENST00000372067 CGB2Q6NT52 195 aa17.47■□□□□ 0.39
VEGFA-205ENST00000372067 C3orf58Q8NDZ4 430 aa17.47■□□□□ 0.39
VEGFA-205ENST00000372067 DENND1AQ8TEH3 1009 aa17.47■□□□□ 0.39
VEGFA-205ENST00000372067 E2F7Q96AV8 911 aa17.47■□□□□ 0.39
VEGFA-205ENST00000372067 RAB3IPQ96QF0 476 aaPredicted RBP17.47■□□□□ 0.39
VEGFA-205ENST00000372067 TRMT13Q9NUP7 481 aaKnown RBP17.47■□□□□ 0.39
VEGFA-205ENST00000372067 H0Y3Z8 333 aa17.47■□□□□ 0.39
VEGFA-205ENST00000372067 HAS3O00219 553 aa17.47■□□□□ 0.39
VEGFA-205ENST00000372067 PEX11AO75192 247 aa17.47■□□□□ 0.39
VEGFA-205ENST00000372067 GCATO75600 419 aa17.47■□□□□ 0.39
VEGFA-205ENST00000372067 TPBGLP0DKB5 382 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms