RNA–Protein interactions for RNA: ENST00000361603.6

COL4A5-202, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS P3 TSL 2 BASIC

Gene COL4A5, Length 6,469 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-202ENST00000361603 ARID3BQ8IVW6 561 aaPredicted RBP11.66□□□□□ -0.54
COL4A5-202ENST00000361603 CEP19Q96LK0 163 aa11.66□□□□□ -0.54
COL4A5-202ENST00000361603 ANKZF1Q9H8Y5 726 aa11.66□□□□□ -0.54
COL4A5-202ENST00000361603 COMMD8Q9NX08 183 aa11.66□□□□□ -0.54
COL4A5-202ENST00000361603 CCDC78A2IDD5 438 aa11.66□□□□□ -0.54
COL4A5-202ENST00000361603 LIASO43766 372 aa11.66□□□□□ -0.54
COL4A5-202ENST00000361603 CILPO75339 1184 aa11.66□□□□□ -0.54
COL4A5-202ENST00000361603 LCA5LO95447 670 aa11.66□□□□□ -0.54
COL4A5-202ENST00000361603 MAPK9P45984 424 aa11.66□□□□□ -0.54
COL4A5-202ENST00000361603 EEF1DP3Q658K8 133 aa11.66□□□□□ -0.54
COL4A5-202ENST00000361603 C16orf87Q6PH81 154 aa11.66□□□□□ -0.54
COL4A5-202ENST00000361603 POP5Q969H6 163 aaKnown RBP11.66□□□□□ -0.54
COL4A5-202ENST00000361603 TMEM159Q96B96 161 aa11.66□□□□□ -0.54
COL4A5-202ENST00000361603 NLNQ9BYT8 704 aa11.66□□□□□ -0.54
COL4A5-202ENST00000361603 COPS7BQ9H9Q2 264 aaPredicted RBP11.66□□□□□ -0.54
COL4A5-202ENST00000361603 TMEM114B3SHH9 223 aa11.65□□□□□ -0.54
COL4A5-202ENST00000361603 BMP6P22004 513 aa11.65□□□□□ -0.54
COL4A5-202ENST00000361603 NKAPQ8N5F7 415 aaKnown RBP11.65□□□□□ -0.54
COL4A5-202ENST00000361603 SH3GL3Q99963 347 aa11.65□□□□□ -0.54
COL4A5-202ENST00000361603 PDZD7Q9H5P4 517 aa11.65□□□□□ -0.54
COL4A5-202ENST00000361603 NINJ2Q9NZG7 142 aa11.65□□□□□ -0.54
COL4A5-202ENST00000361603 SMIM22K7EJ46 135 aa11.65□□□□□ -0.54
COL4A5-202ENST00000361603 LGR5O75473 907 aa11.65□□□□□ -0.54
COL4A5-202ENST00000361603 PECAM1P16284 738 aaPredicted RBP11.65□□□□□ -0.54
COL4A5-202ENST00000361603 RPL21P46778 160 aaKnown RBP11.65□□□□□ -0.54
COL4A5-202ENST00000361603 STX19Q8N4C7 294 aa11.65□□□□□ -0.54
COL4A5-202ENST00000361603 FAM162AQ96A26 154 aa11.65□□□□□ -0.54
COL4A5-202ENST00000361603 CAPNS2Q96L46 248 aa11.65□□□□□ -0.54
COL4A5-202ENST00000361603 NEUROG2Q9H2A3 272 aa11.65□□□□□ -0.54
COL4A5-202ENST00000361603 NRDE2Q9H7Z3 1164 aa11.65□□□□□ -0.54
COL4A5-202ENST00000361603 C1QTNF3-AMACRE9PGA6 284 aa11.65□□□□□ -0.54
COL4A5-202ENST00000361603 TSPAN1O60635 241 aa11.65□□□□□ -0.54
COL4A5-202ENST00000361603 MBTD1Q05BQ5 628 aa11.65□□□□□ -0.54
COL4A5-202ENST00000361603 SLC25A52Q3SY17 297 aa11.65□□□□□ -0.54
COL4A5-202ENST00000361603 RFX8Q6ZV50 586 aa11.65□□□□□ -0.54
COL4A5-202ENST00000361603 TTC30BQ8N4P2 665 aa11.65□□□□□ -0.54
COL4A5-202ENST00000361603 MCOLN3Q8TDD5 553 aa11.65□□□□□ -0.54
COL4A5-202ENST00000361603 TBC1D14Q9P2M4 693 aa11.65□□□□□ -0.54
COL4A5-202ENST00000361603 ZNF214Q9UL59 606 aaPredicted RBP11.65□□□□□ -0.54
COL4A5-202ENST00000361603 SMIM28A0A1B0GU29 152 aa11.65□□□□□ -0.54
COL4A5-202ENST00000361603 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.65□□□□□ -0.54
COL4A5-202ENST00000361603 SOWAHBA6NEL2 793 aa11.65□□□□□ -0.54
COL4A5-202ENST00000361603 RASSF10A6NK89 507 aa11.65□□□□□ -0.54
COL4A5-202ENST00000361603 B2RBV5 119 aa11.65□□□□□ -0.54
COL4A5-202ENST00000361603 KATNA1O75449 491 aa11.65□□□□□ -0.54
COL4A5-202ENST00000361603 TNFSF9P41273 254 aa11.65□□□□□ -0.54
COL4A5-202ENST00000361603 PRAMEF19Q5SWL8 479 aa11.65□□□□□ -0.54
COL4A5-202ENST00000361603 LRRC8DQ7L1W4 858 aa11.65□□□□□ -0.54
COL4A5-202ENST00000361603 GLT6D1Q7Z4J2 308 aa11.65□□□□□ -0.54
COL4A5-202ENST00000361603 IRF2BP2Q7Z5L9 587 aa11.65□□□□□ -0.54
COL4A5-202ENST00000361603 FAM95CA0A1B0GW59 222 aa11.65□□□□□ -0.55
COL4A5-202ENST00000361603 TISP43B9A030 160 aa11.65□□□□□ -0.55
COL4A5-202ENST00000361603 DGKAP23743 735 aa11.65□□□□□ -0.55
COL4A5-202ENST00000361603 CLCN5P51795 746 aa11.65□□□□□ -0.55
COL4A5-202ENST00000361603 CYLC2Q14093 348 aaPredicted RBP11.65□□□□□ -0.55
COL4A5-202ENST00000361603 AFTPHQ6ULP2 937 aa11.65□□□□□ -0.55
COL4A5-202ENST00000361603 OR5B17Q8NGF7 314 aa11.65□□□□□ -0.55
COL4A5-202ENST00000361603 OR56A4Q8NGH8 313 aa11.65□□□□□ -0.55
COL4A5-202ENST00000361603 AGR3Q8TD06 166 aa11.65□□□□□ -0.55
COL4A5-202ENST00000361603 SUSD6Q92537 303 aa11.65□□□□□ -0.55
COL4A5-202ENST00000361603 VPS45Q9NRW7 570 aa11.65□□□□□ -0.55
COL4A5-202ENST00000361603 TSR3Q9UJK0 312 aaKnown RBP11.65□□□□□ -0.55
COL4A5-202ENST00000361603 C4BPAP04003 597 aaKnown RBP11.64□□□□□ -0.55
COL4A5-202ENST00000361603 SERPIND1P05546 499 aa11.64□□□□□ -0.55
COL4A5-202ENST00000361603 ENO3P13929 434 aaPredicted RBP11.64□□□□□ -0.55
COL4A5-202ENST00000361603 CALB2P22676 271 aa11.64□□□□□ -0.55
COL4A5-202ENST00000361603 RAD23BP54727 409 aa11.64□□□□□ -0.55
COL4A5-202ENST00000361603 ECM1Q16610 540 aa11.64□□□□□ -0.55
COL4A5-202ENST00000361603 HSDL1Q3SXM5 330 aa11.64□□□□□ -0.55
COL4A5-202ENST00000361603 ZBTB41Q5SVQ8 909 aa11.64□□□□□ -0.55
COL4A5-202ENST00000361603 PLEKHA7Q6IQ23 1121 aa11.64□□□□□ -0.55
COL4A5-202ENST00000361603 LRRC8BQ6P9F7 803 aa11.64□□□□□ -0.55
COL4A5-202ENST00000361603 MOB2Q70IA6 237 aa11.64□□□□□ -0.55
COL4A5-202ENST00000361603 PHC3Q8NDX5 983 aa11.64□□□□□ -0.55
COL4A5-202ENST00000361603 NLGN2Q8NFZ4 835 aa11.64□□□□□ -0.55
COL4A5-202ENST00000361603 RDH11Q8TC12 318 aa11.64□□□□□ -0.55
COL4A5-202ENST00000361603 ATL1Q8WXF7 558 aa11.64□□□□□ -0.55
COL4A5-202ENST00000361603 JADE3Q92613 823 aa11.64□□□□□ -0.55
COL4A5-202ENST00000361603 KLF6Q99612 283 aaPredicted RBP11.64□□□□□ -0.55
COL4A5-202ENST00000361603 C17orf80Q9BSJ5 609 aa11.64□□□□□ -0.55
COL4A5-202ENST00000361603 SNRNP25Q9BV90 132 aaKnown RBP11.64□□□□□ -0.55
COL4A5-202ENST00000361603 HIPK3Q9H422 1215 aa11.64□□□□□ -0.55
COL4A5-202ENST00000361603 hCG_1818297A0A087WSY0 165 aa11.64□□□□□ -0.55
COL4A5-202ENST00000361603 F8VP50 259 aa11.64□□□□□ -0.55
COL4A5-202ENST00000361603 TRIM13O60858 407 aa11.64□□□□□ -0.55
COL4A5-202ENST00000361603 CTNNB1P35222 781 aa11.64□□□□□ -0.55
COL4A5-202ENST00000361603 PHKG1Q16816 387 aa11.64□□□□□ -0.55
COL4A5-202ENST00000361603 UBE2E3Q969T4 207 aa11.64□□□□□ -0.55
COL4A5-202ENST00000361603 TUBGCP3Q96CW5 907 aa11.64□□□□□ -0.55
COL4A5-202ENST00000361603 SNX27Q96L92 541 aa11.64□□□□□ -0.55
COL4A5-202ENST00000361603 ACBD6Q9BR61 282 aa11.64□□□□□ -0.55
COL4A5-202ENST00000361603 NFKBIZQ9BYH8 718 aa11.64□□□□□ -0.55
COL4A5-202ENST00000361603 DMGDHQ9UI17 866 aaKnown RBP11.64□□□□□ -0.55
COL4A5-202ENST00000361603 RIPK3Q9Y572 518 aa11.64□□□□□ -0.55
COL4A5-202ENST00000361603 PDE2AO00408 941 aaPredicted RBP11.64□□□□□ -0.55
COL4A5-202ENST00000361603 WARSP23381 471 aaKnown RBP11.64□□□□□ -0.55
COL4A5-202ENST00000361603 RANBP1P43487 201 aa11.64□□□□□ -0.55
COL4A5-202ENST00000361603 POLD2P49005 469 aa11.64□□□□□ -0.55
COL4A5-202ENST00000361603 IRF5Q13568 498 aa11.64□□□□□ -0.55
COL4A5-202ENST00000361603 FAM46CQ5VWP2 391 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms