RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 TXNDC11Q6PKC3 985 aa14.23□□□□□ -0.13
NSMCE1-201ENST00000361439 RFX8Q6ZV50 586 aa14.23□□□□□ -0.13
NSMCE1-201ENST00000361439 NLRP14Q86W24 1093 aa14.23□□□□□ -0.13
NSMCE1-201ENST00000361439 C12orf40Q86WS4 652 aa14.23□□□□□ -0.13
NSMCE1-201ENST00000361439 FAM72BQ86X60 149 aa14.23□□□□□ -0.13
NSMCE1-201ENST00000361439 AHI1Q8N157 1196 aa14.23□□□□□ -0.13
NSMCE1-201ENST00000361439 ZNF687Q8N1G0 1237 aa14.23□□□□□ -0.13
NSMCE1-201ENST00000361439 CFAP52Q8N1V2 620 aa14.23□□□□□ -0.13
NSMCE1-201ENST00000361439 PYROXD2Q8N2H3 581 aa14.23□□□□□ -0.13
NSMCE1-201ENST00000361439 CARNMT1Q8N4J0 409 aa14.23□□□□□ -0.13
NSMCE1-201ENST00000361439 LZTR1Q8N653 840 aa14.23□□□□□ -0.13
NSMCE1-201ENST00000361439 NAT16Q8N8M0 369 aa14.23□□□□□ -0.13
NSMCE1-201ENST00000361439 TERB1Q8NA31 727 aa14.23□□□□□ -0.13
NSMCE1-201ENST00000361439 KCTD6Q8NC69 237 aa14.23□□□□□ -0.13
NSMCE1-201ENST00000361439 HSPH1Q92598 858 aa14.23□□□□□ -0.13
NSMCE1-201ENST00000361439 BHMTQ93088 406 aa14.23□□□□□ -0.13
NSMCE1-201ENST00000361439 MYEOVQ96EZ4 313 aa14.23□□□□□ -0.13
NSMCE1-201ENST00000361439 P2RY11Q96G91 374 aa14.23□□□□□ -0.13
NSMCE1-201ENST00000361439 KCTD15Q96SI1 283 aaPredicted RBP14.23□□□□□ -0.13
NSMCE1-201ENST00000361439 ZNF670Q9BS34 389 aa14.23□□□□□ -0.13
NSMCE1-201ENST00000361439 IER2Q9BTL4 223 aa14.23□□□□□ -0.13
NSMCE1-201ENST00000361439 MFSD1Q9H3U5 465 aa14.23□□□□□ -0.13
NSMCE1-201ENST00000361439 TBC1D17Q9HA65 648 aa14.23□□□□□ -0.13
NSMCE1-201ENST00000361439 ARHGEF4Q9NR80 690 aa14.23□□□□□ -0.13
NSMCE1-201ENST00000361439 KCND1Q9NSA2 647 aa14.23□□□□□ -0.13
NSMCE1-201ENST00000361439 ZNF212Q9UDV6 495 aa14.23□□□□□ -0.13
NSMCE1-201ENST00000361439 TRIM10Q9UDY6 481 aa14.23□□□□□ -0.13
NSMCE1-201ENST00000361439 AMFRQ9UKV5 643 aa14.23□□□□□ -0.13
NSMCE1-201ENST00000361439 STARD13Q9Y3M8 1113 aa14.23□□□□□ -0.13
NSMCE1-201ENST00000361439 TRIOO75962 3097 aa14.23□□□□□ -0.13
NSMCE1-201ENST00000361439 ILVBLA1L0T0 632 aa14.22□□□□□ -0.13
NSMCE1-201ENST00000361439 TBC1D3BA6NDS4 549 aa14.22□□□□□ -0.13
NSMCE1-201ENST00000361439 TMEM221A6NGB7 291 aa14.22□□□□□ -0.13
NSMCE1-201ENST00000361439 M0R296 226 aa14.22□□□□□ -0.13
NSMCE1-201ENST00000361439 CTNNA2P26232 953 aa14.22□□□□□ -0.13
NSMCE1-201ENST00000361439 HLA-FP30511 346 aa14.22□□□□□ -0.13
NSMCE1-201ENST00000361439 OR1E1P30953 314 aa14.22□□□□□ -0.13
NSMCE1-201ENST00000361439 CTNNA1P35221 906 aaKnown RBP14.22□□□□□ -0.13
NSMCE1-201ENST00000361439 RPS9P46781 194 aaKnown RBP14.22□□□□□ -0.13
NSMCE1-201ENST00000361439 SLC6A11P48066 632 aa14.22□□□□□ -0.13
NSMCE1-201ENST00000361439 CLCN5P51795 746 aa14.22□□□□□ -0.13
NSMCE1-201ENST00000361439 PLK1P53350 603 aa14.22□□□□□ -0.13
NSMCE1-201ENST00000361439 CDH6P55285 790 aa14.22□□□□□ -0.13
NSMCE1-201ENST00000361439 SULT2A1Q06520 285 aa14.22□□□□□ -0.13
NSMCE1-201ENST00000361439 KRT81Q14533 505 aa14.22□□□□□ -0.13
NSMCE1-201ENST00000361439 PON2Q15165 354 aa14.22□□□□□ -0.13
NSMCE1-201ENST00000361439 CA9Q16790 459 aa14.22□□□□□ -0.13
NSMCE1-201ENST00000361439 HSF5Q4G112 596 aaPredicted RBP14.22□□□□□ -0.13
NSMCE1-201ENST00000361439 ALFQ53S48 1182 aa14.22□□□□□ -0.13
NSMCE1-201ENST00000361439 PPP6R3Q5H9R7 873 aaPredicted RBP14.22□□□□□ -0.13
NSMCE1-201ENST00000361439 TXNRD3NBQ6F5E7 133 aa14.22□□□□□ -0.13
NSMCE1-201ENST00000361439 PEX26Q7Z412 305 aa14.22□□□□□ -0.13
NSMCE1-201ENST00000361439 NT5DC3Q86UY8 548 aa14.22□□□□□ -0.13
NSMCE1-201ENST00000361439 KATNAL2Q8IYT4 538 aa14.22□□□□□ -0.13
NSMCE1-201ENST00000361439 RTL3Q8N8U3 475 aaKnown RBP14.22□□□□□ -0.13
NSMCE1-201ENST00000361439 TSC1Q92574 1164 aa14.22□□□□□ -0.13
NSMCE1-201ENST00000361439 LMLNQ96KR4 655 aa14.22□□□□□ -0.13
NSMCE1-201ENST00000361439 PCDH18Q9HCL0 1135 aa14.22□□□□□ -0.13
NSMCE1-201ENST00000361439 LZTFL1Q9NQ48 299 aa14.22□□□□□ -0.13
NSMCE1-201ENST00000361439 MPP6Q9NZW5 540 aa14.22□□□□□ -0.13
NSMCE1-201ENST00000361439 CWC15Q9P013 229 aaKnown RBP14.22□□□□□ -0.13
NSMCE1-201ENST00000361439 GGA2Q9UJY4 613 aa14.22□□□□□ -0.13
NSMCE1-201ENST00000361439 CLEC4EQ9ULY5 219 aa14.22□□□□□ -0.13
NSMCE1-201ENST00000361439 PCDHA3Q9Y5H8 950 aa14.22□□□□□ -0.13
NSMCE1-201ENST00000361439 SNX10Q9Y5X0 201 aa14.22□□□□□ -0.13
NSMCE1-201ENST00000361439 COL4A3Q01955 1670 aa14.21□□□□□ -0.13
NSMCE1-201ENST00000361439 A0A0U1RQJ8 604 aa14.21□□□□□ -0.13
NSMCE1-201ENST00000361439 DAPK3O43293 454 aa14.21□□□□□ -0.13
NSMCE1-201ENST00000361439 CNTN5O94779 1100 aa14.21□□□□□ -0.13
NSMCE1-201ENST00000361439 PABPC1P11940 636 aaKnown RBP14.21□□□□□ -0.13
NSMCE1-201ENST00000361439 KDELR1P24390 212 aa14.21□□□□□ -0.13
NSMCE1-201ENST00000361439 MSNP26038 577 aaKnown RBP14.21□□□□□ -0.13
NSMCE1-201ENST00000361439 GGCXP38435 758 aa14.21□□□□□ -0.13
NSMCE1-201ENST00000361439 VASPP50552 380 aaPredicted RBP14.21□□□□□ -0.13
NSMCE1-201ENST00000361439 YBEYP58557 167 aaPredicted RBP14.21□□□□□ -0.13
NSMCE1-201ENST00000361439 COPS2P61201 443 aa14.21□□□□□ -0.13
NSMCE1-201ENST00000361439 DPYSQ14117 519 aa14.21□□□□□ -0.13
NSMCE1-201ENST00000361439 ODF2Q5BJF6 829 aa14.21□□□□□ -0.13
NSMCE1-201ENST00000361439 FSTL4Q6MZW2 842 aa14.21□□□□□ -0.13
NSMCE1-201ENST00000361439 CXorf57Q6NSI4 855 aaKnown RBP14.21□□□□□ -0.13
NSMCE1-201ENST00000361439 REXO1L1PQ8IX06 675 aa14.21□□□□□ -0.13
NSMCE1-201ENST00000361439 RCOR2Q8IZ40 523 aa14.21□□□□□ -0.13
NSMCE1-201ENST00000361439 UMODL1-AS1Q8N2C9 162 aa14.21□□□□□ -0.13
NSMCE1-201ENST00000361439 UBL4BQ8N7F7 174 aa14.21□□□□□ -0.13
NSMCE1-201ENST00000361439 KDM1BQ8NB78 822 aa14.21□□□□□ -0.13
NSMCE1-201ENST00000361439 PJA1Q8NG27 643 aa14.21□□□□□ -0.13
NSMCE1-201ENST00000361439 EXD1Q8NHP7 514 aa14.21□□□□□ -0.13
NSMCE1-201ENST00000361439 UCMAQ8WVF2 138 aa14.21□□□□□ -0.13
NSMCE1-201ENST00000361439 ATRIPQ8WXE1 791 aa14.21□□□□□ -0.13
NSMCE1-201ENST00000361439 CLDN23Q96B33 292 aa14.21□□□□□ -0.13
NSMCE1-201ENST00000361439 FAF2Q96CS3 445 aa14.21□□□□□ -0.13
NSMCE1-201ENST00000361439 CSPG4P5Q96PW8 444 aa14.21□□□□□ -0.13
NSMCE1-201ENST00000361439 MAGEH1Q9H213 219 aa14.21□□□□□ -0.13
NSMCE1-201ENST00000361439 ABCB8Q9NUT2 735 aa14.21□□□□□ -0.13
NSMCE1-201ENST00000361439 GPATCH2LQ9NWQ4 482 aa14.21□□□□□ -0.13
NSMCE1-201ENST00000361439 SIT1Q9Y3P8 196 aa14.21□□□□□ -0.13
NSMCE1-201ENST00000361439 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.21□□□□□ -0.13
NSMCE1-201ENST00000361439 CUL9Q8IWT3 2517 aa14.21□□□□□ -0.13
NSMCE1-201ENST00000361439 FAM170BA6NMN3 283 aa14.2□□□□□ -0.14
NSMCE1-201ENST00000361439 ZRANB2O95218 330 aaKnown RBP eCLIP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms