RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 TFAP2DQ7Z6R9 452 aa17.26■□□□□ 0.35
PHGDH-202ENST00000369409 KREMEN2Q8NCW0 462 aa17.26■□□□□ 0.35
PHGDH-202ENST00000369409 PRMT1Q99873 361 aaKnown RBP17.26■□□□□ 0.35
PHGDH-202ENST00000369409 ZYG11BQ9C0D3 744 aa17.26■□□□□ 0.35
PHGDH-202ENST00000369409 IL21Q9HBE4 155 aa17.26■□□□□ 0.35
PHGDH-202ENST00000369409 CHD7Q9P2D1 2997 aa17.26■□□□□ 0.35
PHGDH-202ENST00000369409 OPHN1O60890 802 aa17.25■□□□□ 0.35
PHGDH-202ENST00000369409 IRF1P10914 325 aa17.25■□□□□ 0.35
PHGDH-202ENST00000369409 MAGEA4P43358 317 aa17.25■□□□□ 0.35
PHGDH-202ENST00000369409 PPP3CCP48454 512 aa17.25■□□□□ 0.35
PHGDH-202ENST00000369409 ARL4CP56559 192 aa17.25■□□□□ 0.35
PHGDH-202ENST00000369409 PDIA2Q13087 525 aaKnown RBP17.25■□□□□ 0.35
PHGDH-202ENST00000369409 MTM1Q13496 603 aa17.25■□□□□ 0.35
PHGDH-202ENST00000369409 HP1BP3Q5SSJ5 553 aaPredicted RBP17.25■□□□□ 0.35
PHGDH-202ENST00000369409 FNBP1LQ5T0N5 605 aa17.25■□□□□ 0.35
PHGDH-202ENST00000369409 FBXL22Q6P050 247 aa17.25■□□□□ 0.35
PHGDH-202ENST00000369409 CCDC149Q6ZUS6 474 aa17.25■□□□□ 0.35
PHGDH-202ENST00000369409 CENPUQ71F23 418 aa17.25■□□□□ 0.35
PHGDH-202ENST00000369409 NLRP14Q86W24 1093 aa17.25■□□□□ 0.35
PHGDH-202ENST00000369409 RELL1Q8IUW5 271 aa17.25■□□□□ 0.35
PHGDH-202ENST00000369409 ZNF567Q8N184 647 aa17.25■□□□□ 0.35
PHGDH-202ENST00000369409 ATPAF2Q8N5M1 289 aa17.25■□□□□ 0.35
PHGDH-202ENST00000369409 LZTR1Q8N653 840 aa17.25■□□□□ 0.35
PHGDH-202ENST00000369409 MRPL43Q8N983 215 aaKnown RBP17.25■□□□□ 0.35
PHGDH-202ENST00000369409 IGSF8Q969P0 613 aa17.25■□□□□ 0.35
PHGDH-202ENST00000369409 BRD8Q9H0E9 1235 aa17.25■□□□□ 0.35
PHGDH-202ENST00000369409 RNF38Q9H0F5 515 aa17.25■□□□□ 0.35
PHGDH-202ENST00000369409 LRRC4CQ9HCJ2 640 aa17.25■□□□□ 0.35
PHGDH-202ENST00000369409 TRPC7Q9HCX4 862 aa17.25■□□□□ 0.35
PHGDH-202ENST00000369409 PPARGC1AQ9UBK2 798 aaKnown RBP17.25■□□□□ 0.35
PHGDH-202ENST00000369409 DOCK6Q96HP0 2047 aa17.25■□□□□ 0.35
PHGDH-202ENST00000369409 HELZP42694 1942 aaKnown RBP17.25■□□□□ 0.35
PHGDH-202ENST00000369409 IGLV3-10A0A075B6K4 115 aa17.24■□□□□ 0.35
PHGDH-202ENST00000369409 GOLGA6L7A0A1B0GV03 622 aa17.24■□□□□ 0.35
PHGDH-202ENST00000369409 WASH4PA8MWX3 477 aa17.24■□□□□ 0.35
PHGDH-202ENST00000369409 C5orf67F2Z3F1 127 aa17.24■□□□□ 0.35
PHGDH-202ENST00000369409 POLR3GO15318 223 aaPredicted RBP17.24■□□□□ 0.35
PHGDH-202ENST00000369409 ZNF189O75820 626 aaPredicted RBP17.24■□□□□ 0.35
PHGDH-202ENST00000369409 CNTN5O94779 1100 aa17.24■□□□□ 0.35
PHGDH-202ENST00000369409 TTC4O95801 387 aa17.24■□□□□ 0.35
PHGDH-202ENST00000369409 F11P03951 625 aa17.24■□□□□ 0.35
PHGDH-202ENST00000369409 CA3P07451 260 aa17.24■□□□□ 0.35
PHGDH-202ENST00000369409 APRTP07741 180 aa17.24■□□□□ 0.35
PHGDH-202ENST00000369409 RHOQP17081 205 aa17.24■□□□□ 0.35
PHGDH-202ENST00000369409 PTPN3P26045 913 aa17.24■□□□□ 0.35
PHGDH-202ENST00000369409 COG7P83436 770 aa17.24■□□□□ 0.35
PHGDH-202ENST00000369409 ALFQ53S48 1182 aa17.24■□□□□ 0.35
PHGDH-202ENST00000369409 ARHGAP36Q6ZRI8 547 aa17.24■□□□□ 0.35
PHGDH-202ENST00000369409 CIR1Q86X95 450 aaPredicted RBP17.24■□□□□ 0.35
PHGDH-202ENST00000369409 CCDC13Q8IYE1 715 aa17.24■□□□□ 0.35
PHGDH-202ENST00000369409 ZBED8Q8IZ13 594 aa17.24■□□□□ 0.35
PHGDH-202ENST00000369409 ARL8AQ96BM9 186 aa17.24■□□□□ 0.35
PHGDH-202ENST00000369409 PLD4Q96BZ4 506 aa17.24■□□□□ 0.35
PHGDH-202ENST00000369409 RPRD1AQ96P16 312 aaPredicted RBP17.24■□□□□ 0.35
PHGDH-202ENST00000369409 ASB3Q9Y575 518 aa17.24■□□□□ 0.35
PHGDH-202ENST00000369409 MYO7AQ13402 2215 aa17.24■□□□□ 0.35
PHGDH-202ENST00000369409 GRM6O15303 877 aa17.24■□□□□ 0.35
PHGDH-202ENST00000369409 TACR2P21452 398 aa17.24■□□□□ 0.35
PHGDH-202ENST00000369409 GABRR2P28476 465 aa17.24■□□□□ 0.35
PHGDH-202ENST00000369409 HARS2P49590 506 aaKnown RBP17.24■□□□□ 0.35
PHGDH-202ENST00000369409 EIF3BP55884 814 aaKnown RBP17.24■□□□□ 0.35
PHGDH-202ENST00000369409 UBE3AQ05086 875 aa17.24■□□□□ 0.35
PHGDH-202ENST00000369409 MTA1Q13330 715 aa17.24■□□□□ 0.35
PHGDH-202ENST00000369409 MSS51Q4VC12 460 aa17.24■□□□□ 0.35
PHGDH-202ENST00000369409 TTMPQ5BVD1 217 aa17.24■□□□□ 0.35
PHGDH-202ENST00000369409 MICAL1Q8TDZ2 1067 aa17.24■□□□□ 0.35
PHGDH-202ENST00000369409 EXOC4Q96A65 974 aa17.24■□□□□ 0.35
PHGDH-202ENST00000369409 MYEOVQ96EZ4 313 aa17.24■□□□□ 0.35
PHGDH-202ENST00000369409 SLC39A8Q9C0K1 460 aa17.24■□□□□ 0.35
PHGDH-202ENST00000369409 GKN1Q9NS71 199 aa17.24■□□□□ 0.35
PHGDH-202ENST00000369409 TMEM248Q9NWD8 314 aa17.24■□□□□ 0.35
PHGDH-202ENST00000369409 KLHL8Q9P2G9 620 aaPredicted RBP17.24■□□□□ 0.35
PHGDH-202ENST00000369409 CLUHO75153 1309 aa17.24■□□□□ 0.35
PHGDH-202ENST00000369409 CHD9Q3L8U1 2897 aa17.23■□□□□ 0.35
PHGDH-202ENST00000369409 GOLGA6L10A6NI86 522 aa17.23■□□□□ 0.35
PHGDH-202ENST00000369409 GOLGA8KD6RF30 607 aa17.23■□□□□ 0.35
PHGDH-202ENST00000369409 ACSL4O60488 711 aa17.23■□□□□ 0.35
PHGDH-202ENST00000369409 LPXNO60711 386 aa17.23■□□□□ 0.35
PHGDH-202ENST00000369409 STC2O76061 302 aa17.23■□□□□ 0.35
PHGDH-202ENST00000369409 MBL2P11226 248 aaPredicted RBP17.23■□□□□ 0.35
PHGDH-202ENST00000369409 PSMB4P28070 264 aa17.23■□□□□ 0.35
PHGDH-202ENST00000369409 CORO1AP31146 461 aaKnown RBP17.23■□□□□ 0.35
PHGDH-202ENST00000369409 IRS1P35568 1242 aa17.23■□□□□ 0.35
PHGDH-202ENST00000369409 MAGEA6P43360 314 aa17.23■□□□□ 0.35
PHGDH-202ENST00000369409 MAGEA10P43363 369 aaPredicted RBP17.23■□□□□ 0.35
PHGDH-202ENST00000369409 CLCN4P51793 760 aa17.23■□□□□ 0.35
PHGDH-202ENST00000369409 CYP4F8P98187 520 aa17.23■□□□□ 0.35
PHGDH-202ENST00000369409 ZBTB17Q13105 803 aa17.23■□□□□ 0.35
PHGDH-202ENST00000369409 SEMA5AQ13591 1074 aa17.23■□□□□ 0.35
PHGDH-202ENST00000369409 KRT71Q3SY84 523 aa17.23■□□□□ 0.35
PHGDH-202ENST00000369409 ACBD5Q5T8D3 534 aaPredicted RBP17.23■□□□□ 0.35
PHGDH-202ENST00000369409 TMC8Q8IU68 726 aa17.23■□□□□ 0.35
PHGDH-202ENST00000369409 ANKMY2Q8IV38 441 aa17.23■□□□□ 0.35
PHGDH-202ENST00000369409 DENND1CQ8IV53 801 aa17.23■□□□□ 0.35
PHGDH-202ENST00000369409 HS6ST3Q8IZP7 471 aa17.23■□□□□ 0.35
PHGDH-202ENST00000369409 PDIK1LQ8N165 341 aa17.23■□□□□ 0.35
PHGDH-202ENST00000369409 SLC22A17Q8WUG5 538 aa17.23■□□□□ 0.35
PHGDH-202ENST00000369409 SLC22A12Q96S37 553 aa17.23■□□□□ 0.35
PHGDH-202ENST00000369409 PHACTR1Q9C0D0 580 aa17.23■□□□□ 0.35
PHGDH-202ENST00000369409 SMPD4Q9NXE4 827 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms