RNA–Protein interactions for RNA: ENST00000359429.10

RPE-202, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPE, Length 2,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-202ENST00000359429 ACVR1CQ8NER5 493 aa11.15□□□□□ -0.62
RPE-202ENST00000359429 PIP4K2CQ8TBX8 421 aa11.15□□□□□ -0.62
RPE-202ENST00000359429 HTR3CQ8WXA8 447 aa11.15□□□□□ -0.62
RPE-202ENST00000359429 CDKL2Q92772 493 aa11.15□□□□□ -0.62
RPE-202ENST00000359429 HPDLQ96IR7 371 aa11.15□□□□□ -0.62
RPE-202ENST00000359429 CSPG4P5Q96PW8 444 aa11.15□□□□□ -0.62
RPE-202ENST00000359429 KCTD15Q96SI1 283 aaPredicted RBP11.15□□□□□ -0.62
RPE-202ENST00000359429 GCOM2Q9BZD3 368 aaPredicted RBP11.15□□□□□ -0.62
RPE-202ENST00000359429 BARX2Q9UMQ3 279 aaPredicted RBP11.15□□□□□ -0.62
RPE-202ENST00000359429 NME7Q9Y5B8 376 aa11.15□□□□□ -0.62
RPE-202ENST00000359429 COL11A1P12107 1806 aaPredicted RBP11.15□□□□□ -0.62
RPE-202ENST00000359429 STAG3L1P0CL83 205 aa11.15□□□□□ -0.63
RPE-202ENST00000359429 GOT1P17174 413 aa11.15□□□□□ -0.63
RPE-202ENST00000359429 ACAT1P24752 427 aaKnown RBP11.15□□□□□ -0.63
RPE-202ENST00000359429 PRDX6P30041 224 aa11.15□□□□□ -0.63
RPE-202ENST00000359429 NUMBP49757 651 aa11.15□□□□□ -0.63
RPE-202ENST00000359429 SLC6A3Q01959 620 aa11.15□□□□□ -0.63
RPE-202ENST00000359429 CEACAM7Q14002 265 aa11.15□□□□□ -0.63
RPE-202ENST00000359429 ADGRE1Q14246 886 aa11.15□□□□□ -0.63
RPE-202ENST00000359429 DPYSL2Q16555 572 aa11.15□□□□□ -0.63
RPE-202ENST00000359429 INSCQ1MX18 579 aa11.15□□□□□ -0.63
RPE-202ENST00000359429 LRRC8BQ6P9F7 803 aa11.15□□□□□ -0.63
RPE-202ENST00000359429 GALNT4Q8N4A0 578 aa11.15□□□□□ -0.63
RPE-202ENST00000359429 ZNF280CQ8ND82 737 aa11.15□□□□□ -0.63
RPE-202ENST00000359429 AGBL3Q8NEM8 1001 aa11.15□□□□□ -0.63
RPE-202ENST00000359429 KBTBD7Q8WVZ9 684 aa11.15□□□□□ -0.63
RPE-202ENST00000359429 PPP1R16BQ96T49 567 aa11.15□□□□□ -0.63
RPE-202ENST00000359429 TBCBQ99426 244 aa11.15□□□□□ -0.63
RPE-202ENST00000359429 PKP2Q99959 881 aa11.15□□□□□ -0.63
RPE-202ENST00000359429 FAM49BQ9NUQ9 324 aa11.15□□□□□ -0.63
RPE-202ENST00000359429 GNEQ9Y223 722 aaKnown RBP11.15□□□□□ -0.63
RPE-202ENST00000359429 A0A0A0MRY4 1105 aa11.14□□□□□ -0.63
RPE-202ENST00000359429 IGKV6-21A0A0C4DH24 114 aa11.14□□□□□ -0.63
RPE-202ENST00000359429 FAM200BP0CF97 657 aa11.14□□□□□ -0.63
RPE-202ENST00000359429 PGAM1P18669 254 aa11.14□□□□□ -0.63
RPE-202ENST00000359429 MPSTP25325 297 aa11.14□□□□□ -0.63
RPE-202ENST00000359429 EPHA3P29320 983 aa11.14□□□□□ -0.63
RPE-202ENST00000359429 CLCN3P51790 818 aa11.14□□□□□ -0.63
RPE-202ENST00000359429 FLOT2Q14254 428 aa11.14□□□□□ -0.63
RPE-202ENST00000359429 MXD4Q14582 209 aaPredicted RBP11.14□□□□□ -0.63
RPE-202ENST00000359429 HSDL1Q3SXM5 330 aa11.14□□□□□ -0.63
RPE-202ENST00000359429 PIGGQ5H8A4 983 aa11.14□□□□□ -0.63
RPE-202ENST00000359429 FSCBQ5H9T9 825 aa11.14□□□□□ -0.63
RPE-202ENST00000359429 TMEM198Q66K66 360 aa11.14□□□□□ -0.63
RPE-202ENST00000359429 C4orf22Q6V702 233 aa11.14□□□□□ -0.63
RPE-202ENST00000359429 TP53INP2Q8IXH6 220 aa11.14□□□□□ -0.63
RPE-202ENST00000359429 TDRD5Q8NAT2 981 aaKnown RBP11.14□□□□□ -0.63
RPE-202ENST00000359429 ITFG2Q969R8 447 aa11.14□□□□□ -0.63
RPE-202ENST00000359429 SPATA13Q96N96 652 aa11.14□□□□□ -0.63
RPE-202ENST00000359429 PHF12Q96QT6 1004 aa11.14□□□□□ -0.63
RPE-202ENST00000359429 AGAP2Q99490 1192 aa11.14□□□□□ -0.63
RPE-202ENST00000359429 FAM96AQ9H5X1 160 aa11.14□□□□□ -0.63
RPE-202ENST00000359429 TCF7L2Q9NQB0 619 aa11.14□□□□□ -0.63
RPE-202ENST00000359429 MORF4L1Q9UBU8 362 aa11.14□□□□□ -0.63
RPE-202ENST00000359429 RAB26Q9ULW5 256 aa11.14□□□□□ -0.63
RPE-202ENST00000359429 AP4E1Q9UPM8 1137 aa11.14□□□□□ -0.63
RPE-202ENST00000359429 RLFQ13129 1914 aa11.14□□□□□ -0.63
RPE-202ENST00000359429 H3BSA7 217 aa11.14□□□□□ -0.63
RPE-202ENST00000359429 CFLARO15519 480 aa11.14□□□□□ -0.63
RPE-202ENST00000359429 TMCC1O94876 653 aa11.14□□□□□ -0.63
RPE-202ENST00000359429 CDK4P11802 303 aa11.14□□□□□ -0.63
RPE-202ENST00000359429 PTPRAP18433 802 aa11.14□□□□□ -0.63
RPE-202ENST00000359429 MX2P20592 715 aa11.14□□□□□ -0.63
RPE-202ENST00000359429 PSMB4P28070 264 aa11.14□□□□□ -0.63
RPE-202ENST00000359429 SLC5A2P31639 672 aa11.14□□□□□ -0.63
RPE-202ENST00000359429 HPCAP84074 193 aa11.14□□□□□ -0.63
RPE-202ENST00000359429 MBTD1Q05BQ5 628 aa11.14□□□□□ -0.63
RPE-202ENST00000359429 INCA1Q0VD86 236 aa11.14□□□□□ -0.63
RPE-202ENST00000359429 SLC10A6Q3KNW5 377 aa11.14□□□□□ -0.63
RPE-202ENST00000359429 LSM12Q3MHD2 195 aaKnown RBP11.14□□□□□ -0.63
RPE-202ENST00000359429 PKDCCQ504Y2 493 aa11.14□□□□□ -0.63
RPE-202ENST00000359429 FAM156AQ8NDB6 213 aa11.14□□□□□ -0.63
RPE-202ENST00000359429 SEPT1Q8WYJ6 367 aa11.14□□□□□ -0.63
RPE-202ENST00000359429 LRGUKQ96M69 825 aa11.14□□□□□ -0.63
RPE-202ENST00000359429 KLHL32Q96NJ5 620 aa11.14□□□□□ -0.63
RPE-202ENST00000359429 GATA5Q9BWX5 397 aaPredicted RBP11.14□□□□□ -0.63
RPE-202ENST00000359429 CYP3A43Q9HB55 503 aa11.14□□□□□ -0.63
RPE-202ENST00000359429 TMPRSS4Q9NRS4 437 aa11.14□□□□□ -0.63
RPE-202ENST00000359429 CDY2AQ9Y6F7 541 aa11.14□□□□□ -0.63
RPE-202ENST00000359429 CDY1Q9Y6F8 540 aa11.14□□□□□ -0.63
RPE-202ENST00000359429 RPS6KL1Q9Y6S9 549 aa11.14□□□□□ -0.63
RPE-202ENST00000359429 SPDYE16A6NNV3 312 aaPredicted RBP11.13□□□□□ -0.63
RPE-202ENST00000359429 HCRTO43612 131 aa11.13□□□□□ -0.63
RPE-202ENST00000359429 USP12O75317 370 aa11.13□□□□□ -0.63
RPE-202ENST00000359429 IL18RAPO95256 599 aa11.13□□□□□ -0.63
RPE-202ENST00000359429 ARIH2O95376 493 aa11.13□□□□□ -0.63
RPE-202ENST00000359429 JUNP05412 331 aaKnown RBP11.13□□□□□ -0.63
RPE-202ENST00000359429 MLNP12872 115 aa11.13□□□□□ -0.63
RPE-202ENST00000359429 GP5P40197 560 aa11.13□□□□□ -0.63
RPE-202ENST00000359429 MAGEA12P43365 314 aa11.13□□□□□ -0.63
RPE-202ENST00000359429 PHKA2P46019 1235 aa11.13□□□□□ -0.63
RPE-202ENST00000359429 APOFQ13790 326 aa11.13□□□□□ -0.63
RPE-202ENST00000359429 PDK1Q15118 436 aa11.13□□□□□ -0.63
RPE-202ENST00000359429 FAM160B1Q5W0V3 765 aa11.13□□□□□ -0.63
RPE-202ENST00000359429 FSTL4Q6MZW2 842 aa11.13□□□□□ -0.63
RPE-202ENST00000359429 AMIGO2Q86SJ2 522 aa11.13□□□□□ -0.63
RPE-202ENST00000359429 ACOT1Q86TX2 421 aa11.13□□□□□ -0.63
RPE-202ENST00000359429 KYQ8NBH2 561 aa11.13□□□□□ -0.63
RPE-202ENST00000359429 BHLHE22Q8NFJ8 381 aaPredicted RBP11.13□□□□□ -0.63
RPE-202ENST00000359429 SLC35F5Q8WV83 523 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms