RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 WDR4P57081 412 aaKnown RBP10.95□□□□□ -0.66
TPM3-212ENST00000368533 FAM189BP81408 668 aa10.95□□□□□ -0.66
TPM3-212ENST00000368533 POLNQ7Z5Q5 900 aa10.95□□□□□ -0.66
TPM3-212ENST00000368533 PQLC3Q8N755 202 aa10.95□□□□□ -0.66
TPM3-212ENST00000368533 ZFAND2BQ8WV99 257 aa10.95□□□□□ -0.66
TPM3-212ENST00000368533 ZNF333Q96JL9 665 aa10.95□□□□□ -0.66
TPM3-212ENST00000368533 YIPF2Q9BWQ6 316 aa10.95□□□□□ -0.66
TPM3-212ENST00000368533 DMAP1Q9NPF5 467 aaPredicted RBP10.95□□□□□ -0.66
TPM3-212ENST00000368533 XPO7Q9UIA9 1087 aaKnown RBP10.95□□□□□ -0.66
TPM3-212ENST00000368533 CDY1Q9Y6F8 540 aa10.95□□□□□ -0.66
TPM3-212ENST00000368533 GALTP07902 379 aa10.95□□□□□ -0.66
TPM3-212ENST00000368533 TAC1P20366 129 aa10.95□□□□□ -0.66
TPM3-212ENST00000368533 RPA3P35244 121 aaPredicted RBP10.95□□□□□ -0.66
TPM3-212ENST00000368533 SLC10A2Q12908 348 aaPredicted RBP10.95□□□□□ -0.66
TPM3-212ENST00000368533 DUSP4Q13115 394 aa10.95□□□□□ -0.66
TPM3-212ENST00000368533 RASIP1Q5U651 963 aa10.95□□□□□ -0.66
TPM3-212ENST00000368533 ANKRD22Q5VYY1 191 aa10.95□□□□□ -0.66
TPM3-212ENST00000368533 FUT10Q6P4F1 479 aa10.95□□□□□ -0.66
TPM3-212ENST00000368533 RNF19BQ6ZMZ0 732 aa10.95□□□□□ -0.66
TPM3-212ENST00000368533 C3orf62Q6ZUJ4 267 aa10.95□□□□□ -0.66
TPM3-212ENST00000368533 FAM13CQ8NE31 585 aa10.95□□□□□ -0.66
TPM3-212ENST00000368533 DTX3LQ8TDB6 740 aa10.95□□□□□ -0.66
TPM3-212ENST00000368533 STK32AQ8WU08 396 aa10.95□□□□□ -0.66
TPM3-212ENST00000368533 RNF157Q96PX1 679 aa10.95□□□□□ -0.66
TPM3-212ENST00000368533 NMUR1Q9HB89 426 aa10.95□□□□□ -0.66
TPM3-212ENST00000368533 LGALS13Q9UHV8 139 aa10.95□□□□□ -0.66
TPM3-212ENST00000368533 CHD9Q3L8U1 2897 aa10.95□□□□□ -0.66
TPM3-212ENST00000368533 VWA8A3KMH1 1905 aa10.95□□□□□ -0.66
TPM3-212ENST00000368533 TRIM43BA6NCK2 446 aa10.95□□□□□ -0.66
TPM3-212ENST00000368533 KCNN4O15554 427 aa10.95□□□□□ -0.66
TPM3-212ENST00000368533 KRT4P19013 534 aa10.95□□□□□ -0.66
TPM3-212ENST00000368533 FUT4P22083 530 aa10.95□□□□□ -0.66
TPM3-212ENST00000368533 RBL1P28749 1068 aa10.95□□□□□ -0.66
TPM3-212ENST00000368533 L1CAMP32004 1257 aa10.95□□□□□ -0.66
TPM3-212ENST00000368533 INHBCP55103 352 aa10.95□□□□□ -0.66
TPM3-212ENST00000368533 SNX16P57768 344 aa10.95□□□□□ -0.66
TPM3-212ENST00000368533 MORF4L2Q15014 288 aa10.95□□□□□ -0.66
TPM3-212ENST00000368533 EFTUD2Q15029 972 aaKnown RBP eCLIP10.95□□□□□ -0.662e-18■■■■□ 20.8
TPM3-212ENST00000368533 FAM171BQ6P995 826 aa10.95□□□□□ -0.66
TPM3-212ENST00000368533 TAC4Q86UU9 113 aa10.95□□□□□ -0.66
TPM3-212ENST00000368533 TRABD2AQ86V40 505 aa10.95□□□□□ -0.66
TPM3-212ENST00000368533 MIB1Q86YT6 1006 aa10.95□□□□□ -0.66
TPM3-212ENST00000368533 NPAS4Q8IUM7 802 aa10.95□□□□□ -0.66
TPM3-212ENST00000368533 PLD5Q8N7P1 536 aa10.95□□□□□ -0.66
TPM3-212ENST00000368533 GBP7Q8N8V2 638 aaPredicted RBP10.95□□□□□ -0.66
TPM3-212ENST00000368533 CCDC110Q8TBZ0 833 aa10.95□□□□□ -0.66
TPM3-212ENST00000368533 TRIM43Q96BQ3 446 aaPredicted RBP10.95□□□□□ -0.66
TPM3-212ENST00000368533 LGMNQ99538 433 aa10.95□□□□□ -0.66
TPM3-212ENST00000368533 DNAI2Q9GZS0 605 aa10.95□□□□□ -0.66
TPM3-212ENST00000368533 NMRK1Q9NWW6 199 aa10.95□□□□□ -0.66
TPM3-212ENST00000368533 A0A1W2PQH9 124 aa10.94□□□□□ -0.66
TPM3-212ENST00000368533 PITPNM1O00562 1244 aa10.94□□□□□ -0.66
TPM3-212ENST00000368533 MCF2LO15068 1137 aa10.94□□□□□ -0.66
TPM3-212ENST00000368533 TCEA3O75764 348 aa10.94□□□□□ -0.66
TPM3-212ENST00000368533 SYN1P17600 705 aa10.94□□□□□ -0.66
TPM3-212ENST00000368533 DESP17661 470 aa10.94□□□□□ -0.66
TPM3-212ENST00000368533 ALDH7A1P49419 539 aaKnown RBP10.94□□□□□ -0.66
TPM3-212ENST00000368533 CCNG1P51959 295 aa10.94□□□□□ -0.66
TPM3-212ENST00000368533 ARL4CP56559 192 aa10.94□□□□□ -0.66
TPM3-212ENST00000368533 SLC25A52Q3SY17 297 aa10.94□□□□□ -0.66
TPM3-212ENST00000368533 RFX8Q6ZV50 586 aa10.94□□□□□ -0.66
TPM3-212ENST00000368533 BBS12Q6ZW61 710 aa10.94□□□□□ -0.66
TPM3-212ENST00000368533 MAML1Q92585 1016 aa10.94□□□□□ -0.66
TPM3-212ENST00000368533 ERP27Q96DN0 273 aa10.94□□□□□ -0.66
TPM3-212ENST00000368533 FOXP3Q9BZS1 431 aa10.94□□□□□ -0.66
TPM3-212ENST00000368533 C12orf65Q9H3J6 166 aaKnown RBP10.94□□□□□ -0.66
TPM3-212ENST00000368533 OSER1Q9NX31 292 aa10.94□□□□□ -0.66
TPM3-212ENST00000368533 MTMR10Q9NXD2 777 aa10.94□□□□□ -0.66
TPM3-212ENST00000368533 PHTF1Q9UMS5 762 aa10.94□□□□□ -0.66
TPM3-212ENST00000368533 PCDHB8Q9UN66 801 aa10.94□□□□□ -0.66
TPM3-212ENST00000368533 IKBKGQ9Y6K9 419 aa10.94□□□□□ -0.66
TPM3-212ENST00000368533 APOL1O14791 398 aa10.94□□□□□ -0.66
TPM3-212ENST00000368533 IMPDH2P12268 514 aa10.94□□□□□ -0.66
TPM3-212ENST00000368533 RAG1P15918 1043 aa10.94□□□□□ -0.66
TPM3-212ENST00000368533 OASLQ15646 514 aaKnown RBP10.94□□□□□ -0.66
TPM3-212ENST00000368533 KIAA1841Q6NSI8 718 aa10.94□□□□□ -0.66
TPM3-212ENST00000368533 RWDD4Q6NW29 188 aaKnown RBP10.94□□□□□ -0.66
TPM3-212ENST00000368533 CCNYQ8ND76 341 aa10.94□□□□□ -0.66
TPM3-212ENST00000368533 VWCEQ96DN2 955 aa10.94□□□□□ -0.66
TPM3-212ENST00000368533 CELF6Q96J87 481 aaKnown RBP10.94□□□□□ -0.66
TPM3-212ENST00000368533 CSPG4P5Q96PW8 444 aa10.94□□□□□ -0.66
TPM3-212ENST00000368533 TSPAN18Q96SJ8 248 aa10.94□□□□□ -0.66
TPM3-212ENST00000368533 TKTL2Q9H0I9 626 aa10.94□□□□□ -0.66
TPM3-212ENST00000368533 RXFP1Q9HBX9 757 aa10.94□□□□□ -0.66
TPM3-212ENST00000368533 SQORQ9Y6N5 450 aa10.94□□□□□ -0.66
TPM3-212ENST00000368533 AVILO75366 819 aa10.93□□□□□ -0.66
TPM3-212ENST00000368533 CBX6O95503 412 aa10.93□□□□□ -0.66
TPM3-212ENST00000368533 CLTBP09497 229 aa10.93□□□□□ -0.66
TPM3-212ENST00000368533 NOS2P35228 1153 aa10.93□□□□□ -0.66
TPM3-212ENST00000368533 PHBP35232 272 aa10.93□□□□□ -0.66
TPM3-212ENST00000368533 NR1H3Q13133 447 aa10.93□□□□□ -0.66
TPM3-212ENST00000368533 IKBKEQ14164 716 aa10.93□□□□□ -0.66
TPM3-212ENST00000368533 BOLA3Q53S33 107 aa10.93□□□□□ -0.66
TPM3-212ENST00000368533 RNASEH2BQ5TBB1 312 aaKnown RBP10.93□□□□□ -0.66
TPM3-212ENST00000368533 RFWD3Q6PCD5 774 aa10.93□□□□□ -0.66
TPM3-212ENST00000368533 LVRNQ6Q4G3 990 aa10.93□□□□□ -0.66
TPM3-212ENST00000368533 BHLHA9Q7RTU4 235 aa10.93□□□□□ -0.66
TPM3-212ENST00000368533 MAP7D3Q8IWC1 876 aa10.93□□□□□ -0.66
TPM3-212ENST00000368533 MYLK2Q9H1R3 596 aa10.93□□□□□ -0.66
TPM3-212ENST00000368533 PCDH9Q9HC56 1237 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms