RNA–Protein interactions for RNA: ENST00000368202.4

PTPRK-201, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 526 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-201ENST00000368202 TBL1XO60907 577 aa12.52□□□□□ -0.41
PTPRK-201ENST00000368202 CLDN11O75508 207 aa12.52□□□□□ -0.41
PTPRK-201ENST00000368202 NEBLO76041 1014 aa12.52□□□□□ -0.41
PTPRK-201ENST00000368202 MAP3K6O95382 1288 aa12.52□□□□□ -0.41
PTPRK-201ENST00000368202 ITGAVP06756 1048 aa12.52□□□□□ -0.41
PTPRK-201ENST00000368202 MCM3P25205 808 aa12.52□□□□□ -0.41
PTPRK-201ENST00000368202 KCNJ1P48048 391 aa12.52□□□□□ -0.41
PTPRK-201ENST00000368202 IFNAR2P48551 515 aa12.52□□□□□ -0.41
PTPRK-201ENST00000368202 NDST2P52849 883 aa12.52□□□□□ -0.41
PTPRK-201ENST00000368202 GBE1Q04446 702 aa12.52□□□□□ -0.41
PTPRK-201ENST00000368202 AP1B1Q10567 949 aa12.52□□□□□ -0.41
PTPRK-201ENST00000368202 ZNF177Q13360 481 aaPredicted RBP12.52□□□□□ -0.41
PTPRK-201ENST00000368202 ZNF77Q15935 545 aa12.52□□□□□ -0.41
PTPRK-201ENST00000368202 C6orf118Q5T5N4 469 aa12.52□□□□□ -0.41
PTPRK-201ENST00000368202 TIGD7Q6NT04 549 aaPredicted RBP12.52□□□□□ -0.41
PTPRK-201ENST00000368202 GPR153Q6NV75 609 aa12.52□□□□□ -0.41
PTPRK-201ENST00000368202 SYDE1Q6ZW31 735 aaPredicted RBP12.52□□□□□ -0.41
PTPRK-201ENST00000368202 CHST9Q7L1S5 443 aa12.52□□□□□ -0.41
PTPRK-201ENST00000368202 BBS7Q8IWZ6 715 aa12.52□□□□□ -0.41
PTPRK-201ENST00000368202 ZNF683Q8IZ20 524 aa12.52□□□□□ -0.41
PTPRK-201ENST00000368202 CFAP52Q8N1V2 620 aa12.52□□□□□ -0.41
PTPRK-201ENST00000368202 CCDC89Q8N998 374 aa12.52□□□□□ -0.41
PTPRK-201ENST00000368202 CCHCR1Q8TD31 782 aa12.52□□□□□ -0.41
PTPRK-201ENST00000368202 MYLIPQ8WY64 445 aa12.52□□□□□ -0.41
PTPRK-201ENST00000368202 SMARCD2Q92925 531 aa12.52□□□□□ -0.41
PTPRK-201ENST00000368202 NKD2Q969F2 451 aaPredicted RBP12.52□□□□□ -0.41
PTPRK-201ENST00000368202 WBP2Q969T9 261 aa12.52□□□□□ -0.41
PTPRK-201ENST00000368202 OTUB2Q96DC9 234 aa12.52□□□□□ -0.41
PTPRK-201ENST00000368202 ZSWIM3Q96MP5 696 aa12.52□□□□□ -0.41
PTPRK-201ENST00000368202 BRD8Q9H0E9 1235 aa12.52□□□□□ -0.41
PTPRK-201ENST00000368202 S1PR5Q9H228 398 aa12.52□□□□□ -0.41
PTPRK-201ENST00000368202 DTLQ9NZJ0 730 aa12.52□□□□□ -0.41
PTPRK-201ENST00000368202 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.52□□□□□ -0.41
PTPRK-201ENST00000368202 CCL26Q9Y258 94 aa12.52□□□□□ -0.41
PTPRK-201ENST00000368202 V9GYY5 206 aaPredicted RBP12.52□□□□□ -0.41
PTPRK-201ENST00000368202 DENND4AQ7Z401 1863 aa12.52□□□□□ -0.41
PTPRK-201ENST00000368202 DOCK4Q8N1I0 1966 aa12.52□□□□□ -0.41
PTPRK-201ENST00000368202 TTI1O43156 1089 aa12.51□□□□□ -0.41
PTPRK-201ENST00000368202 RAD51CO43502 376 aa12.51□□□□□ -0.41
PTPRK-201ENST00000368202 RAMP2O60895 175 aa12.51□□□□□ -0.41
PTPRK-201ENST00000368202 CNTN5O94779 1100 aa12.51□□□□□ -0.41
PTPRK-201ENST00000368202 HEXIM1O94992 359 aaKnown RBP12.51□□□□□ -0.41
PTPRK-201ENST00000368202 PRAMEF12O95522 483 aa12.51□□□□□ -0.41
PTPRK-201ENST00000368202 RHOCP08134 193 aa12.51□□□□□ -0.41
PTPRK-201ENST00000368202 FOSL2P15408 326 aa12.51□□□□□ -0.41
PTPRK-201ENST00000368202 STIP1P31948 543 aaKnown RBP12.51□□□□□ -0.41
PTPRK-201ENST00000368202 ETFBP38117 255 aa12.51□□□□□ -0.41
PTPRK-201ENST00000368202 ZXDBP98169 803 aa12.51□□□□□ -0.41
PTPRK-201ENST00000368202 DLX2Q07687 328 aaPredicted RBP12.51□□□□□ -0.41
PTPRK-201ENST00000368202 CDH18Q13634 790 aa12.51□□□□□ -0.41
PTPRK-201ENST00000368202 CCDC85BQ15834 202 aaPredicted RBP12.51□□□□□ -0.41
PTPRK-201ENST00000368202 ERCC6LQ2NKX8 1250 aa12.51□□□□□ -0.41
PTPRK-201ENST00000368202 C5orf22Q49AR2 442 aa12.51□□□□□ -0.41
PTPRK-201ENST00000368202 ALFQ53S48 1182 aa12.51□□□□□ -0.41
PTPRK-201ENST00000368202 SLC45A4Q5BKX6 768 aa12.51□□□□□ -0.41
PTPRK-201ENST00000368202 TTC27Q6P3X3 843 aa12.51□□□□□ -0.41
PTPRK-201ENST00000368202 TPGS1Q6ZTW0 290 aa12.51□□□□□ -0.41
PTPRK-201ENST00000368202 CIR1Q86X95 450 aaPredicted RBP12.51□□□□□ -0.41
PTPRK-201ENST00000368202 YAF2Q8IY57 180 aa12.51□□□□□ -0.41
PTPRK-201ENST00000368202 ZDHHC14Q8IZN3 488 aa12.51□□□□□ -0.41
PTPRK-201ENST00000368202 CARNMT1Q8N4J0 409 aa12.51□□□□□ -0.41
PTPRK-201ENST00000368202 ATPAF2Q8N5M1 289 aa12.51□□□□□ -0.41
PTPRK-201ENST00000368202 KIAA1958Q8N8K9 716 aa12.51□□□□□ -0.41
PTPRK-201ENST00000368202 SLC35B2Q8TB61 432 aa12.51□□□□□ -0.41
PTPRK-201ENST00000368202 BPIFB1Q8TDL5 484 aa12.51□□□□□ -0.41
PTPRK-201ENST00000368202 NSMCE1Q8WV22 266 aa12.51□□□□□ -0.41
PTPRK-201ENST00000368202 PPM1EQ8WY54 764 aa12.51□□□□□ -0.41
PTPRK-201ENST00000368202 CELF6Q96J87 481 aaKnown RBP12.51□□□□□ -0.41
PTPRK-201ENST00000368202 MSLNLQ96KJ4 702 aa12.51□□□□□ -0.41
PTPRK-201ENST00000368202 PRICKLE1Q96MT3 831 aaPredicted RBP12.51□□□□□ -0.41
PTPRK-201ENST00000368202 ASB16Q96NS5 453 aa12.51□□□□□ -0.41
PTPRK-201ENST00000368202 TMEM121Q9BTD3 319 aa12.51□□□□□ -0.41
PTPRK-201ENST00000368202 ZFP14Q9HCL3 533 aa12.51□□□□□ -0.41
PTPRK-201ENST00000368202 DUS2Q9NX74 493 aaKnown RBP12.51□□□□□ -0.41
PTPRK-201ENST00000368202 OBP2AQ9NY56 170 aa12.51□□□□□ -0.41
PTPRK-201ENST00000368202 ASIC3Q9UHC3 531 aa12.51□□□□□ -0.41
PTPRK-201ENST00000368202 MFHAS1Q9Y4C4 1052 aa12.51□□□□□ -0.41
PTPRK-201ENST00000368202 CHD9Q3L8U1 2897 aa12.51□□□□□ -0.41
PTPRK-201ENST00000368202 DOCK6Q96HP0 2047 aa12.5□□□□□ -0.41
PTPRK-201ENST00000368202 TRIOBPQ9H2D6 2365 aa12.5□□□□□ -0.41
PTPRK-201ENST00000368202 UQCRHLA0A096LP55 91 aa12.5□□□□□ -0.41
PTPRK-201ENST00000368202 BCLAF3A2AJT9 711 aaKnown RBP12.5□□□□□ -0.41
PTPRK-201ENST00000368202 NDC80O14777 642 aa12.5□□□□□ -0.41
PTPRK-201ENST00000368202 KCNN4O15554 427 aa12.5□□□□□ -0.41
PTPRK-201ENST00000368202 MTSS1O43312 755 aa12.5□□□□□ -0.41
PTPRK-201ENST00000368202 LUC7L3O95232 432 aaKnown RBP12.5□□□□□ -0.41
PTPRK-201ENST00000368202 IFNB1P01574 187 aa12.5□□□□□ -0.41
PTPRK-201ENST00000368202 KRT14P02533 472 aa12.5□□□□□ -0.41
PTPRK-201ENST00000368202 UQCRHP07919 91 aa12.5□□□□□ -0.41
PTPRK-201ENST00000368202 OXCT1P55809 520 aa12.5□□□□□ -0.41
PTPRK-201ENST00000368202 YBEYP58557 167 aaPredicted RBP12.5□□□□□ -0.41
PTPRK-201ENST00000368202 RPS24P62847 133 aaKnown RBP12.5□□□□□ -0.41
PTPRK-201ENST00000368202 SLC7A5Q01650 507 aa12.5□□□□□ -0.41
PTPRK-201ENST00000368202 SLC10A2Q12908 348 aaPredicted RBP12.5□□□□□ -0.41
PTPRK-201ENST00000368202 POLD3Q15054 466 aaPredicted RBP12.5□□□□□ -0.41
PTPRK-201ENST00000368202 ANO4Q32M45 955 aa12.5□□□□□ -0.41
PTPRK-201ENST00000368202 FAM78AQ5JUQ0 283 aa12.5□□□□□ -0.41
PTPRK-201ENST00000368202 MTSS1LQ765P7 747 aa12.5□□□□□ -0.41
PTPRK-201ENST00000368202 SETD3Q86TU7 594 aaPredicted RBP12.5□□□□□ -0.41
PTPRK-201ENST00000368202 NLRP14Q86W24 1093 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms