RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 JOSD2Q8TAC2 188 aa10.34□□□□□ -0.75
TPM3-210ENST00000368530 MYCBPAPQ8TBZ2 947 aa10.34□□□□□ -0.75
TPM3-210ENST00000368530 IPO4Q8TEX9 1081 aaKnown RBP10.34□□□□□ -0.75
TPM3-210ENST00000368530 C18orf8Q96DM3 657 aa10.34□□□□□ -0.75
TPM3-210ENST00000368530 FAM124BQ9H5Z6 455 aaPredicted RBP10.34□□□□□ -0.75
TPM3-210ENST00000368530 TMEM74BQ9NUR3 256 aa10.34□□□□□ -0.75
TPM3-210ENST00000368530 HESX1Q9UBX0 185 aa10.34□□□□□ -0.75
TPM3-210ENST00000368530 DMGDHQ9UI17 866 aaKnown RBP10.34□□□□□ -0.75
TPM3-210ENST00000368530 AKAP13Q12802 2813 aa10.34□□□□□ -0.75
TPM3-210ENST00000368530 ZNF638Q14966 1978 aaKnown RBP10.34□□□□□ -0.75
TPM3-210ENST00000368530 E5RJQ4 531 aa10.33□□□□□ -0.76
TPM3-210ENST00000368530 F8VP50 259 aa10.33□□□□□ -0.76
TPM3-210ENST00000368530 SGK1O00141 431 aa10.33□□□□□ -0.76
TPM3-210ENST00000368530 KHNYNO15037 678 aaKnown RBP10.33□□□□□ -0.76
TPM3-210ENST00000368530 RAD51CO43502 376 aa10.33□□□□□ -0.76
TPM3-210ENST00000368530 ADAM23O75077 832 aa10.33□□□□□ -0.76
TPM3-210ENST00000368530 KRT3P12035 628 aa10.33□□□□□ -0.76
TPM3-210ENST00000368530 TCF4P15884 667 aa10.33□□□□□ -0.76
TPM3-210ENST00000368530 SPINK2P20155 84 aa10.33□□□□□ -0.76
TPM3-210ENST00000368530 CSRP1P21291 193 aaKnown RBP10.33□□□□□ -0.76
TPM3-210ENST00000368530 GBP1P32455 592 aa10.33□□□□□ -0.76
TPM3-210ENST00000368530 GRIK1P39086 918 aa10.33□□□□□ -0.76
TPM3-210ENST00000368530 MRPS21P82921 87 aaKnown RBP10.33□□□□□ -0.76
TPM3-210ENST00000368530 ZNF252P-AS1Q0IIN9 211 aa10.33□□□□□ -0.76
TPM3-210ENST00000368530 STILQ15468 1287 aa10.33□□□□□ -0.76
TPM3-210ENST00000368530 FAM102AQ5T9C2 384 aaPredicted RBP10.33□□□□□ -0.76
TPM3-210ENST00000368530 C11orf74Q86VG3 221 aa10.33□□□□□ -0.76
TPM3-210ENST00000368530 TTC30AQ86WT1 665 aa10.33□□□□□ -0.76
TPM3-210ENST00000368530 ALLCQ8N6M5 410 aa10.33□□□□□ -0.76
TPM3-210ENST00000368530 EMC1Q8N766 993 aa10.33□□□□□ -0.76
TPM3-210ENST00000368530 KDF1Q8NAX2 398 aaPredicted RBP10.33□□□□□ -0.76
TPM3-210ENST00000368530 CCDC26Q8TAB7 109 aa10.33□□□□□ -0.76
TPM3-210ENST00000368530 RLN3Q8WXF3 142 aa10.33□□□□□ -0.76
TPM3-210ENST00000368530 ZFRQ96KR1 1074 aaKnown RBP10.33□□□□□ -0.76
TPM3-210ENST00000368530 C8orf48Q96LL4 319 aa10.33□□□□□ -0.76
TPM3-210ENST00000368530 ARFGAP3Q9NP61 516 aa10.33□□□□□ -0.76
TPM3-210ENST00000368530 KLHL11Q9NVR0 708 aa10.33□□□□□ -0.76
TPM3-210ENST00000368530 TRPM5Q9NZQ8 1165 aa10.33□□□□□ -0.76
TPM3-210ENST00000368530 MBD1Q9UIS9 605 aaPredicted RBP10.33□□□□□ -0.76
TPM3-210ENST00000368530 TMEM59LQ9UK28 342 aa10.33□□□□□ -0.76
TPM3-210ENST00000368530 HCN2Q9UL51 889 aa10.33□□□□□ -0.76
TPM3-210ENST00000368530 TTC7AQ9ULT0 858 aaPredicted RBP10.33□□□□□ -0.76
TPM3-210ENST00000368530 CPQQ9Y646 472 aa10.33□□□□□ -0.76
TPM3-210ENST00000368530 TCRBV7S2A1N4TA0A589 114 aa10.33□□□□□ -0.76
TPM3-210ENST00000368530 CCDC151A5D8V7 595 aa10.33□□□□□ -0.76
TPM3-210ENST00000368530 ZSCAN5CA6NGD5 496 aaPredicted RBP10.33□□□□□ -0.76
TPM3-210ENST00000368530 SCAMP3O14828 347 aaKnown RBP10.33□□□□□ -0.76
TPM3-210ENST00000368530 ERLIN1O75477 346 aa10.33□□□□□ -0.76
TPM3-210ENST00000368530 HEXIM1O94992 359 aaKnown RBP10.33□□□□□ -0.76
TPM3-210ENST00000368530 FAM163BP0C2L3 166 aa10.33□□□□□ -0.76
TPM3-210ENST00000368530 CEACAM1P13688 526 aa10.33□□□□□ -0.76
TPM3-210ENST00000368530 PSMA2P25787 234 aa10.33□□□□□ -0.76
TPM3-210ENST00000368530 MAN1A1P33908 653 aa10.33□□□□□ -0.76
TPM3-210ENST00000368530 RFC1P35251 1148 aaPredicted RBP10.33□□□□□ -0.76
TPM3-210ENST00000368530 EIF2DP41214 584 aaKnown RBP10.33□□□□□ -0.76
TPM3-210ENST00000368530 PTGER3P43115 390 aa10.33□□□□□ -0.76
TPM3-210ENST00000368530 PPP3CCP48454 512 aa10.33□□□□□ -0.76
TPM3-210ENST00000368530 GUCY2DQ02846 1103 aa10.33□□□□□ -0.76
TPM3-210ENST00000368530 PDE4CQ08493 712 aa10.33□□□□□ -0.76
TPM3-210ENST00000368530 TAF10Q12962 218 aa10.33□□□□□ -0.76
TPM3-210ENST00000368530 MAPRE1Q15691 268 aaKnown RBP10.33□□□□□ -0.76
TPM3-210ENST00000368530 MAP7D1Q3KQU3 841 aa10.33□□□□□ -0.76
TPM3-210ENST00000368530 ZFYVE27Q5T4F4 411 aa10.33□□□□□ -0.76
TPM3-210ENST00000368530 WDR93Q6P2C0 686 aa10.33□□□□□ -0.76
TPM3-210ENST00000368530 UNQ6494/PRO21346Q6UXR6 183 aa10.33□□□□□ -0.76
TPM3-210ENST00000368530 FAM183BPQ6ZVS7 135 aa10.33□□□□□ -0.76
TPM3-210ENST00000368530 CCDC50Q8IVM0 306 aa10.33□□□□□ -0.76
TPM3-210ENST00000368530 RHOT1Q8IXI2 618 aa10.33□□□□□ -0.76
TPM3-210ENST00000368530 TXNDC5Q8NBS9 432 aaKnown RBP10.33□□□□□ -0.76
TPM3-210ENST00000368530 SLC2A14Q8TDB8 520 aa10.33□□□□□ -0.76
TPM3-210ENST00000368530 GATA6Q92908 595 aa10.33□□□□□ -0.76
TPM3-210ENST00000368530 NAP1L3Q99457 506 aaPredicted RBP10.33□□□□□ -0.76
TPM3-210ENST00000368530 TMEM9BQ9NQ34 198 aa10.33□□□□□ -0.76
TPM3-210ENST00000368530 STIM2Q9P246 746 aa10.33□□□□□ -0.76
TPM3-210ENST00000368530 EVLQ9UI08 416 aaPredicted RBP10.33□□□□□ -0.76
TPM3-210ENST00000368530 ZMIZ1Q9ULJ6 1067 aa10.33□□□□□ -0.76
TPM3-210ENST00000368530 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.33□□□□□ -0.76
TPM3-210ENST00000368530 IGF2RP11717 2491 aa10.32□□□□□ -0.76
TPM3-210ENST00000368530 PTPRDP23468 1912 aa10.32□□□□□ -0.76
TPM3-210ENST00000368530 GOLGA6L10A0A0M3HER8 536 aa10.32□□□□□ -0.76
TPM3-210ENST00000368530 ESYT3A0FGR9 886 aa10.32□□□□□ -0.76
TPM3-210ENST00000368530 SIGLEC16A6NMB1 481 aa10.32□□□□□ -0.76
TPM3-210ENST00000368530 CCDC188H7C350 402 aa10.32□□□□□ -0.76
TPM3-210ENST00000368530 TNFRSF10BO14763 440 aa10.32□□□□□ -0.76
TPM3-210ENST00000368530 TRIM66O15016 1216 aa10.32□□□□□ -0.76
TPM3-210ENST00000368530 GRAP2O75791 330 aa10.32□□□□□ -0.76
TPM3-210ENST00000368530 KAT7O95251 611 aa10.32□□□□□ -0.76
TPM3-210ENST00000368530 GLI1P08151 1106 aa10.32□□□□□ -0.76
TPM3-210ENST00000368530 MYBL2P10244 700 aa10.32□□□□□ -0.76
TPM3-210ENST00000368530 PTPN1P18031 435 aaKnown RBP10.32□□□□□ -0.76
TPM3-210ENST00000368530 MCM3P25205 808 aa10.32□□□□□ -0.76
TPM3-210ENST00000368530 GABRB2P47870 512 aa10.32□□□□□ -0.76
TPM3-210ENST00000368530 ATP13A4Q4VNC1 1196 aa10.32□□□□□ -0.76
TPM3-210ENST00000368530 GLE1Q53GS7 698 aaKnown RBP10.32□□□□□ -0.76
TPM3-210ENST00000368530 MDH1BQ5I0G3 518 aa10.32□□□□□ -0.76
TPM3-210ENST00000368530 ARHGAP17Q68EM7 881 aa10.32□□□□□ -0.76
TPM3-210ENST00000368530 PMF1Q6P1K2 205 aa10.32□□□□□ -0.76
TPM3-210ENST00000368530 PAQR9Q6ZVX9 377 aa10.32□□□□□ -0.76
TPM3-210ENST00000368530 CYP2U1Q7Z449 544 aa10.32□□□□□ -0.76
TPM3-210ENST00000368530 MTERF4Q7Z6M4 381 aaKnown RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms