RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 ANTXRLA6NF34 631 aa14.3□□□□□ -0.12
TPM3-211ENST00000368531 FAM170BA6NMN3 283 aa14.3□□□□□ -0.12
TPM3-211ENST00000368531 USP27XA6NNY8 438 aa14.3□□□□□ -0.12
TPM3-211ENST00000368531 H3BRJ5 948 aa14.3□□□□□ -0.12
TPM3-211ENST00000368531 CLDN11O75508 207 aa14.3□□□□□ -0.12
TPM3-211ENST00000368531 KAT7O95251 611 aa14.3□□□□□ -0.12
TPM3-211ENST00000368531 KRT1P04264 644 aa14.3□□□□□ -0.12
TPM3-211ENST00000368531 CD48P09326 243 aa14.3□□□□□ -0.12
TPM3-211ENST00000368531 AMPD1P23109 780 aa14.3□□□□□ -0.12
TPM3-211ENST00000368531 TARSP26639 723 aaKnown RBP14.3□□□□□ -0.12
TPM3-211ENST00000368531 HLA-FP30511 346 aa14.3□□□□□ -0.12
TPM3-211ENST00000368531 OR1E1P30953 314 aa14.3□□□□□ -0.12
TPM3-211ENST00000368531 ARL4AP40617 200 aa14.3□□□□□ -0.12
TPM3-211ENST00000368531 MARCKSL1P49006 195 aa14.3□□□□□ -0.12
TPM3-211ENST00000368531 DNA2P51530 1060 aa14.3□□□□□ -0.12
TPM3-211ENST00000368531 SEC13P55735 322 aa14.3□□□□□ -0.12
TPM3-211ENST00000368531 GRSF1Q12849 480 aaKnown RBP eCLIP14.3□□□□□ -0.12
TPM3-211ENST00000368531 LMAN2Q12907 356 aa14.3□□□□□ -0.12
TPM3-211ENST00000368531 LLGL1Q15334 1064 aa14.3□□□□□ -0.12
TPM3-211ENST00000368531 DPYSL2Q16555 572 aa14.3□□□□□ -0.12
TPM3-211ENST00000368531 GEN1Q17RS7 908 aa14.3□□□□□ -0.12
TPM3-211ENST00000368531 TMEM196Q5HYL7 178 aa14.3□□□□□ -0.12
TPM3-211ENST00000368531 ZNF662Q6ZS27 426 aa14.3□□□□□ -0.12
TPM3-211ENST00000368531 CHST9Q7L1S5 443 aa14.3□□□□□ -0.12
TPM3-211ENST00000368531 NT5DC3Q86UY8 548 aa14.3□□□□□ -0.12
TPM3-211ENST00000368531 OR52K2Q8NGK3 314 aa14.3□□□□□ -0.12
TPM3-211ENST00000368531 FIBINQ8TAL6 211 aa14.3□□□□□ -0.12
TPM3-211ENST00000368531 RAPGEF5Q92565 580 aa14.3□□□□□ -0.12
TPM3-211ENST00000368531 KRT35Q92764 455 aa14.3□□□□□ -0.12
TPM3-211ENST00000368531 EXOC4Q96A65 974 aa14.3□□□□□ -0.12
TPM3-211ENST00000368531 RNF25Q96BH1 459 aaPredicted RBP14.3□□□□□ -0.12
TPM3-211ENST00000368531 MSANTD3Q96H12 275 aa14.3□□□□□ -0.12
TPM3-211ENST00000368531 SLC2A11Q9BYW1 496 aa14.3□□□□□ -0.12
TPM3-211ENST00000368531 CATSPERBQ9H7T0 1116 aa14.3□□□□□ -0.12
TPM3-211ENST00000368531 LTB4R2Q9NPC1 389 aa14.3□□□□□ -0.12
TPM3-211ENST00000368531 RBM12Q9NTZ6 932 aaKnown RBP14.3□□□□□ -0.12
TPM3-211ENST00000368531 PPARGC1AQ9UBK2 798 aaKnown RBP14.3□□□□□ -0.12
TPM3-211ENST00000368531 FBXO10Q9UK96 956 aa14.3□□□□□ -0.12
TPM3-211ENST00000368531 MRPS17Q9Y2R5 130 aaKnown RBP14.3□□□□□ -0.12
TPM3-211ENST00000368531 UNC80Q8N2C7 3258 aa14.3□□□□□ -0.12
TPM3-211ENST00000368531 NUP205Q92621 2012 aa14.29□□□□□ -0.12
TPM3-211ENST00000368531 RHOCP08134 193 aa14.29□□□□□ -0.12
TPM3-211ENST00000368531 PABPC1P11940 636 aaKnown RBP14.29□□□□□ -0.12
TPM3-211ENST00000368531 RHOQP17081 205 aa14.29□□□□□ -0.12
TPM3-211ENST00000368531 KDELR1P24390 212 aa14.29□□□□□ -0.12
TPM3-211ENST00000368531 MZF1P28698 734 aaPredicted RBP14.29□□□□□ -0.12
TPM3-211ENST00000368531 EIF2DP41214 584 aaKnown RBP14.29□□□□□ -0.12
TPM3-211ENST00000368531 CSKP41240 450 aa14.29□□□□□ -0.12
TPM3-211ENST00000368531 ARSEP51690 589 aa14.29□□□□□ -0.12
TPM3-211ENST00000368531 EMC10Q5UCC4 262 aa14.29□□□□□ -0.12
TPM3-211ENST00000368531 RNF219Q5W0B1 726 aaPredicted RBP14.29□□□□□ -0.12
TPM3-211ENST00000368531 CXorf57Q6NSI4 855 aaKnown RBP14.29□□□□□ -0.12
TPM3-211ENST00000368531 RFX8Q6ZV50 586 aa14.29□□□□□ -0.12
TPM3-211ENST00000368531 POLNQ7Z5Q5 900 aa14.29□□□□□ -0.12
TPM3-211ENST00000368531 APCDD1Q8J025 514 aa14.29□□□□□ -0.12
TPM3-211ENST00000368531 PHTF2Q8N3S3 785 aa14.29□□□□□ -0.12
TPM3-211ENST00000368531 TERB1Q8NA31 727 aa14.29□□□□□ -0.12
TPM3-211ENST00000368531 NETO2Q8NC67 525 aa14.29□□□□□ -0.12
TPM3-211ENST00000368531 MUC3BQ9H195 1237 aa14.29□□□□□ -0.12
TPM3-211ENST00000368531 LMAN1LQ9HAT1 526 aa14.29□□□□□ -0.12
TPM3-211ENST00000368531 ZDHHC4Q9NPG8 344 aa14.29□□□□□ -0.12
TPM3-211ENST00000368531 NDFIP2Q9NV92 336 aa14.29□□□□□ -0.12
TPM3-211ENST00000368531 DDX56Q9NY93 547 aaKnown RBP14.29□□□□□ -0.12
TPM3-211ENST00000368531 KIAA1522Q9P206 1035 aaPredicted RBP14.29□□□□□ -0.12
TPM3-211ENST00000368531 GGA2Q9UJY4 613 aa14.29□□□□□ -0.12
TPM3-211ENST00000368531 NEU3Q9UQ49 428 aa14.29□□□□□ -0.12
TPM3-211ENST00000368531 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.29□□□□□ -0.12
TPM3-211ENST00000368531 FAM86C2PA6NEL3 165 aa14.28□□□□□ -0.12
TPM3-211ENST00000368531 PRRT4C9JH25 899 aa14.28□□□□□ -0.12
TPM3-211ENST00000368531 PSTPIP1O43586 416 aa14.28□□□□□ -0.12
TPM3-211ENST00000368531 ERCC2P18074 760 aa14.28□□□□□ -0.12
TPM3-211ENST00000368531 DRD1P21728 446 aa14.28□□□□□ -0.12
TPM3-211ENST00000368531 GRIA2P42262 883 aa14.28□□□□□ -0.12
TPM3-211ENST00000368531 DPYSL3Q14195 570 aa14.28□□□□□ -0.12
TPM3-211ENST00000368531 PDK2Q15119 407 aa14.28□□□□□ -0.12
TPM3-211ENST00000368531 PREPLQ4J6C6 727 aaPredicted RBP14.28□□□□□ -0.12
TPM3-211ENST00000368531 LRRC38Q5VT99 294 aa14.28□□□□□ -0.12
TPM3-211ENST00000368531 C1orf228Q6PIY5 440 aa14.28□□□□□ -0.12
TPM3-211ENST00000368531 NUDT18Q6ZVK8 323 aa14.28□□□□□ -0.12
TPM3-211ENST00000368531 ANKS1BQ7Z6G8 1248 aa14.28□□□□□ -0.12
TPM3-211ENST00000368531 NLRP14Q86W24 1093 aa14.28□□□□□ -0.12
TPM3-211ENST00000368531 MAP7D3Q8IWC1 876 aa14.28□□□□□ -0.12
TPM3-211ENST00000368531 C17orf53Q8N3J3 647 aaPredicted RBP14.28□□□□□ -0.12
TPM3-211ENST00000368531 RTL3Q8N8U3 475 aaKnown RBP14.28□□□□□ -0.12
TPM3-211ENST00000368531 SORCS1Q8WY21 1168 aa14.28□□□□□ -0.12
TPM3-211ENST00000368531 EZH1Q92800 747 aaPredicted RBP14.28□□□□□ -0.12
TPM3-211ENST00000368531 PBXIP1Q96AQ6 731 aa14.28□□□□□ -0.12
TPM3-211ENST00000368531 CSPG4P5Q96PW8 444 aa14.28□□□□□ -0.12
TPM3-211ENST00000368531 ALS2CR12Q96Q35 445 aa14.28□□□□□ -0.12
TPM3-211ENST00000368531 SPON2Q9BUD6 331 aa14.28□□□□□ -0.12
TPM3-211ENST00000368531 CIPCQ9C0C6 399 aa14.28□□□□□ -0.12
TPM3-211ENST00000368531 TMEM248Q9NWD8 314 aa14.28□□□□□ -0.12
TPM3-211ENST00000368531 MFHAS1Q9Y4C4 1052 aa14.28□□□□□ -0.12
TPM3-211ENST00000368531 A0A0D9SEW6 157 aa14.27□□□□□ -0.13
TPM3-211ENST00000368531 K7EQS6 105 aa14.27□□□□□ -0.13
TPM3-211ENST00000368531 FGF10O15520 208 aaPredicted RBP14.27□□□□□ -0.13
TPM3-211ENST00000368531 DCNP07585 359 aaKnown RBP14.27□□□□□ -0.13
TPM3-211ENST00000368531 CHRNB1P11230 501 aa14.27□□□□□ -0.13
TPM3-211ENST00000368531 IL4RP24394 825 aa14.27□□□□□ -0.13
TPM3-211ENST00000368531 HOXC13P31276 330 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms