RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 GJB1P08034 283 aa7.59□□□□□ -1.19
CLCN3-202ENST00000360642 KRT3P12035 628 aa7.59□□□□□ -1.19
CLCN3-202ENST00000360642 SLC26A2P50443 739 aa7.59□□□□□ -1.19
CLCN3-202ENST00000360642 ZFYVE27Q5T4F4 411 aa7.59□□□□□ -1.19
CLCN3-202ENST00000360642 CYP4F22Q6NT55 531 aa7.59□□□□□ -1.19
CLCN3-202ENST00000360642 PPP1R21Q6ZMI0 780 aa7.59□□□□□ -1.19
CLCN3-202ENST00000360642 SCARA5Q6ZMJ2 495 aa7.59□□□□□ -1.19
CLCN3-202ENST00000360642 XYLT1Q86Y38 959 aa7.59□□□□□ -1.19
CLCN3-202ENST00000360642 JOSD2Q8TAC2 188 aa7.59□□□□□ -1.19
CLCN3-202ENST00000360642 VWCEQ96DN2 955 aa7.59□□□□□ -1.19
CLCN3-202ENST00000360642 ZNF668Q96K58 619 aaPredicted RBP7.59□□□□□ -1.19
CLCN3-202ENST00000360642 TMPRSS13Q9BYE2 586 aa7.59□□□□□ -1.19
CLCN3-202ENST00000360642 SDCBP2Q9H190 292 aa7.59□□□□□ -1.19
CLCN3-202ENST00000360642 CDT1Q9H211 546 aa7.59□□□□□ -1.19
CLCN3-202ENST00000360642 IPPKQ9H8X2 491 aa7.59□□□□□ -1.19
CLCN3-202ENST00000360642 EXOC1LA0A1B0GW35 172 aa7.59□□□□□ -1.19
CLCN3-202ENST00000360642 FAM47DPA6NHR8 397 aa7.59□□□□□ -1.19
CLCN3-202ENST00000360642 RASA4BC9J798 803 aa7.59□□□□□ -1.19
CLCN3-202ENST00000360642 PRPF4O43172 522 aaKnown RBP eCLIP7.59□□□□□ -1.19
CLCN3-202ENST00000360642 RASA4O43374 803 aa7.59□□□□□ -1.19
CLCN3-202ENST00000360642 MED7O43513 233 aa7.59□□□□□ -1.19
CLCN3-202ENST00000360642 IL18RAPO95256 599 aa7.59□□□□□ -1.19
CLCN3-202ENST00000360642 IL33O95760 270 aa7.59□□□□□ -1.19
CLCN3-202ENST00000360642 SLC25A27O95847 323 aa7.59□□□□□ -1.19
CLCN3-202ENST00000360642 KRT7P08729 469 aa7.59□□□□□ -1.19
CLCN3-202ENST00000360642 POU3F2P20265 443 aaPredicted RBP7.59□□□□□ -1.19
CLCN3-202ENST00000360642 TAC1P20366 129 aa7.59□□□□□ -1.19
CLCN3-202ENST00000360642 KDELR1P24390 212 aa7.59□□□□□ -1.19
CLCN3-202ENST00000360642 PSMA2P25787 234 aa7.59□□□□□ -1.19
CLCN3-202ENST00000360642 FOXN2P32314 431 aa7.59□□□□□ -1.19
CLCN3-202ENST00000360642 RAP1GAPP47736 663 aa7.59□□□□□ -1.19
CLCN3-202ENST00000360642 GABRB2P47870 512 aa7.59□□□□□ -1.19
CLCN3-202ENST00000360642 LACTBP83111 547 aaPredicted RBP7.59□□□□□ -1.19
CLCN3-202ENST00000360642 TFDP1Q14186 410 aa7.59□□□□□ -1.19
CLCN3-202ENST00000360642 MAP7Q14244 749 aa7.59□□□□□ -1.19
CLCN3-202ENST00000360642 GFOD2Q3B7J2 385 aa7.59□□□□□ -1.19
CLCN3-202ENST00000360642 BBS12Q6ZW61 710 aa7.59□□□□□ -1.19
CLCN3-202ENST00000360642 FAM228AQ86W67 206 aa7.59□□□□□ -1.19
CLCN3-202ENST00000360642 CPA6Q8N4T0 437 aa7.59□□□□□ -1.19
CLCN3-202ENST00000360642 GDAP1Q8TB36 358 aa7.59□□□□□ -1.19
CLCN3-202ENST00000360642 MAGEC3Q8TD91 643 aa7.59□□□□□ -1.19
CLCN3-202ENST00000360642 TRAPPC12Q8WVT3 735 aa7.59□□□□□ -1.19
CLCN3-202ENST00000360642 TGS1Q96RS0 853 aaKnown RBP7.59□□□□□ -1.19
CLCN3-202ENST00000360642 CPXM1Q96SM3 734 aa7.59□□□□□ -1.19
CLCN3-202ENST00000360642 ASCC2Q9H1I8 757 aaPredicted RBP7.59□□□□□ -1.19
CLCN3-202ENST00000360642 SEMA6CQ9H3T2 930 aa7.59□□□□□ -1.19
CLCN3-202ENST00000360642 IFT122Q9HBG6 1241 aa7.59□□□□□ -1.19
CLCN3-202ENST00000360642 TXNRD2Q9NNW7 524 aa7.59□□□□□ -1.19
CLCN3-202ENST00000360642 CEP350Q5VT06 3117 aa7.59□□□□□ -1.19
CLCN3-202ENST00000360642 HBP1O60381 514 aa7.59□□□□□ -1.19
CLCN3-202ENST00000360642 SUN1O94901 812 aa7.59□□□□□ -1.19
CLCN3-202ENST00000360642 ERBB2P04626 1255 aa7.59□□□□□ -1.19
CLCN3-202ENST00000360642 CLEC2LP0C7M8 214 aa7.59□□□□□ -1.19
CLCN3-202ENST00000360642 CXCL8P10145 99 aa7.59□□□□□ -1.19
CLCN3-202ENST00000360642 NID1P14543 1247 aa7.59□□□□□ -1.19
CLCN3-202ENST00000360642 STX2P32856 288 aa7.59□□□□□ -1.19
CLCN3-202ENST00000360642 OSTNP61366 133 aa7.59□□□□□ -1.19
CLCN3-202ENST00000360642 POU5F1BQ06416 359 aa7.59□□□□□ -1.19
CLCN3-202ENST00000360642 ZNF268Q14587 947 aaPredicted RBP7.59□□□□□ -1.19
CLCN3-202ENST00000360642 TMED2Q15363 201 aa7.59□□□□□ -1.19
CLCN3-202ENST00000360642 FAM187BQ17R55 369 aa7.59□□□□□ -1.19
CLCN3-202ENST00000360642 TMEM177Q53S58 311 aa7.59□□□□□ -1.19
CLCN3-202ENST00000360642 EFCAB12Q6NXP0 572 aa7.59□□□□□ -1.19
CLCN3-202ENST00000360642 ERAP2Q6P179 960 aa7.59□□□□□ -1.19
CLCN3-202ENST00000360642 SLCO4C1Q6ZQN7 724 aa7.59□□□□□ -1.19
CLCN3-202ENST00000360642 GADL1Q6ZQY3 521 aa7.59□□□□□ -1.19
CLCN3-202ENST00000360642 UBE2R2Q712K3 238 aaPredicted RBP7.59□□□□□ -1.19
CLCN3-202ENST00000360642 SPATA21Q7Z572 469 aa7.59□□□□□ -1.19
CLCN3-202ENST00000360642 PCGF5Q86SE9 256 aa7.59□□□□□ -1.19
CLCN3-202ENST00000360642 NAT8LQ8N9F0 302 aa7.59□□□□□ -1.19
CLCN3-202ENST00000360642 SLC4A11Q8NBS3 891 aa7.59□□□□□ -1.19
CLCN3-202ENST00000360642 CMASQ8NFW8 434 aaPredicted RBP7.59□□□□□ -1.19
CLCN3-202ENST00000360642 SVIPQ8NHG7 77 aa7.59□□□□□ -1.19
CLCN3-202ENST00000360642 HAUS1Q96CS2 278 aa7.59□□□□□ -1.19
CLCN3-202ENST00000360642 SPATA33Q96N06 139 aa7.59□□□□□ -1.19
CLCN3-202ENST00000360642 SMARCAD1Q9H4L7 1026 aa7.59□□□□□ -1.19
CLCN3-202ENST00000360642 NKIRAS1Q9NYS0 192 aa7.59□□□□□ -1.19
CLCN3-202ENST00000360642 WDR35Q9P2L0 1181 aa7.59□□□□□ -1.19
CLCN3-202ENST00000360642 SAE1Q9UBE0 346 aaPredicted RBP7.59□□□□□ -1.19
CLCN3-202ENST00000360642 RBPJLQ9UBG7 517 aa7.59□□□□□ -1.19
CLCN3-202ENST00000360642 NXF1Q9UBU9 619 aaKnown RBP7.59□□□□□ -1.19
CLCN3-202ENST00000360642 FETUBQ9UGM5 382 aa7.59□□□□□ -1.19
CLCN3-202ENST00000360642 ZMYND8Q9ULU4 1186 aaPredicted RBP7.59□□□□□ -1.19
CLCN3-202ENST00000360642 AGAP1Q9UPQ3 857 aa7.59□□□□□ -1.19
CLCN3-202ENST00000360642 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.59□□□□□ -1.19
CLCN3-202ENST00000360642 INO80B-WBP1J3KQ70 363 aa7.58□□□□□ -1.2
CLCN3-202ENST00000360642 SGK1O00141 431 aa7.58□□□□□ -1.2
CLCN3-202ENST00000360642 CBX4O00257 560 aa7.58□□□□□ -1.2
CLCN3-202ENST00000360642 CHUKO15111 745 aa7.58□□□□□ -1.2
CLCN3-202ENST00000360642 MNAT1P51948 309 aa7.58□□□□□ -1.2
CLCN3-202ENST00000360642 CDH8P55286 799 aa7.58□□□□□ -1.2
CLCN3-202ENST00000360642 GPX6P59796 221 aa7.58□□□□□ -1.2
CLCN3-202ENST00000360642 PSMC1P62191 440 aaKnown RBP7.58□□□□□ -1.2
CLCN3-202ENST00000360642 IRX3P78415 501 aaPredicted RBP7.58□□□□□ -1.2
CLCN3-202ENST00000360642 ELF3P78545 371 aaPredicted RBP7.58□□□□□ -1.2
CLCN3-202ENST00000360642 OTUD4Q01804 1114 aaKnown RBP7.58□□□□□ -1.2
CLCN3-202ENST00000360642 BNIP1Q12981 228 aa7.58□□□□□ -1.2
CLCN3-202ENST00000360642 ACVR2BQ13705 512 aa7.58□□□□□ -1.2
CLCN3-202ENST00000360642 ZNF667Q5HYK9 610 aa7.58□□□□□ -1.2
CLCN3-202ENST00000360642 RGS9BPQ6ZS82 235 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms