RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 HOXA4Q00056 320 aaPredicted RBP4.11□□□□□ -1.75
RNU6-28P-201ENST00000362378 B4GALNT1Q00973 533 aa4.11□□□□□ -1.75
RNU6-28P-201ENST00000362378 GOLGA8FQ08AF8 430 aa4.11□□□□□ -1.75
RNU6-28P-201ENST00000362378 PTP4A2Q12974 167 aa4.11□□□□□ -1.75
RNU6-28P-201ENST00000362378 SEMA3AQ14563 771 aa4.11□□□□□ -1.75
RNU6-28P-201ENST00000362378 KCNB1Q14721 858 aa4.11□□□□□ -1.75
RNU6-28P-201ENST00000362378 SEC23BQ15437 767 aa4.11□□□□□ -1.75
RNU6-28P-201ENST00000362378 GLE1Q53GS7 698 aaKnown RBP4.11□□□□□ -1.75
RNU6-28P-201ENST00000362378 CEP85Q6P2H3 762 aa4.11□□□□□ -1.75
RNU6-28P-201ENST00000362378 MTFR2Q6P444 385 aa4.11□□□□□ -1.75
RNU6-28P-201ENST00000362378 TRIM72Q6ZMU5 477 aa4.11□□□□□ -1.75
RNU6-28P-201ENST00000362378 Q6ZPA2 131 aa4.11□□□□□ -1.75
RNU6-28P-201ENST00000362378 DCDC5Q6ZRR9 648 aa4.11□□□□□ -1.75
RNU6-28P-201ENST00000362378 SLC29A4Q7RTT9 530 aa4.11□□□□□ -1.75
RNU6-28P-201ENST00000362378 R3HCC1LQ7Z5L2 792 aaKnown RBP4.11□□□□□ -1.75
RNU6-28P-201ENST00000362378 GALNT7Q86SF2 657 aa4.11□□□□□ -1.75
RNU6-28P-201ENST00000362378 SCN4BQ8IWT1 228 aa4.11□□□□□ -1.75
RNU6-28P-201ENST00000362378 ZNF366Q8N895 744 aa4.11□□□□□ -1.75
RNU6-28P-201ENST00000362378 NFKBIDQ8NI38 313 aa4.11□□□□□ -1.75
RNU6-28P-201ENST00000362378 REPS1Q96D71 796 aa4.11□□□□□ -1.75
RNU6-28P-201ENST00000362378 ELP4Q96EB1 424 aa4.11□□□□□ -1.75
RNU6-28P-201ENST00000362378 DAZAP1Q96EP5 407 aaKnown RBP4.11□□□□□ -1.75
RNU6-28P-201ENST00000362378 P2RY11Q96G91 374 aa4.11□□□□□ -1.75
RNU6-28P-201ENST00000362378 HS6ST2Q96MM7 605 aa4.11□□□□□ -1.75
RNU6-28P-201ENST00000362378 GPR78Q96P69 363 aa4.11□□□□□ -1.75
RNU6-28P-201ENST00000362378 TIMP4Q99727 224 aa4.11□□□□□ -1.75
RNU6-28P-201ENST00000362378 MACROD1Q9BQ69 325 aa4.11□□□□□ -1.75
RNU6-28P-201ENST00000362378 CHCHD6Q9BRQ6 235 aa4.11□□□□□ -1.75
RNU6-28P-201ENST00000362378 ZNF747Q9BV97 191 aa4.11□□□□□ -1.75
RNU6-28P-201ENST00000362378 GATA5Q9BWX5 397 aaPredicted RBP4.11□□□□□ -1.75
RNU6-28P-201ENST00000362378 CTDSP1Q9GZU7 261 aa4.11□□□□□ -1.75
RNU6-28P-201ENST00000362378 INTS2Q9H0H0 1204 aaKnown RBP4.11□□□□□ -1.75
RNU6-28P-201ENST00000362378 TMX4Q9H1E5 349 aaPredicted RBP4.11□□□□□ -1.75
RNU6-28P-201ENST00000362378 TOR3AQ9H497 397 aa4.11□□□□□ -1.75
RNU6-28P-201ENST00000362378 PLEKHA5Q9HAU0 1116 aa4.11□□□□□ -1.75
RNU6-28P-201ENST00000362378 BEX4Q9NWD9 120 aaPredicted RBP4.11□□□□□ -1.75
RNU6-28P-201ENST00000362378 ORC3Q9UBD5 711 aaPredicted RBP4.11□□□□□ -1.75
RNU6-28P-201ENST00000362378 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.1□□□□□ -1.75
RNU6-28P-201ENST00000362378 C16orf96A6NNT2 1141 aa4.1□□□□□ -1.75
RNU6-28P-201ENST00000362378 PRRG2O14669 202 aa4.1□□□□□ -1.75
RNU6-28P-201ENST00000362378 TNPO2O14787 897 aaKnown RBP4.1□□□□□ -1.75
RNU6-28P-201ENST00000362378 TSPAN4O14817 238 aa4.1□□□□□ -1.75
RNU6-28P-201ENST00000362378 DSCR3O14972 297 aa4.1□□□□□ -1.75
RNU6-28P-201ENST00000362378 EXOC3O60645 756 aa4.1□□□□□ -1.75
RNU6-28P-201ENST00000362378 ENO1P06733 434 aaKnown RBP4.1□□□□□ -1.75
RNU6-28P-201ENST00000362378 ADH4P08319 380 aa4.1□□□□□ -1.75
RNU6-28P-201ENST00000362378 CYP4B1P13584 511 aa4.1□□□□□ -1.75
RNU6-28P-201ENST00000362378 PKMP14618 531 aaKnown RBP4.1□□□□□ -1.75
RNU6-28P-201ENST00000362378 WT1P19544 449 aaPredicted RBP4.1□□□□□ -1.75
RNU6-28P-201ENST00000362378 CHMP24386 653 aa4.1□□□□□ -1.75
RNU6-28P-201ENST00000362378 HNF1BP35680 557 aa4.1□□□□□ -1.75
RNU6-28P-201ENST00000362378 GGT5P36269 586 aa4.1□□□□□ -1.75
RNU6-28P-201ENST00000362378 PAFAH1B1P43034 410 aa4.1□□□□□ -1.75
RNU6-28P-201ENST00000362378 CCR9P51686 369 aa4.1□□□□□ -1.75
RNU6-28P-201ENST00000362378 ARHGAP8P85298 464 aa4.1□□□□□ -1.75
RNU6-28P-201ENST00000362378 PDE1CQ14123 709 aaPredicted RBP4.1□□□□□ -1.75
RNU6-28P-201ENST00000362378 KRT32Q14532 448 aa4.1□□□□□ -1.75
RNU6-28P-201ENST00000362378 FAM153CQ494X1 144 aa4.1□□□□□ -1.75
RNU6-28P-201ENST00000362378 GXYLT1Q4G148 440 aa4.1□□□□□ -1.75
RNU6-28P-201ENST00000362378 ZNF766Q5HY98 468 aa4.1□□□□□ -1.75
RNU6-28P-201ENST00000362378 HECTD2Q5U5R9 776 aa4.1□□□□□ -1.75
RNU6-28P-201ENST00000362378 SPATA1Q5VX52 437 aa4.1□□□□□ -1.75
RNU6-28P-201ENST00000362378 IGFL4Q6B9Z1 124 aa4.1□□□□□ -1.75
RNU6-28P-201ENST00000362378 TMEM65Q6PI78 240 aa4.1□□□□□ -1.75
RNU6-28P-201ENST00000362378 VSTM1Q6UX27 236 aa4.1□□□□□ -1.75
RNU6-28P-201ENST00000362378 TMTC3Q6ZXV5 915 aa4.1□□□□□ -1.75
RNU6-28P-201ENST00000362378 BRINP3Q76B58 766 aa4.1□□□□□ -1.75
RNU6-28P-201ENST00000362378 RTL10Q7L3V2 364 aa4.1□□□□□ -1.75
RNU6-28P-201ENST00000362378 CHD1LQ86WJ1 897 aa4.1□□□□□ -1.75
RNU6-28P-201ENST00000362378 RASAL3Q86YV0 1011 aa4.1□□□□□ -1.75
RNU6-28P-201ENST00000362378 RFX6Q8HWS3 928 aa4.1□□□□□ -1.75
RNU6-28P-201ENST00000362378 ANKRD52Q8NB46 1076 aa4.1□□□□□ -1.75
RNU6-28P-201ENST00000362378 ZMIZ2Q8NF64 920 aa4.1□□□□□ -1.75
RNU6-28P-201ENST00000362378 RFWD2Q8NHY2 731 aa4.1□□□□□ -1.75
RNU6-28P-201ENST00000362378 NCSTNQ92542 709 aa4.1□□□□□ -1.75
RNU6-28P-201ENST00000362378 KCNJ9Q92806 393 aa4.1□□□□□ -1.75
RNU6-28P-201ENST00000362378 CCDC17Q96LX7 622 aa4.1□□□□□ -1.75
RNU6-28P-201ENST00000362378 FYTTD1Q96QD9 318 aaKnown RBP4.1□□□□□ -1.75
RNU6-28P-201ENST00000362378 CLSTN3Q9BQT9 956 aa4.1□□□□□ -1.75
RNU6-28P-201ENST00000362378 HDHD5Q9BXW7 423 aa4.1□□□□□ -1.75
RNU6-28P-201ENST00000362378 ZNF341Q9BYN7 854 aa4.1□□□□□ -1.75
RNU6-28P-201ENST00000362378 MROH8Q9H579 483 aa4.1□□□□□ -1.75
RNU6-28P-201ENST00000362378 SEMA4BQ9NPR2 832 aaPredicted RBP4.1□□□□□ -1.75
RNU6-28P-201ENST00000362378 ASNSD1Q9NWL6 643 aa4.1□□□□□ -1.75
RNU6-28P-201ENST00000362378 ALKBH4Q9NXW9 302 aa4.1□□□□□ -1.75
RNU6-28P-201ENST00000362378 HCN3Q9P1Z3 774 aa4.1□□□□□ -1.75
RNU6-28P-201ENST00000362378 TBC1D14Q9P2M4 693 aa4.1□□□□□ -1.75
RNU6-28P-201ENST00000362378 NAALADL1Q9UQQ1 740 aa4.1□□□□□ -1.75
RNU6-28P-201ENST00000362378 OSGIN2Q9Y236 505 aa4.1□□□□□ -1.75
RNU6-28P-201ENST00000362378 PKP3Q9Y446 797 aa4.1□□□□□ -1.75
RNU6-28P-201ENST00000362378 ANKRD18BA2A2Z9 1011 aa4.09□□□□□ -1.75
RNU6-28P-201ENST00000362378 TEX22C9J3V5 150 aa4.09□□□□□ -1.75
RNU6-28P-201ENST00000362378 MCIDASD6RGH6 385 aa4.09□□□□□ -1.75
RNU6-28P-201ENST00000362378 NPIPB8E9PQR5 432 aa4.09□□□□□ -1.75
RNU6-28P-201ENST00000362378 CCNT1O60563 726 aaKnown RBP4.09□□□□□ -1.75
RNU6-28P-201ENST00000362378 JTBO76095 146 aa4.09□□□□□ -1.75
RNU6-28P-201ENST00000362378 TGM2P21980 687 aa4.09□□□□□ -1.75
RNU6-28P-201ENST00000362378 EPHA8P29322 1005 aaPredicted RBP4.09□□□□□ -1.75
RNU6-28P-201ENST00000362378 MCM7P33993 719 aa4.09□□□□□ -1.75
RNU6-28P-201ENST00000362378 GJC1P36383 396 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms