RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 EZRP15311 586 aaKnown RBP12.04□□□□□ -0.48
PDE6C-201ENST00000371447 PTPN3P26045 913 aa12.04□□□□□ -0.48
PDE6C-201ENST00000371447 LHX1P48742 406 aa12.04□□□□□ -0.48
PDE6C-201ENST00000371447 CAP1Q01518 475 aa12.04□□□□□ -0.48
PDE6C-201ENST00000371447 FASTKD1Q53R41 847 aaKnown RBP12.04□□□□□ -0.48
PDE6C-201ENST00000371447 BTBD8Q5XKL5 378 aa12.04□□□□□ -0.48
PDE6C-201ENST00000371447 RFWD3Q6PCD5 774 aa12.04□□□□□ -0.48
PDE6C-201ENST00000371447 SLC25A41Q8N5S1 370 aa12.04□□□□□ -0.48
PDE6C-201ENST00000371447 POU5F2Q8N7G0 328 aa12.04□□□□□ -0.48
PDE6C-201ENST00000371447 ACVR1CQ8NER5 493 aa12.04□□□□□ -0.48
PDE6C-201ENST00000371447 UTP4Q969X6 686 aaKnown RBP12.04□□□□□ -0.48
PDE6C-201ENST00000371447 MCUR1Q96AQ8 359 aa12.04□□□□□ -0.48
PDE6C-201ENST00000371447 ALKBH8Q96BT7 664 aaKnown RBP12.04□□□□□ -0.48
PDE6C-201ENST00000371447 SGF29Q96ES7 293 aa12.04□□□□□ -0.48
PDE6C-201ENST00000371447 OXNAD1Q96HP4 312 aaPredicted RBP12.04□□□□□ -0.48
PDE6C-201ENST00000371447 VANGL2Q9ULK5 521 aa12.04□□□□□ -0.48
PDE6C-201ENST00000371447 SLC27A5Q9Y2P5 690 aa12.04□□□□□ -0.48
PDE6C-201ENST00000371447 PCDHA11Q9Y5I1 949 aa12.04□□□□□ -0.48
PDE6C-201ENST00000371447 CCL22O00626 93 aa12.04□□□□□ -0.48
PDE6C-201ENST00000371447 DGKIO75912 1065 aa12.04□□□□□ -0.48
PDE6C-201ENST00000371447 T-ENOLP0DO92 83 aa12.04□□□□□ -0.48
PDE6C-201ENST00000371447 ESRRAP11474 423 aaPredicted RBP12.04□□□□□ -0.48
PDE6C-201ENST00000371447 MAXP61244 160 aa12.04□□□□□ -0.48
PDE6C-201ENST00000371447 ATP2A3Q93084 1043 aa12.04□□□□□ -0.48
PDE6C-201ENST00000371447 SMARCD1Q96GM5 515 aa12.04□□□□□ -0.48
PDE6C-201ENST00000371447 WDR6Q9NNW5 1121 aaKnown RBP12.04□□□□□ -0.48
PDE6C-201ENST00000371447 BFARQ9NZS9 450 aa12.04□□□□□ -0.48
PDE6C-201ENST00000371447 FNDC3AQ9Y2H6 1198 aaKnown RBP12.04□□□□□ -0.48
PDE6C-201ENST00000371447 FIS1Q9Y3D6 152 aa12.04□□□□□ -0.48
PDE6C-201ENST00000371447 USP3Q9Y6I4 520 aa12.04□□□□□ -0.48
PDE6C-201ENST00000371447 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.04□□□□□ -0.48
PDE6C-201ENST00000371447 MEI4A8MW99 385 aa12.04□□□□□ -0.48
PDE6C-201ENST00000371447 GPR182O15218 404 aa12.04□□□□□ -0.48
PDE6C-201ENST00000371447 PHGDHO43175 533 aaKnown RBP12.04□□□□□ -0.48
PDE6C-201ENST00000371447 MGRN1O60291 552 aa12.04□□□□□ -0.48
PDE6C-201ENST00000371447 SLC4A1P02730 911 aa12.04□□□□□ -0.48
PDE6C-201ENST00000371447 PCSK1P29120 753 aa12.04□□□□□ -0.48
PDE6C-201ENST00000371447 ETV4P43268 484 aa12.04□□□□□ -0.48
PDE6C-201ENST00000371447 NEK3P51956 506 aa12.04□□□□□ -0.48
PDE6C-201ENST00000371447 PEX6Q13608 980 aa12.04□□□□□ -0.48
PDE6C-201ENST00000371447 PACS1Q6VY07 963 aa12.04□□□□□ -0.48
PDE6C-201ENST00000371447 BZW1Q7L1Q6 419 aaKnown RBP12.04□□□□□ -0.48
PDE6C-201ENST00000371447 RNF135Q8IUD6 432 aa12.04□□□□□ -0.48
PDE6C-201ENST00000371447 SPATA2LQ8IUW3 424 aaPredicted RBP12.04□□□□□ -0.48
PDE6C-201ENST00000371447 ZNF276Q8N554 614 aa12.04□□□□□ -0.48
PDE6C-201ENST00000371447 TTC9BQ8N6N2 239 aa12.04□□□□□ -0.48
PDE6C-201ENST00000371447 EFCAB3Q8N7B9 438 aa12.04□□□□□ -0.48
PDE6C-201ENST00000371447 ATAD1Q8NBU5 361 aa12.04□□□□□ -0.48
PDE6C-201ENST00000371447 DQX1Q8TE96 717 aaKnown RBP12.04□□□□□ -0.48
PDE6C-201ENST00000371447 MAN1C1Q9NR34 630 aa12.04□□□□□ -0.48
PDE6C-201ENST00000371447 SLC39A10Q9ULF5 831 aa12.04□□□□□ -0.48
PDE6C-201ENST00000371447 LOC100653049A0A140TA62 436 aa12.03□□□□□ -0.48
PDE6C-201ENST00000371447 FCHO1O14526 889 aa12.03□□□□□ -0.48
PDE6C-201ENST00000371447 GYG2O15488 501 aa12.03□□□□□ -0.48
PDE6C-201ENST00000371447 B4GALT3O60512 393 aa12.03□□□□□ -0.48
PDE6C-201ENST00000371447 KRT34O76011 436 aa12.03□□□□□ -0.48
PDE6C-201ENST00000371447 ALDOAP04075 364 aaKnown RBP12.03□□□□□ -0.48
PDE6C-201ENST00000371447 POLBP06746 335 aa12.03□□□□□ -0.48
PDE6C-201ENST00000371447 ETFBP38117 255 aa12.03□□□□□ -0.48
PDE6C-201ENST00000371447 IRF9Q00978 393 aa12.03□□□□□ -0.48
PDE6C-201ENST00000371447 STX3Q13277 289 aa12.03□□□□□ -0.48
PDE6C-201ENST00000371447 SEMA5AQ13591 1074 aa12.03□□□□□ -0.48
PDE6C-201ENST00000371447 UBAP2LQ14157 1087 aaKnown RBP12.03□□□□□ -0.48
PDE6C-201ENST00000371447 ZNF460Q14592 562 aa12.03□□□□□ -0.48
PDE6C-201ENST00000371447 UPP1Q16831 310 aa12.03□□□□□ -0.48
PDE6C-201ENST00000371447 EPAS1Q99814 870 aa12.03□□□□□ -0.48
PDE6C-201ENST00000371447 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.03□□□□□ -0.48
PDE6C-201ENST00000371447 CFAP73A6NFT4 308 aa12.03□□□□□ -0.48
PDE6C-201ENST00000371447 SMAPO00193 183 aa12.03□□□□□ -0.48
PDE6C-201ENST00000371447 GABRDO14764 452 aa12.03□□□□□ -0.48
PDE6C-201ENST00000371447 BUD23O43709 281 aaKnown RBP12.03□□□□□ -0.48
PDE6C-201ENST00000371447 SPAG6O75602 509 aa12.03□□□□□ -0.48
PDE6C-201ENST00000371447 ANP32DO95626 131 aa12.03□□□□□ -0.48
PDE6C-201ENST00000371447 ITGA2BP08514 1039 aa12.03□□□□□ -0.48
PDE6C-201ENST00000371447 ODC1P11926 461 aa12.03□□□□□ -0.48
PDE6C-201ENST00000371447 CHRNA4P43681 627 aa12.03□□□□□ -0.48
PDE6C-201ENST00000371447 ITGA9Q13797 1035 aa12.03□□□□□ -0.48
PDE6C-201ENST00000371447 PDE1CQ14123 709 aaPredicted RBP12.03□□□□□ -0.48
PDE6C-201ENST00000371447 HIPK4Q8NE63 616 aa12.03□□□□□ -0.48
PDE6C-201ENST00000371447 FBXO27Q8NI29 283 aa12.03□□□□□ -0.48
PDE6C-201ENST00000371447 ARNTL2Q8WYA1 636 aa12.03□□□□□ -0.48
PDE6C-201ENST00000371447 CLPTM1LQ96KA5 538 aa12.03□□□□□ -0.48
PDE6C-201ENST00000371447 RTP3Q9BQQ7 232 aa12.03□□□□□ -0.48
PDE6C-201ENST00000371447 TMEM216Q9P0N5 145 aa12.03□□□□□ -0.48
PDE6C-201ENST00000371447 NKX1-2Q9UD57 310 aaPredicted RBP12.03□□□□□ -0.48
PDE6C-201ENST00000371447 FBXW11Q9UKB1 542 aa12.03□□□□□ -0.48
PDE6C-201ENST00000371447 DNAJC16Q9Y2G8 782 aa12.03□□□□□ -0.48
PDE6C-201ENST00000371447 OPHN1O60890 802 aa12.03□□□□□ -0.48
PDE6C-201ENST00000371447 NCF2P19878 526 aaPredicted RBP12.03□□□□□ -0.48
PDE6C-201ENST00000371447 LRPAP1P30533 357 aa12.03□□□□□ -0.48
PDE6C-201ENST00000371447 GATMP50440 423 aa12.03□□□□□ -0.48
PDE6C-201ENST00000371447 SATB1Q01826 763 aa12.03□□□□□ -0.48
PDE6C-201ENST00000371447 RASA2Q15283 850 aa12.03□□□□□ -0.48
PDE6C-201ENST00000371447 CIR1Q86X95 450 aaPredicted RBP12.03□□□□□ -0.48
PDE6C-201ENST00000371447 CRLF3Q8IUI8 442 aa12.03□□□□□ -0.48
PDE6C-201ENST00000371447 C10orf107Q8IVU9 208 aa12.03□□□□□ -0.48
PDE6C-201ENST00000371447 PABPC5Q96DU9 382 aaKnown RBP12.03□□□□□ -0.48
PDE6C-201ENST00000371447 RTP4Q96DX8 246 aa12.03□□□□□ -0.48
PDE6C-201ENST00000371447 SCYL1Q96KG9 808 aa12.03□□□□□ -0.48
PDE6C-201ENST00000371447 OLFM3Q96PB7 478 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms