RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 YY1AP1Q9H869 796 aa11.84□□□□□ -0.51
SYNE1-204ENST00000367248 ZNHIT2Q9UHR6 403 aa11.84□□□□□ -0.51
SYNE1-204ENST00000367248 AURKCQ9UQB9 309 aa11.84□□□□□ -0.51
SYNE1-204ENST00000367248 HALP42357 657 aa11.84□□□□□ -0.51
SYNE1-204ENST00000367248 SH3D19Q5HYK7 790 aa11.84□□□□□ -0.51
SYNE1-204ENST00000367248 MIER2Q8N344 545 aa11.84□□□□□ -0.51
SYNE1-204ENST00000367248 ZFP42Q96MM3 310 aa11.84□□□□□ -0.51
SYNE1-204ENST00000367248 GULP1Q9UBP9 304 aa11.84□□□□□ -0.51
SYNE1-204ENST00000367248 TBC1D3DA0A087WVF3 549 aa11.84□□□□□ -0.51
SYNE1-204ENST00000367248 TBC1D3IA0A087WXS9 549 aa11.84□□□□□ -0.51
SYNE1-204ENST00000367248 TBC1D3EA0A087X179 549 aa11.84□□□□□ -0.51
SYNE1-204ENST00000367248 TBC1D3KA0A087X1G2 549 aa11.84□□□□□ -0.51
SYNE1-204ENST00000367248 TBC1D3FA6NER0 549 aaPredicted RBP11.84□□□□□ -0.51
SYNE1-204ENST00000367248 TBC1D3LB9A6J9 549 aa11.84□□□□□ -0.51
SYNE1-204ENST00000367248 BUD23O43709 281 aaKnown RBP11.84□□□□□ -0.51
SYNE1-204ENST00000367248 DYRK3O43781 588 aa11.84□□□□□ -0.51
SYNE1-204ENST00000367248 TBC1D3HP0C7X1 549 aa11.84□□□□□ -0.51
SYNE1-204ENST00000367248 CHKAP35790 457 aa11.84□□□□□ -0.51
SYNE1-204ENST00000367248 ARL2P36404 184 aa11.84□□□□□ -0.51
SYNE1-204ENST00000367248 GP5P40197 560 aa11.84□□□□□ -0.51
SYNE1-204ENST00000367248 SLC9A5Q14940 896 aa11.84□□□□□ -0.51
SYNE1-204ENST00000367248 TBC1D3GQ6DHY5 549 aa11.84□□□□□ -0.51
SYNE1-204ENST00000367248 TBC1D3CQ6IPX1 549 aa11.84□□□□□ -0.51
SYNE1-204ENST00000367248 ZNF438Q7Z4V0 828 aa11.84□□□□□ -0.51
SYNE1-204ENST00000367248 TBC1D3Q8IZP1 549 aaPredicted RBP11.84□□□□□ -0.51
SYNE1-204ENST00000367248 SPPL2BQ8TCT7 592 aa11.84□□□□□ -0.51
SYNE1-204ENST00000367248 EXOC2Q96KP1 924 aa11.84□□□□□ -0.51
SYNE1-204ENST00000367248 IKZF4Q9H2S9 585 aa11.84□□□□□ -0.51
SYNE1-204ENST00000367248 PTPRHQ9HD43 1115 aa11.84□□□□□ -0.51
SYNE1-204ENST00000367248 MYO1GB0I1T2 1018 aa11.83□□□□□ -0.51
SYNE1-204ENST00000367248 MTA2O94776 668 aa11.83□□□□□ -0.51
SYNE1-204ENST00000367248 MMP13P45452 471 aa11.83□□□□□ -0.51
SYNE1-204ENST00000367248 CSHL1Q14406 222 aa11.83□□□□□ -0.51
SYNE1-204ENST00000367248 CYP4X1Q8N118 509 aa11.83□□□□□ -0.51
SYNE1-204ENST00000367248 SNRNP25Q9BV90 132 aaKnown RBP11.83□□□□□ -0.51
SYNE1-204ENST00000367248 FUT8Q9BYC5 575 aa11.83□□□□□ -0.51
SYNE1-204ENST00000367248 ARHGAP26Q9UNA1 814 aa11.83□□□□□ -0.51
SYNE1-204ENST00000367248 DYRK1BQ9Y463 629 aa11.83□□□□□ -0.51
SYNE1-204ENST00000367248 IRAK1P51617 712 aa11.83□□□□□ -0.52
SYNE1-204ENST00000367248 INPP5AQ14642 412 aa11.83□□□□□ -0.52
SYNE1-204ENST00000367248 GALNTL6Q49A17 601 aa11.83□□□□□ -0.52
SYNE1-204ENST00000367248 TSHZ1Q6ZSZ6 1077 aa11.83□□□□□ -0.52
SYNE1-204ENST00000367248 TTPALQ9BTX7 342 aa11.83□□□□□ -0.52
SYNE1-204ENST00000367248 FGFBP2Q9BYJ0 223 aa11.83□□□□□ -0.52
SYNE1-204ENST00000367248 TEKT2Q9UIF3 430 aa11.83□□□□□ -0.52
SYNE1-204ENST00000367248 ABCC6O95255 1503 aa11.83□□□□□ -0.52
SYNE1-204ENST00000367248 SCAMP1O15126 338 aa11.83□□□□□ -0.52
SYNE1-204ENST00000367248 GLUD2P49448 558 aa11.83□□□□□ -0.52
SYNE1-204ENST00000367248 OR6K2Q8NGY2 324 aa11.83□□□□□ -0.52
SYNE1-204ENST00000367248 TUBGCP3Q96CW5 907 aa11.83□□□□□ -0.52
SYNE1-204ENST00000367248 POLR1EQ9GZS1 481 aaKnown RBP11.83□□□□□ -0.52
SYNE1-204ENST00000367248 DNMT3LQ9UJW3 386 aa11.83□□□□□ -0.52
SYNE1-204ENST00000367248 RUVBL2Q9Y230 463 aaKnown RBP11.83□□□□□ -0.52
SYNE1-204ENST00000367248 ERI2A8K979 691 aaKnown RBP11.83□□□□□ -0.52
SYNE1-204ENST00000367248 DGKIO75912 1065 aa11.83□□□□□ -0.52
SYNE1-204ENST00000367248 LAG3P18627 525 aa11.83□□□□□ -0.52
SYNE1-204ENST00000367248 HNRNPH3P31942 346 aaKnown RBP11.83□□□□□ -0.52
SYNE1-204ENST00000367248 NME5P56597 212 aa11.83□□□□□ -0.52
SYNE1-204ENST00000367248 FPGSQ05932 587 aa11.83□□□□□ -0.52
SYNE1-204ENST00000367248 CMTM5Q96DZ9 223 aa11.83□□□□□ -0.52
SYNE1-204ENST00000367248 FAR2Q96K12 515 aa11.83□□□□□ -0.52
SYNE1-204ENST00000367248 XPNPEP1Q9NQW7 623 aa11.83□□□□□ -0.52
SYNE1-204ENST00000367248 UNCXA6NJT0 531 aa11.83□□□□□ -0.52
SYNE1-204ENST00000367248 ZNF7P17097 686 aaPredicted RBP11.83□□□□□ -0.52
SYNE1-204ENST00000367248 PGAM1P18669 254 aa11.83□□□□□ -0.52
SYNE1-204ENST00000367248 CLK2P49760 499 aaKnown RBP11.83□□□□□ -0.52
SYNE1-204ENST00000367248 IRS2Q9Y4H2 1338 aa11.83□□□□□ -0.52
SYNE1-204ENST00000367248 PIK3C2AO00443 1686 aa11.83□□□□□ -0.52
SYNE1-204ENST00000367248 VAPBO95292 243 aa11.83□□□□□ -0.52
SYNE1-204ENST00000367248 MAGEA9P43362 315 aa11.83□□□□□ -0.52
SYNE1-204ENST00000367248 CHMP1BQ7LBR1 199 aa11.83□□□□□ -0.52
SYNE1-204ENST00000367248 CAMKK1Q8N5S9 505 aa11.83□□□□□ -0.52
SYNE1-204ENST00000367248 ATAD1Q8NBU5 361 aa11.83□□□□□ -0.52
SYNE1-204ENST00000367248 ZFYVE19Q96K21 471 aa11.83□□□□□ -0.52
SYNE1-204ENST00000367248 SIGLEC1Q9BZZ2 1709 aa11.82□□□□□ -0.52
SYNE1-204ENST00000367248 B2RBV5 119 aa11.82□□□□□ -0.52
SYNE1-204ENST00000367248 AIM2O14862 343 aa11.82□□□□□ -0.52
SYNE1-204ENST00000367248 KRT16P08779 473 aa11.82□□□□□ -0.52
SYNE1-204ENST00000367248 ILF2Q12905 390 aaKnown RBP11.82□□□□□ -0.52
SYNE1-204ENST00000367248 C9orf57Q5W0N0 161 aa11.82□□□□□ -0.52
SYNE1-204ENST00000367248 MTSS1LQ765P7 747 aa11.82□□□□□ -0.52
SYNE1-204ENST00000367248 AGGF1Q8N302 714 aaeCLIP11.82□□□□□ -0.52
SYNE1-204ENST00000367248 DBF4BQ8NFT6 615 aa11.82□□□□□ -0.52
SYNE1-204ENST00000367248 TMEM159Q96B96 161 aa11.82□□□□□ -0.52
SYNE1-204ENST00000367248 NRBF2Q96F24 287 aa11.82□□□□□ -0.52
SYNE1-204ENST00000367248 CNGB3Q9NQW8 809 aa11.82□□□□□ -0.52
SYNE1-204ENST00000367248 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.82□□□□□ -0.52
SYNE1-204ENST00000367248 PARNO95453 639 aaKnown RBP11.82□□□□□ -0.52
SYNE1-204ENST00000367248 OVGP1Q12889 678 aa11.82□□□□□ -0.52
SYNE1-204ENST00000367248 TP53BP2Q13625 1128 aa11.82□□□□□ -0.52
SYNE1-204ENST00000367248 KLHL3Q9UH77 587 aa11.82□□□□□ -0.52
SYNE1-204ENST00000367248 SYCE1LA8MT33 242 aa11.82□□□□□ -0.52
SYNE1-204ENST00000367248 GOLGA8TH3BQL2 631 aa11.82□□□□□ -0.52
SYNE1-204ENST00000367248 FAM107AO95990 144 aa11.82□□□□□ -0.52
SYNE1-204ENST00000367248 MRPS5P82675 430 aaKnown RBP11.82□□□□□ -0.52
SYNE1-204ENST00000367248 EIF2B5Q13144 721 aaKnown RBP11.82□□□□□ -0.52
SYNE1-204ENST00000367248 PDCD2Q16342 344 aaPredicted RBP11.82□□□□□ -0.52
SYNE1-204ENST00000367248 ARMC12Q5T9G4 340 aa11.82□□□□□ -0.52
SYNE1-204ENST00000367248 ZNF470Q6ECI4 717 aa11.82□□□□□ -0.52
SYNE1-204ENST00000367248 ZCCHC2Q9C0B9 1178 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms