RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 CYB5R4Q7L1T6 521 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 RASGRP4Q8TDF6 673 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 PPP3R2Q96LZ3 170 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 NUDT12Q9BQG2 462 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 CHID1Q9BWS9 393 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 WDR41Q9HAD4 459 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 MORF4L1Q9UBU8 362 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 KLF11O14901 512 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 ELAVL2Q12926 359 aaKnown RBP6.7□□□□□ -1.34
VPS13B-202ENST00000357162 GTF2H3Q13889 308 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 DRICH1Q6PGQ1 229 aaPredicted RBP6.7□□□□□ -1.34
VPS13B-202ENST00000357162 FAM126BQ8IXS8 530 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 GMCL1P1Q8NEA9 526 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 L3MBTL3Q96JM7 780 aaPredicted RBP6.7□□□□□ -1.34
VPS13B-202ENST00000357162 HTATIP2Q9BUP3 242 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 THUMPD3Q9BV44 507 aaKnown RBP6.7□□□□□ -1.34
VPS13B-202ENST00000357162 SHROOM3Q8TF72 1996 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 NCAM1P13591 858 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 PSMD4P55036 377 aaKnown RBP6.7□□□□□ -1.34
VPS13B-202ENST00000357162 FKBP14Q9NWM8 211 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 IGSF9Q9P2J2 1179 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 FGF10O15520 208 aaPredicted RBP6.7□□□□□ -1.34
VPS13B-202ENST00000357162 ITGALP20701 1170 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 SDC2P34741 201 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 TIE1P35590 1138 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 EZH2Q15910 746 aaKnown RBP6.7□□□□□ -1.34
VPS13B-202ENST00000357162 CYP2U1Q7Z449 544 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 NKAPQ8N5F7 415 aaKnown RBP6.7□□□□□ -1.34
VPS13B-202ENST00000357162 ETNPPLQ8TBG4 499 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 TMEM117Q9H0C3 514 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.7□□□□□ -1.34
VPS13B-202ENST00000357162 ST14Q9Y5Y6 855 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 NAMPTP43490 491 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 HADHBP55084 474 aaKnown RBP6.7□□□□□ -1.34
VPS13B-202ENST00000357162 INPP4AQ96PE3 977 aaPredicted RBP6.7□□□□□ -1.34
VPS13B-202ENST00000357162 ENTPD7Q9NQZ7 604 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 DNAJC28Q9NX36 388 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 TBX20Q9UMR3 447 aa6.7□□□□□ -1.34
VPS13B-202ENST00000357162 F8W810 466 aa6.69□□□□□ -1.34
VPS13B-202ENST00000357162 AXIN1O15169 862 aa6.69□□□□□ -1.34
VPS13B-202ENST00000357162 CSDE1O75534 798 aaKnown RBP6.69□□□□□ -1.34
VPS13B-202ENST00000357162 ZNF605Q86T29 641 aa6.69□□□□□ -1.34
VPS13B-202ENST00000357162 MNTQ99583 582 aa6.69□□□□□ -1.34
VPS13B-202ENST00000357162 ADGRE3Q9BY15 652 aa6.69□□□□□ -1.34
VPS13B-202ENST00000357162 SENP6Q9GZR1 1112 aaPredicted RBP6.69□□□□□ -1.34
VPS13B-202ENST00000357162 OLA1Q9NTK5 396 aaKnown RBP6.69□□□□□ -1.34
VPS13B-202ENST00000357162 SPATA31A6Q5VVP1 1343 aa6.69□□□□□ -1.34
VPS13B-202ENST00000357162 A0A088AWK7 358 aa6.69□□□□□ -1.34
VPS13B-202ENST00000357162 RPN2P04844 631 aa6.69□□□□□ -1.34
VPS13B-202ENST00000357162 ZNF10P21506 573 aaPredicted RBP6.69□□□□□ -1.34
VPS13B-202ENST00000357162 S100GP29377 79 aa6.69□□□□□ -1.34
VPS13B-202ENST00000357162 LRPAP1P30533 357 aa6.69□□□□□ -1.34
VPS13B-202ENST00000357162 CAPZA1P52907 286 aa6.69□□□□□ -1.34
VPS13B-202ENST00000357162 NME5P56597 212 aa6.69□□□□□ -1.34
VPS13B-202ENST00000357162 NKD2Q969F2 451 aaPredicted RBP6.69□□□□□ -1.34
VPS13B-202ENST00000357162 IRX2Q9BZI1 471 aaPredicted RBP6.69□□□□□ -1.34
VPS13B-202ENST00000357162 STK32BQ9NY57 414 aa6.69□□□□□ -1.34
VPS13B-202ENST00000357162 WBP4O75554 376 aaKnown RBP6.69□□□□□ -1.34
VPS13B-202ENST00000357162 ATP5F1P24539 256 aaPredicted RBP6.69□□□□□ -1.34
VPS13B-202ENST00000357162 NOTUMQ6P988 496 aa6.69□□□□□ -1.34
VPS13B-202ENST00000357162 DHFRP00374 187 aa6.69□□□□□ -1.34
VPS13B-202ENST00000357162 PGK2P07205 417 aa6.69□□□□□ -1.34
VPS13B-202ENST00000357162 SLC26A3P40879 764 aa6.69□□□□□ -1.34
VPS13B-202ENST00000357162 PKN1Q16512 942 aa6.69□□□□□ -1.34
VPS13B-202ENST00000357162 DCP1BQ8IZD4 617 aaKnown RBP6.69□□□□□ -1.34
VPS13B-202ENST00000357162 PGAM4Q8N0Y7 254 aa6.69□□□□□ -1.34
VPS13B-202ENST00000357162 CD274Q9NZQ7 290 aa6.69□□□□□ -1.34
VPS13B-202ENST00000357162 LNPEPQ9UIQ6 1025 aa6.69□□□□□ -1.34
VPS13B-202ENST00000357162 LSM7Q9UK45 103 aaKnown RBP6.69□□□□□ -1.34
VPS13B-202ENST00000357162 G3BP2Q9UN86 482 aaKnown RBP6.69□□□□□ -1.34
VPS13B-202ENST00000357162 TBC1D30Q9Y2I9 924 aa6.69□□□□□ -1.34
VPS13B-202ENST00000357162 PI4K2BG5E9Z4 385 aa6.69□□□□□ -1.34
VPS13B-202ENST00000357162 SLC16A4O15374 487 aa6.69□□□□□ -1.34
VPS13B-202ENST00000357162 ETS1P14921 441 aa6.69□□□□□ -1.34
VPS13B-202ENST00000357162 ATG16L2Q8NAA4 619 aa6.69□□□□□ -1.34
VPS13B-202ENST00000357162 TEFMQ96QE5 360 aaKnown RBP6.69□□□□□ -1.34
VPS13B-202ENST00000357162 ZNF670Q9BS34 389 aa6.69□□□□□ -1.34
VPS13B-202ENST00000357162 SEMA4AQ9H3S1 761 aa6.69□□□□□ -1.34
VPS13B-202ENST00000357162 LEF1Q9UJU2 399 aaPredicted RBP6.69□□□□□ -1.34
VPS13B-202ENST00000357162 PCDHGA10Q9Y5H3 936 aa6.69□□□□□ -1.34
VPS13B-202ENST00000357162 LMO7Q8WWI1 1683 aa6.69□□□□□ -1.34
VPS13B-202ENST00000357162 NFE2Q16621 373 aaPredicted RBP6.69□□□□□ -1.34
VPS13B-202ENST00000357162 DPY19L1Q2PZI1 675 aa6.69□□□□□ -1.34
VPS13B-202ENST00000357162 TXNDC11Q6PKC3 985 aa6.69□□□□□ -1.34
VPS13B-202ENST00000357162 RNASE11Q8TAA1 199 aaKnown RBP6.69□□□□□ -1.34
VPS13B-202ENST00000357162 MDM1Q8TC05 714 aa6.69□□□□□ -1.34
VPS13B-202ENST00000357162 KIAA1683Q9H0B3 1180 aa6.69□□□□□ -1.34
VPS13B-202ENST00000357162 ZNF446Q9NWS9 450 aa6.69□□□□□ -1.34
VPS13B-202ENST00000357162 NARFQ9UHQ1 456 aa6.69□□□□□ -1.34
VPS13B-202ENST00000357162 SALL3Q9BXA9 1300 aa6.69□□□□□ -1.34
VPS13B-202ENST00000357162 USP17L5A8MUK1 530 aa6.69□□□□□ -1.34
VPS13B-202ENST00000357162 PSMD12O00232 456 aaPredicted RBP6.69□□□□□ -1.34
VPS13B-202ENST00000357162 EEF2KO00418 725 aaKnown RBP6.69□□□□□ -1.34
VPS13B-202ENST00000357162 ADAMDEC1O15204 470 aa6.69□□□□□ -1.34
VPS13B-202ENST00000357162 LRIG2O94898 1065 aa6.69□□□□□ -1.34
VPS13B-202ENST00000357162 SRPRAP08240 638 aaKnown RBP6.69□□□□□ -1.34
VPS13B-202ENST00000357162 PRR29P0C7W0 189 aa6.69□□□□□ -1.34
VPS13B-202ENST00000357162 NFIL3Q16649 462 aa6.69□□□□□ -1.34
VPS13B-202ENST00000357162 CXXC5Q7LFL8 322 aaKnown RBP6.69□□□□□ -1.34
VPS13B-202ENST00000357162 GRIP2Q9C0E4 1043 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms