RNA–Protein interactions for RNA: ENST00000361339.9

IFT140-201, Transcript of intraflagellar transport 140, humanhuman

TSL 1 (best) BASIC

Gene IFT140, Length 2,987 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-201ENST00000361339 PLXNB2O15031 1838 aa16.6■□□□□ 0.25
IFT140-201ENST00000361339 ZSWIM8A7E2V4 1837 aa16.6■□□□□ 0.25
IFT140-201ENST00000361339 A0A0J9YVX5 310 aa16.6■□□□□ 0.25
IFT140-201ENST00000361339 RBM47A0AV96 593 aaKnown RBP16.6■□□□□ 0.25
IFT140-201ENST00000361339 RAP1GDS1P52306 607 aa16.6■□□□□ 0.25
IFT140-201ENST00000361339 ADIGQ0VDE8 80 aa16.6■□□□□ 0.25
IFT140-201ENST00000361339 PDK2Q15119 407 aa16.6■□□□□ 0.25
IFT140-201ENST00000361339 ACAD11Q709F0 780 aa16.6■□□□□ 0.25
IFT140-201ENST00000361339 DEFB106AQ8N104 65 aa16.6■□□□□ 0.25
IFT140-201ENST00000361339 HSPBAP1Q96EW2 488 aa16.6■□□□□ 0.25
IFT140-201ENST00000361339 TINF2Q9BSI4 451 aa16.6■□□□□ 0.25
IFT140-201ENST00000361339 LIN28AQ9H9Z2 209 aaKnown RBP16.6■□□□□ 0.25
IFT140-201ENST00000361339 S100A14Q9HCY8 104 aa16.6■□□□□ 0.25
IFT140-201ENST00000361339 FLRT1Q9NZU1 646 aa16.6■□□□□ 0.25
IFT140-201ENST00000361339 SEPT10Q9P0V9 454 aa16.6■□□□□ 0.25
IFT140-201ENST00000361339 TAGLN3Q9UI15 199 aa16.6■□□□□ 0.25
IFT140-201ENST00000361339 TIMM13Q9Y5L4 95 aaPredicted RBP16.6■□□□□ 0.25
IFT140-201ENST00000361339 COPEO14579 308 aa16.59■□□□□ 0.25
IFT140-201ENST00000361339 MFSD11O43934 449 aa16.59■□□□□ 0.25
IFT140-201ENST00000361339 DNAJC6O75061 913 aa16.59■□□□□ 0.25
IFT140-201ENST00000361339 UQCRBP14927 111 aa16.59■□□□□ 0.25
IFT140-201ENST00000361339 ADARP55265 1226 aaKnown RBP16.59■□□□□ 0.25
IFT140-201ENST00000361339 KRT72Q14CN4 511 aa16.59■□□□□ 0.25
IFT140-201ENST00000361339 DGKDQ16760 1214 aa16.59■□□□□ 0.25
IFT140-201ENST00000361339 FBXO47Q5MNV8 452 aa16.59■□□□□ 0.25
IFT140-201ENST00000361339 OTUD1Q5VV17 481 aaPredicted RBP16.59■□□□□ 0.25
IFT140-201ENST00000361339 SYPL2Q5VXT5 272 aa16.59■□□□□ 0.25
IFT140-201ENST00000361339 SIGLEC10Q96LC7 697 aa16.59■□□□□ 0.25
IFT140-201ENST00000361339 C11orf84Q9BUA3 381 aaPredicted RBP16.59■□□□□ 0.25
IFT140-201ENST00000361339 ARHGEF38Q9NXL2 777 aa16.59■□□□□ 0.25
IFT140-201ENST00000361339 BLOC1S6Q9UL45 172 aa16.59■□□□□ 0.25
IFT140-201ENST00000361339 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.59■□□□□ 0.25
IFT140-201ENST00000361339 C15orf38-AP3S2A0A0A6YYH1 394 aa16.59■□□□□ 0.25
IFT140-201ENST00000361339 IQANK1A0A1B0GTG1 560 aa16.59■□□□□ 0.25
IFT140-201ENST00000361339 WDR27A2RRH5 827 aa16.59■□□□□ 0.25
IFT140-201ENST00000361339 KPNA7A9QM74 516 aa16.59■□□□□ 0.25
IFT140-201ENST00000361339 RFPL1O75677 317 aa16.59■□□□□ 0.25
IFT140-201ENST00000361339 PROCP04070 461 aa16.59■□□□□ 0.25
IFT140-201ENST00000361339 SETSIPP0DME0 302 aa16.59■□□□□ 0.25
IFT140-201ENST00000361339 RAG1P15918 1043 aa16.59■□□□□ 0.25
IFT140-201ENST00000361339 FOLH1Q04609 750 aa16.59■□□□□ 0.25
IFT140-201ENST00000361339 KIAA0319Q5VV43 1072 aa16.59■□□□□ 0.25
IFT140-201ENST00000361339 DUS1LQ6P1R4 473 aaKnown RBP16.59■□□□□ 0.25
IFT140-201ENST00000361339 ARPINQ7Z6K5 226 aa16.59■□□□□ 0.25
IFT140-201ENST00000361339 PIGZQ86VD9 579 aa16.59■□□□□ 0.25
IFT140-201ENST00000361339 BEST2Q8NFU1 509 aa16.59■□□□□ 0.25
IFT140-201ENST00000361339 GCOM2Q9BZD3 368 aaPredicted RBP16.59■□□□□ 0.25
IFT140-201ENST00000361339 KLC2Q9H0B6 622 aa16.59■□□□□ 0.25
IFT140-201ENST00000361339 ANLNQ9NQW6 1124 aa16.59■□□□□ 0.25
IFT140-201ENST00000361339 BCLAF3A2AJT9 711 aaKnown RBP16.59■□□□□ 0.25
IFT140-201ENST00000361339 MAGEC1O60732 1142 aa16.59■□□□□ 0.25
IFT140-201ENST00000361339 DHRS4L1P0CG22 281 aa16.59■□□□□ 0.25
IFT140-201ENST00000361339 TGM2P21980 687 aa16.59■□□□□ 0.25
IFT140-201ENST00000361339 PCSK6P29122 969 aa16.59■□□□□ 0.25
IFT140-201ENST00000361339 SESN2P58004 480 aaPredicted RBP16.59■□□□□ 0.25
IFT140-201ENST00000361339 NME3Q13232 169 aa16.59■□□□□ 0.25
IFT140-201ENST00000361339 CCL14Q16627 93 aa16.59■□□□□ 0.25
IFT140-201ENST00000361339 DCAF6Q58WW2 860 aa16.59■□□□□ 0.25
IFT140-201ENST00000361339 C16orf46Q6P387 395 aa16.59■□□□□ 0.25
IFT140-201ENST00000361339 KLHDC10Q6PID8 442 aa16.59■□□□□ 0.25
IFT140-201ENST00000361339 ALKAL1Q6UXT8 129 aa16.59■□□□□ 0.25
IFT140-201ENST00000361339 SLC26A11Q86WA9 606 aa16.59■□□□□ 0.25
IFT140-201ENST00000361339 HPS6Q86YV9 775 aa16.59■□□□□ 0.25
IFT140-201ENST00000361339 TRIM42Q8IWZ5 723 aa16.59■□□□□ 0.25
IFT140-201ENST00000361339 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.59■□□□□ 0.25
IFT140-201ENST00000361339 PPP1R14CQ8TAE6 165 aa16.59■□□□□ 0.25
IFT140-201ENST00000361339 TM9SF1O15321 606 aa16.58■□□□□ 0.24
IFT140-201ENST00000361339 TMCC1O94876 653 aa16.58■□□□□ 0.24
IFT140-201ENST00000361339 STAU1O95793 577 aaKnown RBP16.58■□□□□ 0.24
IFT140-201ENST00000361339 CLPTM1O96005 669 aa16.58■□□□□ 0.24
IFT140-201ENST00000361339 DARSP14868 501 aaKnown RBP16.58■□□□□ 0.24
IFT140-201ENST00000361339 NELFEP18615 380 aaKnown RBP16.58■□□□□ 0.24
IFT140-201ENST00000361339 CCNA1P78396 465 aa16.58■□□□□ 0.24
IFT140-201ENST00000361339 HPCAP84074 193 aa16.58■□□□□ 0.24
IFT140-201ENST00000361339 SLC18A2Q05940 514 aa16.58■□□□□ 0.24
IFT140-201ENST00000361339 NADK2Q4G0N4 442 aa16.58■□□□□ 0.24
IFT140-201ENST00000361339 CASC4Q6P4E1 433 aa16.58■□□□□ 0.24
IFT140-201ENST00000361339 RBM12BQ8IXT5 1001 aaKnown RBP16.58■□□□□ 0.24
IFT140-201ENST00000361339 DEPDC1BQ8WUY9 529 aa16.58■□□□□ 0.24
IFT140-201ENST00000361339 EMID1Q96A84 441 aaPredicted RBP16.58■□□□□ 0.24
IFT140-201ENST00000361339 RTP4Q96DX8 246 aa16.58■□□□□ 0.24
IFT140-201ENST00000361339 ZNF670Q9BS34 389 aa16.58■□□□□ 0.24
IFT140-201ENST00000361339 CNTN3Q9P232 1028 aa16.58■□□□□ 0.24
IFT140-201ENST00000361339 FETUBQ9UGM5 382 aa16.58■□□□□ 0.24
IFT140-201ENST00000361339 CPA4Q9UI42 421 aa16.58■□□□□ 0.24
IFT140-201ENST00000361339 KIAA1257Q9ULG3 409 aa16.58■□□□□ 0.24
IFT140-201ENST00000361339 PLA2G4CQ9UP65 541 aa16.58■□□□□ 0.24
IFT140-201ENST00000361339 F8W8V4 182 aa16.58■□□□□ 0.24
IFT140-201ENST00000361339 FAM72CH0Y354 149 aa16.58■□□□□ 0.24
IFT140-201ENST00000361339 I6L893 689 aaPredicted RBP16.58■□□□□ 0.24
IFT140-201ENST00000361339 MDM4O15151 490 aa16.58■□□□□ 0.24
IFT140-201ENST00000361339 COQ9O75208 318 aa16.58■□□□□ 0.24
IFT140-201ENST00000361339 USP12O75317 370 aa16.58■□□□□ 0.24
IFT140-201ENST00000361339 LYPLA1O75608 230 aaPredicted RBP16.58■□□□□ 0.24
IFT140-201ENST00000361339 PMLP29590 882 aa16.58■□□□□ 0.24
IFT140-201ENST00000361339 BST2Q10589 180 aaKnown RBP16.58■□□□□ 0.24
IFT140-201ENST00000361339 DPYSL2Q16555 572 aa16.58■□□□□ 0.24
IFT140-201ENST00000361339 EFHC1Q5JVL4 640 aa16.58■□□□□ 0.24
IFT140-201ENST00000361339 FAM72AQ5TYM5 149 aa16.58■□□□□ 0.24
IFT140-201ENST00000361339 FAM72DQ6L9T8 149 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms